RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 WDR82Q6UXN9 313 aa18.27■□□□□ 0.52
USP6NL-204ENST00000606752 GALNT11Q8NCW6 608 aa18.27■□□□□ 0.52
USP6NL-204ENST00000606752 OR5AP2Q8NGF4 316 aa18.27■□□□□ 0.52
USP6NL-204ENST00000606752 DYRK2Q92630 601 aa18.27■□□□□ 0.52
USP6NL-204ENST00000606752 BEX2Q9BXY8 128 aa18.27■□□□□ 0.52
USP6NL-204ENST00000606752 BEX1Q9HBH7 125 aa18.27■□□□□ 0.52
USP6NL-204ENST00000606752 C12orf4Q9NQ89 552 aa18.27■□□□□ 0.52
USP6NL-204ENST00000606752 UFSP2Q9NUQ7 469 aa18.27■□□□□ 0.52
USP6NL-204ENST00000606752 MCRIP1C9JLW8 97 aa18.26■□□□□ 0.51
USP6NL-204ENST00000606752 CHRFAM7AQ494W8 412 aa18.26■□□□□ 0.51
USP6NL-204ENST00000606752 ARRDC1Q8N5I2 433 aa18.26■□□□□ 0.51
USP6NL-204ENST00000606752 OR13C8Q8NGS7 320 aa18.26■□□□□ 0.51
USP6NL-204ENST00000606752 LINC01560Q8TB33 94 aa18.26■□□□□ 0.51
USP6NL-204ENST00000606752 VSTM5A8MXK1 200 aa18.26■□□□□ 0.51
USP6NL-204ENST00000606752 DEGS1O15121 323 aa18.26■□□□□ 0.51
USP6NL-204ENST00000606752 CCNKO75909 580 aa18.26■□□□□ 0.51
USP6NL-204ENST00000606752 RLN1P04808 185 aa18.26■□□□□ 0.51
USP6NL-204ENST00000606752 GRNP28799 593 aaKnown RBP18.26■□□□□ 0.51
USP6NL-204ENST00000606752 ZNF81P51508 661 aa18.26■□□□□ 0.51
USP6NL-204ENST00000606752 SNTB1Q13884 538 aaKnown RBP18.26■□□□□ 0.51
USP6NL-204ENST00000606752 ZNF146Q15072 292 aa18.26■□□□□ 0.51
USP6NL-204ENST00000606752 ADIPOQQ15848 244 aa18.26■□□□□ 0.51
USP6NL-204ENST00000606752 ADAM5Q6NVV9 412 aa18.26■□□□□ 0.51
USP6NL-204ENST00000606752 Q6P435 159 aa18.26■□□□□ 0.51
USP6NL-204ENST00000606752 SUMF2Q8NBJ7 301 aa18.26■□□□□ 0.51
USP6NL-204ENST00000606752 MED30Q96HR3 178 aa18.26■□□□□ 0.51
USP6NL-204ENST00000606752 PLCE1Q9P212 2302 aa18.25■□□□□ 0.51
USP6NL-204ENST00000606752 IGKV1D-8A0A087WSZ0 117 aa18.25■□□□□ 0.51
USP6NL-204ENST00000606752 TRAV24A0A0B4J272 114 aa18.25■□□□□ 0.51
USP6NL-204ENST00000606752 SPRY3O43610 288 aa18.25■□□□□ 0.51
USP6NL-204ENST00000606752 OR4A8P0C604 315 aa18.25■□□□□ 0.51
USP6NL-204ENST00000606752 ANXA7P20073 488 aaKnown RBP18.25■□□□□ 0.51
USP6NL-204ENST00000606752 RRAS2P62070 204 aaPredicted RBP18.25■□□□□ 0.51
USP6NL-204ENST00000606752 SPIN3Q5JUX0 258 aa18.25■□□□□ 0.51
USP6NL-204ENST00000606752 METTL11BQ5VVY1 283 aa18.25■□□□□ 0.51
USP6NL-204ENST00000606752 FIP1L1Q6UN15 594 aaKnown RBP18.25■□□□□ 0.51
USP6NL-204ENST00000606752 PLPPR2Q96GM1 343 aa18.25■□□□□ 0.51
USP6NL-204ENST00000606752 OR51J1Q9H342 316 aa18.25■□□□□ 0.51
USP6NL-204ENST00000606752 ANXA10Q9UJ72 324 aa18.25■□□□□ 0.51
USP6NL-204ENST00000606752 FAM221AA4D161 298 aa18.24■□□□□ 0.51
USP6NL-204ENST00000606752 IL5P05113 134 aa18.24■□□□□ 0.51
USP6NL-204ENST00000606752 ZNF44P15621 663 aa18.24■□□□□ 0.51
USP6NL-204ENST00000606752 GMFBP60983 142 aa18.24■□□□□ 0.51
USP6NL-204ENST00000606752 TSPAN5P62079 268 aa18.24■□□□□ 0.51
USP6NL-204ENST00000606752 RBM39Q14498 530 aaKnown RBP18.24■□□□□ 0.51
USP6NL-204ENST00000606752 C4orf17Q53FE4 359 aa18.24■□□□□ 0.51
USP6NL-204ENST00000606752 NEK7Q8TDX7 302 aa18.24■□□□□ 0.51
USP6NL-204ENST00000606752 MEGF10Q96KG7 1140 aa18.24■□□□□ 0.51
USP6NL-204ENST00000606752 OR2V2Q96R30 315 aa18.24■□□□□ 0.51
USP6NL-204ENST00000606752 C1orf123Q9NWV4 160 aa18.24■□□□□ 0.51
USP6NL-204ENST00000606752 ZDHHC8Q9ULC8 765 aa18.24■□□□□ 0.51
USP6NL-204ENST00000606752 DIDO1Q9BTC0 2240 aaKnown RBP18.24■□□□□ 0.51
USP6NL-204ENST00000606752 hCG_1807616A0A1W2PRN6 198 aa18.23■□□□□ 0.51
USP6NL-204ENST00000606752 SHISA9B4DS77 424 aa18.23■□□□□ 0.51
USP6NL-204ENST00000606752 BOLA2-SMG1P6H3BVE0 249 aa18.23■□□□□ 0.51
USP6NL-204ENST00000606752 HS3ST1O14792 307 aa18.23■□□□□ 0.51
USP6NL-204ENST00000606752 SH2D1BO14796 132 aa18.23■□□□□ 0.51
USP6NL-204ENST00000606752 CFHR2P36980 270 aa18.23■□□□□ 0.51
USP6NL-204ENST00000606752 CBX3Q13185 183 aa18.23■□□□□ 0.51
USP6NL-204ENST00000606752 ST3GAL2Q16842 350 aa18.23■□□□□ 0.51
USP6NL-204ENST00000606752 GLDNQ6ZMI3 551 aaPredicted RBP18.23■□□□□ 0.51
USP6NL-204ENST00000606752 OVCH2Q7RTZ1 564 aa18.23■□□□□ 0.51
USP6NL-204ENST00000606752 TMEM17Q86X19 198 aa18.23■□□□□ 0.51
USP6NL-204ENST00000606752 OR6F1Q8NGZ6 308 aa18.23■□□□□ 0.51
USP6NL-204ENST00000606752 TERB2Q8NHR7 220 aa18.23■□□□□ 0.51
USP6NL-204ENST00000606752 RDH5Q92781 318 aa18.23■□□□□ 0.51
USP6NL-204ENST00000606752 DACT3Q96B18 629 aaPredicted RBP18.23■□□□□ 0.51
USP6NL-204ENST00000606752 DPCDQ9BVM2 203 aaPredicted RBP18.23■□□□□ 0.51
USP6NL-204ENST00000606752 ALX4Q9H161 411 aaPredicted RBP18.23■□□□□ 0.51
USP6NL-204ENST00000606752 PPA2Q9H2U2 334 aa18.23■□□□□ 0.51
USP6NL-204ENST00000606752 TMEM82A0PJX8 343 aa18.23■□□□□ 0.51
USP6NL-204ENST00000606752 TUBAL3A6NHL2 446 aa18.23■□□□□ 0.51
USP6NL-204ENST00000606752 HSPB6O14558 160 aa18.23■□□□□ 0.51
USP6NL-204ENST00000606752 GNLYP22749 145 aa18.23■□□□□ 0.51
USP6NL-204ENST00000606752 GLRA1P23415 457 aa18.23■□□□□ 0.51
USP6NL-204ENST00000606752 ARPC4P59998 168 aa18.23■□□□□ 0.51
USP6NL-204ENST00000606752 CDK10Q15131 360 aa18.23■□□□□ 0.51
USP6NL-204ENST00000606752 GRK1Q15835 563 aa18.23■□□□□ 0.51
USP6NL-204ENST00000606752 SLC36A1Q7Z2H8 476 aa18.23■□□□□ 0.51
USP6NL-204ENST00000606752 MED28Q9H204 178 aa18.23■□□□□ 0.51
USP6NL-204ENST00000606752 CHMP1AQ9HD42 196 aaPredicted RBP18.23■□□□□ 0.51
USP6NL-204ENST00000606752 EHFQ9NZC4 300 aa18.23■□□□□ 0.51
USP6NL-204ENST00000606752 ADGRG4Q8IZF6 3080 aa18.22■□□□□ 0.51
USP6NL-204ENST00000606752 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.22■□□□□ 0.51
USP6NL-204ENST00000606752 OR2AT4A6NND4 320 aa18.22■□□□□ 0.51
USP6NL-204ENST00000606752 WNT9BO14905 357 aa18.22■□□□□ 0.51
USP6NL-204ENST00000606752 OR2H2O95918 312 aa18.22■□□□□ 0.51
USP6NL-204ENST00000606752 NAPSAO96009 420 aa18.22■□□□□ 0.51
USP6NL-204ENST00000606752 IGHV1-46P01743 117 aa18.22■□□□□ 0.51
USP6NL-204ENST00000606752 HPXP02790 462 aa18.22■□□□□ 0.51
USP6NL-204ENST00000606752 CD3EP07766 207 aa18.22■□□□□ 0.51
USP6NL-204ENST00000606752 SRSF7Q16629 238 aaKnown RBP eCLIP18.22■□□□□ 0.51
USP6NL-204ENST00000606752 ACP7Q6ZNF0 438 aa18.22■□□□□ 0.51
USP6NL-204ENST00000606752 DMRTC2Q8IXT2 367 aaPredicted RBP18.22■□□□□ 0.51
USP6NL-204ENST00000606752 OR10Z1Q8NGY1 313 aa18.22■□□□□ 0.51
USP6NL-204ENST00000606752 MRGPRFQ96AM1 343 aa18.22■□□□□ 0.51
USP6NL-204ENST00000606752 WDR13Q9H1Z4 485 aa18.22■□□□□ 0.51
USP6NL-204ENST00000606752 RIMS4Q9H426 269 aaPredicted RBP18.22■□□□□ 0.51
USP6NL-204ENST00000606752 ZNF286AQ9HBT8 521 aa18.22■□□□□ 0.51
USP6NL-204ENST00000606752 GPN1Q9HCN4 374 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms