RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 GATA3P23771 443 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 P2RX1P51575 399 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 RRADP55042 308 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 WNT3AP56704 352 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 RAB38P57729 211 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 ERVPABLB-1P60509 514 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 GNG3P63215 75 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 SELENOWP63302 87 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 RAE1P78406 368 aaKnown RBP4.12□□□□□ -1.75
LINC01109-201ENST00000603837 BTN3A2P78410 334 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 CCL7P80098 99 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 PAX2Q02962 417 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 COL10A1Q03692 680 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 RGNQ15493 299 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 MIDNQ504T8 468 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 PMS2CLQ68D20 193 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 OR4A47Q6IF82 309 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 TMPRSS11BQ86T26 416 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 DND1Q8IYX4 353 aaKnown RBP4.12□□□□□ -1.75
LINC01109-201ENST00000603837 MDS2Q8NDY4 140 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 OR4C16Q8NGL9 310 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 OR4X1Q8NH49 305 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 OR5K2Q8NHB8 316 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 ABHD4Q8TB40 342 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 STAG3L4Q8TBR4 150 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 PELI1Q96FA3 418 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 SDSLQ96GA7 329 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 HIST1H2AAQ96QV6 131 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 VAMP8Q9BV40 100 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 SLC17A9Q9BYT1 436 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 OR11A1Q9GZK7 315 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 POLR2J3Q9H1A7 115 aaKnown RBP4.12□□□□□ -1.75
LINC01109-201ENST00000603837 LYRM2Q9NU23 88 aaPredicted RBP4.12□□□□□ -1.75
LINC01109-201ENST00000603837 ELOVL5Q9NYP7 299 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 TAS2R13Q9NYV9 303 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 ZNF391Q9UJN7 358 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 SLC7A7Q9UM01 511 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 LAMTOR2Q9Y2Q5 125 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 CSAG2Q9Y5P2 127 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 PRRC2BQ5JSZ5 2229 aaKnown RBP4.12□□□□□ -1.75
LINC01109-201ENST00000603837 TRIP12Q14669 1992 aaPredicted RBP4.12□□□□□ -1.75
LINC01109-201ENST00000603837 H3BQ15 152 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 FGF17O60258 216 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 S1PR2O95136 353 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 TNFSF15O95150 251 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 PPP1R3DO95685 299 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 WNT2P09544 360 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 GPX2P18283 190 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 CSNK2A2P19784 350 aaPredicted RBP4.12□□□□□ -1.75
LINC01109-201ENST00000603837 PNPLA4P41247 253 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 DAP3P51398 398 aaKnown RBP4.12□□□□□ -1.75
LINC01109-201ENST00000603837 CRYBA2P53672 197 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 HIST1H3AP68431 136 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 RHOGP84095 191 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 ENDOGQ14249 297 aaKnown RBP4.12□□□□□ -1.75
LINC01109-201ENST00000603837 IL13RA2Q14627 380 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 OR1Q1Q15612 314 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 NRN1LQ496H8 165 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 SLC25A30Q5SVS4 291 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 TMEM69Q5SWH9 247 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 ARL9Q6T311 187 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 NIT1Q86X76 327 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 UEVLDQ8IX04 471 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 PNPLA1Q8N8W4 532 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 NECAP1Q8NC96 275 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 NOXO1Q8NFA2 376 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 SLC26A10Q8NG04 563 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 OR1K1Q8NGR3 316 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 GEMIN6Q8WXD5 167 aaKnown RBP4.12□□□□□ -1.75
LINC01109-201ENST00000603837 FLYWCH2Q96CP2 140 aaKnown RBP4.12□□□□□ -1.75
LINC01109-201ENST00000603837 ZG16BQ96DA0 208 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 SPAG8Q99932 426 aaPredicted RBP4.12□□□□□ -1.75
LINC01109-201ENST00000603837 TBL1YQ9BQ87 522 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 PECRQ9BY49 303 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 TAS2R8Q9NYW2 309 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 ABI3Q9P2A4 366 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 ZNF319Q9P2F9 582 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 TBX21Q9UL17 535 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 PSG8Q9UQ74 426 aa4.12□□□□□ -1.75
LINC01109-201ENST00000603837 SMIM9A6NGZ8 99 aa4.11□□□□□ -1.75
LINC01109-201ENST00000603837 ZNF860A6NHJ4 632 aa4.11□□□□□ -1.75
LINC01109-201ENST00000603837 LEFTY2O00292 366 aa4.11□□□□□ -1.75
LINC01109-201ENST00000603837 GAPDHSO14556 408 aaPredicted RBP4.11□□□□□ -1.75
LINC01109-201ENST00000603837 MPIG6BO95866 241 aa4.11□□□□□ -1.75
LINC01109-201ENST00000603837 H1F0P07305 194 aaKnown RBP4.11□□□□□ -1.75
LINC01109-201ENST00000603837 DBHP09172 617 aa4.11□□□□□ -1.75
LINC01109-201ENST00000603837 OR10J4P0C629 311 aa4.11□□□□□ -1.75
LINC01109-201ENST00000603837 PPIAL4GP0DN37 164 aa4.11□□□□□ -1.75
LINC01109-201ENST00000603837 PTHLHP12272 177 aa4.11□□□□□ -1.75
LINC01109-201ENST00000603837 MDKP21741 143 aaPredicted RBP4.11□□□□□ -1.75
LINC01109-201ENST00000603837 CTGFP29279 349 aa4.11□□□□□ -1.75
LINC01109-201ENST00000603837 XCR1P46094 333 aa4.11□□□□□ -1.75
LINC01109-201ENST00000603837 GLIPR1P48060 266 aa4.11□□□□□ -1.75
LINC01109-201ENST00000603837 DNASE1L1P49184 302 aa4.11□□□□□ -1.75
LINC01109-201ENST00000603837 HNRNPA3P51991 378 aaKnown RBP4.11□□□□□ -1.75
LINC01109-201ENST00000603837 HMGA2P52926 109 aa4.11□□□□□ -1.75
LINC01109-201ENST00000603837 TLE3Q04726 772 aa4.11□□□□□ -1.75
LINC01109-201ENST00000603837 PRR31Q5SQ13 230 aa4.11□□□□□ -1.75
LINC01109-201ENST00000603837 GLB1LQ6UWU2 654 aa4.11□□□□□ -1.75
LINC01109-201ENST00000603837 TMEM173Q86WV6 379 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms