RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 EIF4EBP3O60516 100 aaPredicted RBP4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 S1PR2O95136 353 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 NDUFA7O95182 113 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 EML2O95834 649 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 SEMG1P04279 462 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 IGF1P05019 195 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 ESDP10768 282 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 CD1DP15813 335 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 HOXB9P17482 250 aaPredicted RBP4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 DUSP1P28562 367 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 OR10J1P30954 320 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 AVPR1BP47901 424 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 RAB10P61026 200 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 SRYQ05066 204 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 SRSF4Q08170 494 aaKnown RBP4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 TCF15Q12870 199 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 TBR1Q16650 682 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 SYT14P1Q58G82 188 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 COA6Q5JTJ3 125 aaKnown RBP4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 TPTE2P1Q5T6R2 138 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 SLC23A3Q6PIS1 610 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 TEPPQ6URK8 271 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 RPS27LQ71UM5 84 aaKnown RBP4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 MMD2Q8IY49 270 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 LGI3Q8N145 548 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 ZFP41Q8N8Y5 198 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 SLC26A10Q8NG04 563 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 OR51Q1Q8NH59 317 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 ZNF503Q96F45 646 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 OR7D2Q96RA2 312 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 LYSMD1Q96S90 227 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 MRPL57Q9BQC6 102 aaKnown RBP4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 EGLN3Q9H6Z9 239 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 TAS2R5Q9NYW4 299 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 C1RLQ9NZP8 487 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 VAX2Q9UIW0 290 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 SNX10Q9Y5X0 201 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 CEP350Q5VT06 3117 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 PDE4DIPQ5VU43 2346 aa4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 TNRC18O15417 2968 aaPredicted RBP4.33□□□□□ -1.72
SPTBN1-206ENST00000602898 IGLV3-22A0A075B6J6 115 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 KIR2DS1A0A191URI9 304 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 ASPDHA6ND91 283 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 NAP1L6A6NFF2 107 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 PRKNO60260 465 aaPredicted RBP4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 STK16O75716 305 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 ATP5LO75964 103 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 RAB36O95755 333 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 MT-CO2P00403 227 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 HPNP05981 417 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 ADRA2AP08913 450 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 HIST1H1EP10412 219 aaKnown RBP4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 TFPIP10646 304 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 P2RY1P47900 373 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 PPOXP50336 477 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 DVL1P1P54792 670 aaPredicted RBP4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 ZNF763Q0D2J5 394 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 KIR2DS1Q14954 304 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 SNAI3Q3KNW1 292 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 PAGE3Q5JUK9 113 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 TMEM205Q6UW68 189 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 DHRS11Q6UWP2 260 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 PGBD5Q8N414 524 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 OR52P1PQ8NH57 321 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 ADAMTS17Q8TE56 1095 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 RNF138Q8WVD3 245 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 ZBTB8AQ96BR9 441 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 MUCL1Q96DR8 90 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 OR10C1Q96KK4 312 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 MRPL45Q9BRJ2 306 aaKnown RBP4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 PBDC1Q9BVG4 233 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 ZBP1Q9H171 429 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 SH2D2AQ9NP31 389 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 LYRM2Q9NU23 88 aaPredicted RBP4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 C19orf73Q9NVV2 129 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 ASF1AQ9Y294 204 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 SLC17A4Q9Y2C5 497 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 CENPVL1A0A0U1RR11 272 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 CENPVL3A0A0U1RRI6 287 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 EEF1E1O43324 174 aaKnown RBP4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 OR7C2O60412 319 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 TNFSF13O75888 250 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 TRGC1P0CF51 173 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 REG1BP48304 166 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 POLR2HP52434 150 aaKnown RBP4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 DIO3P55073 304 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 CDK5Q00535 292 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 PNRC1Q12796 327 aaPredicted RBP4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 PPP1R1AQ13522 171 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 GINS1Q14691 196 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 SPHARQ15513 63 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 NSDHLQ15738 373 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 BATFQ16520 125 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 C4orf26Q17RF5 130 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 CCSMST1Q4G0I0 132 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 FAM102AQ5T9C2 384 aaPredicted RBP4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 PRSS54Q6PEW0 395 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 CLEC20AQ6ZU45 233 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 DEFB128Q7Z7B8 93 aa4.32□□□□□ -1.72
SPTBN1-206ENST00000602898 LAS2Q8IYD9 372 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms