RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 SUPT4H1P63272 117 aaKnown RBP9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 DHODHQ02127 395 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 IKZF1Q13422 519 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 ACTBL2Q562R1 376 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 PEAR1Q5VY43 1037 aaPredicted RBP9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 TFAP2EQ6VUC0 442 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 CNEP1R1Q8N9A8 125 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 DEFB124Q8NES8 71 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 OR10Z1Q8NGY1 313 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 Q96M66 194 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 HS3ST6Q96QI5 342 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 OCSTAMPQ9BR26 566 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 TLNRD1Q9H1K6 362 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 ANXA10Q9UJ72 324 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 STARD10Q9Y365 291 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 F8VVB4 439 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 F8VWA3 439 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 ZNF14P17017 642 aaPredicted RBP9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 TBPP20226 339 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 OTX1P32242 354 aaPredicted RBP9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 ID4P47928 161 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 HERV-K104P61576 105 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 FLI1Q01543 452 aaPredicted RBP9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 LPCAT3Q6P1A2 487 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 IL1F10Q8WWZ1 152 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 SPSB1Q96BD6 273 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 C14orf79Q96F83 325 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 ADGRG7Q96K78 797 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 SLC25A32Q9H2D1 315 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 TMEM9BQ9NQ34 198 aa9.98□□□□□ -0.81
ARHGEF1-220ENST00000600274 ZNF816-ZNF321PA0A0X1KG74 233 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 ZNF732B4DXR9 585 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 PRSS44E7EML9 344 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 TNFSF12O43508 249 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 CYTIPO60759 359 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 ZNF728P0DKX0 622 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 SPP1P10451 314 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 CD37P11049 281 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 SELEP16581 610 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 BCL3P20749 454 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 LHX2P50458 406 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 VAX1Q5SQQ9 334 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 OR2T2Q6IF00 324 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 ETV3LQ6ZN32 361 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 LDLRAD3Q86YD5 345 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 KCNRGQ8N5I3 272 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 MRPL24Q96A35 216 aaKnown RBP9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 ISOC2Q96AB3 205 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 DCHS1Q96JQ0 3298 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 NKX2-8O15522 239 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 OR2F2O95006 317 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 IFNA2P01563 188 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 RCC1P18754 421 aaPredicted RBP9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 CTSSP25774 331 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 NPBWR1P48145 328 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 OR2B8PP59922 312 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 PRDX4Q13162 271 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 OR2F1Q13607 317 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 SLC10A1Q14973 349 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 PEA15Q15121 130 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 EIF5A2Q9GZV4 153 aaKnown RBP9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 BCO1Q9HAY6 547 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 ZNF107Q9UII5 783 aaPredicted RBP9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 PHF1O43189 567 aaPredicted RBP9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 IFNA21P01568 189 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 OR5AC1P0C628 307 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 TPT1P13693 172 aaKnown RBP9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 ABLIM2Q6H8Q1 611 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 ADAM5Q6NVV9 412 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 LHFPL2Q6ZUX7 228 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 ZPBPQ9BS86 351 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 RSRP1Q9BUV0 290 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 LIME1Q9H400 295 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 BIN3Q9NQY0 253 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 RASL12Q9NYN1 266 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 GHRLQ9UBU3 117 aa9.97□□□□□ -0.81
ARHGEF1-220ENST00000600274 TMEM218A2RU14 115 aa9.96□□□□□ -0.81
ARHGEF1-220ENST00000600274 TUBAL3A6NHL2 446 aa9.96□□□□□ -0.81
ARHGEF1-220ENST00000600274 FIGNL2A6NMB9 653 aa9.96□□□□□ -0.81
ARHGEF1-220ENST00000600274 IL2RAP01589 272 aa9.96□□□□□ -0.81
ARHGEF1-220ENST00000600274 CRYBA1P05813 215 aa9.96□□□□□ -0.81
ARHGEF1-220ENST00000600274 IDH3GP51553 393 aaPredicted RBP9.96□□□□□ -0.81
ARHGEF1-220ENST00000600274 ZNF133P52736 654 aaPredicted RBP9.96□□□□□ -0.81
ARHGEF1-220ENST00000600274 CLDN18P56856 261 aa9.96□□□□□ -0.81
ARHGEF1-220ENST00000600274 OR2A2Q6IF42 318 aa9.96□□□□□ -0.81
ARHGEF1-220ENST00000600274 RTN4IP1Q8WWV3 396 aaPredicted RBP9.96□□□□□ -0.81
ARHGEF1-220ENST00000600274 BCL2L14Q9BZR8 327 aa9.96□□□□□ -0.81
ARHGEF1-220ENST00000600274 PIGMQ9H3S5 423 aa9.96□□□□□ -0.81
ARHGEF1-220ENST00000600274 ESRP2Q9H6T0 727 aaKnown RBP9.96□□□□□ -0.81
ARHGEF1-220ENST00000600274 LUZP4Q9P127 313 aa9.96□□□□□ -0.81
ARHGEF1-220ENST00000600274 AUP1Q9Y679 476 aa9.96□□□□□ -0.81
ARHGEF1-220ENST00000600274 hCG_38984A0A1B0GV85 526 aa9.96□□□□□ -0.82
ARHGEF1-220ENST00000600274 LILRA1O75019 489 aa9.96□□□□□ -0.82
ARHGEF1-220ENST00000600274 LYZL6O75951 148 aa9.96□□□□□ -0.82
ARHGEF1-220ENST00000600274 CD8AP01732 235 aa9.96□□□□□ -0.82
ARHGEF1-220ENST00000600274 FCGR3AP08637 254 aa9.96□□□□□ -0.82
ARHGEF1-220ENST00000600274 GLP1RP43220 463 aa9.96□□□□□ -0.82
ARHGEF1-220ENST00000600274 FUT6P51993 359 aa9.96□□□□□ -0.82
ARHGEF1-220ENST00000600274 FAM89BQ8N5H3 189 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 254.4 ms