RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 MBOAT4Q96T53 435 aa12.33□□□□□ -0.44
LIG1-214ENST00000597146 FAM118AQ9NWS6 357 aa12.33□□□□□ -0.44
LIG1-214ENST00000597146 AASSQ9UDR5 926 aa12.33□□□□□ -0.44
LIG1-214ENST00000597146 RPL36Q9Y3U8 105 aaKnown RBP12.33□□□□□ -0.44
LIG1-214ENST00000597146 IGKV1D-17A0A075B6S4 117 aa12.32□□□□□ -0.44
LIG1-214ENST00000597146 J3QT63 122 aa12.32□□□□□ -0.44
LIG1-214ENST00000597146 SLC1A7O00341 560 aa12.32□□□□□ -0.44
LIG1-214ENST00000597146 SLC16A6O15403 523 aa12.32□□□□□ -0.44
LIG1-214ENST00000597146 INMTO95050 263 aa12.32□□□□□ -0.44
LIG1-214ENST00000597146 ARG1P05089 322 aa12.32□□□□□ -0.44
LIG1-214ENST00000597146 PRDX2P32119 198 aa12.32□□□□□ -0.44
LIG1-214ENST00000597146 FUT6P51993 359 aa12.32□□□□□ -0.44
LIG1-214ENST00000597146 OR12D2P58182 307 aa12.32□□□□□ -0.44
LIG1-214ENST00000597146 ACTA2P62736 377 aa12.32□□□□□ -0.44
LIG1-214ENST00000597146 ACTG2P63267 376 aa12.32□□□□□ -0.44
LIG1-214ENST00000597146 LRRC36Q1X8D7 754 aa12.32□□□□□ -0.44
LIG1-214ENST00000597146 KRT74Q7RTS7 529 aa12.32□□□□□ -0.44
LIG1-214ENST00000597146 ANGPTL5Q86XS5 388 aa12.32□□□□□ -0.44
LIG1-214ENST00000597146 RDH10Q8IZV5 341 aa12.32□□□□□ -0.44
LIG1-214ENST00000597146 ZNF676Q8N7Q3 588 aa12.32□□□□□ -0.44
LIG1-214ENST00000597146 OR51D1Q8NGF3 324 aa12.32□□□□□ -0.44
LIG1-214ENST00000597146 BORCS8Q96FH0 119 aa12.32□□□□□ -0.44
LIG1-214ENST00000597146 FGF23Q9GZV9 251 aaPredicted RBP12.32□□□□□ -0.44
LIG1-214ENST00000597146 NEK6Q9HC98 313 aa12.32□□□□□ -0.44
LIG1-214ENST00000597146 AMBNQ9NP70 447 aa12.32□□□□□ -0.44
LIG1-214ENST00000597146 ZMAT5Q9UDW3 170 aaKnown RBP12.32□□□□□ -0.44
LIG1-214ENST00000597146 OR14J1Q9UGF5 321 aa12.32□□□□□ -0.44
LIG1-214ENST00000597146 DSCAML1Q8TD84 2053 aa12.32□□□□□ -0.44
LIG1-214ENST00000597146 RYR1P21817 5038 aa12.32□□□□□ -0.44
LIG1-214ENST00000597146 A0A1W2PPH5 198 aa12.31□□□□□ -0.44
LIG1-214ENST00000597146 SH2D7A6NKC9 451 aaPredicted RBP12.31□□□□□ -0.44
LIG1-214ENST00000597146 RFPL4AA6NLU0 287 aa12.31□□□□□ -0.44
LIG1-214ENST00000597146 ODF3BA8MYP8 253 aa12.31□□□□□ -0.44
LIG1-214ENST00000597146 RFPL4AL1F8VTS6 287 aa12.31□□□□□ -0.44
LIG1-214ENST00000597146 RAMP3O60896 148 aa12.31□□□□□ -0.44
LIG1-214ENST00000597146 LPLP06858 475 aa12.31□□□□□ -0.44
LIG1-214ENST00000597146 PSG2P11465 335 aa12.31□□□□□ -0.44
LIG1-214ENST00000597146 CHATP28329 748 aa12.31□□□□□ -0.44
LIG1-214ENST00000597146 CEBPDP49716 269 aaPredicted RBP12.31□□□□□ -0.44
LIG1-214ENST00000597146 ATP1B3P54709 279 aa12.31□□□□□ -0.44
LIG1-214ENST00000597146 ZNF273Q14593 569 aa12.31□□□□□ -0.44
LIG1-214ENST00000597146 ZSCAN26Q16670 478 aa12.31□□□□□ -0.44
LIG1-214ENST00000597146 C8orf86Q6ZUL3 223 aa12.31□□□□□ -0.44
LIG1-214ENST00000597146 PRSS35Q8N3Z0 413 aa12.31□□□□□ -0.44
LIG1-214ENST00000597146 POC1AQ8NBT0 407 aa12.31□□□□□ -0.44
LIG1-214ENST00000597146 OR2G2Q8NGZ5 317 aa12.31□□□□□ -0.44
LIG1-214ENST00000597146 RHOXF1Q8NHV9 184 aa12.31□□□□□ -0.44
LIG1-214ENST00000597146 CYGBQ8WWM9 190 aa12.31□□□□□ -0.44
LIG1-214ENST00000597146 FGGYQ96C11 551 aa12.31□□□□□ -0.44
LIG1-214ENST00000597146 LGALS12Q96DT0 336 aa12.31□□□□□ -0.44
LIG1-214ENST00000597146 ZNF488Q96MN9 340 aa12.31□□□□□ -0.44
LIG1-214ENST00000597146 SMPD3Q9NY59 655 aaPredicted RBP12.31□□□□□ -0.44
LIG1-214ENST00000597146 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.31□□□□□ -0.44
LIG1-214ENST00000597146 ZNF222Q9UK12 451 aa12.31□□□□□ -0.44
LIG1-214ENST00000597146 EXOGQ9Y2C4 368 aaKnown RBP12.31□□□□□ -0.44
LIG1-214ENST00000597146 ALMS1Q8TCU4 4167 aa12.3□□□□□ -0.44
LIG1-214ENST00000597146 LOC107986453A0A1B0GWG9 222 aa12.3□□□□□ -0.44
LIG1-214ENST00000597146 PQLC2LA1A4F0 135 aa12.3□□□□□ -0.44
LIG1-214ENST00000597146 RPSAP08865 295 aaKnown RBP12.3□□□□□ -0.44
LIG1-214ENST00000597146 DBTP11182 482 aaKnown RBP12.3□□□□□ -0.44
LIG1-214ENST00000597146 CCL1P22362 96 aa12.3□□□□□ -0.44
LIG1-214ENST00000597146 PRKACBP22694 351 aa12.3□□□□□ -0.44
LIG1-214ENST00000597146 GBX2P52951 348 aaPredicted RBP12.3□□□□□ -0.44
LIG1-214ENST00000597146 TMEM42Q69YG0 159 aa12.3□□□□□ -0.44
LIG1-214ENST00000597146 TMEM200BQ69YZ2 307 aa12.3□□□□□ -0.44
LIG1-214ENST00000597146 ACP7Q6ZNF0 438 aa12.3□□□□□ -0.44
LIG1-214ENST00000597146 EGFL6Q8IUX8 553 aa12.3□□□□□ -0.44
LIG1-214ENST00000597146 SBSPONQ8IVN8 264 aa12.3□□□□□ -0.44
LIG1-214ENST00000597146 ENTHD1Q8IYW4 607 aa12.3□□□□□ -0.44
LIG1-214ENST00000597146 BATF2Q8N1L9 274 aa12.3□□□□□ -0.44
LIG1-214ENST00000597146 OR13C3Q8NGS6 347 aa12.3□□□□□ -0.44
LIG1-214ENST00000597146 PP6455Q8WZ26 134 aa12.3□□□□□ -0.44
LIG1-214ENST00000597146 C10orf35Q96D05 121 aa12.3□□□□□ -0.44
LIG1-214ENST00000597146 MALSU1Q96EH3 234 aa12.3□□□□□ -0.44
LIG1-214ENST00000597146 C4orf36Q96KX1 117 aa12.3□□□□□ -0.44
LIG1-214ENST00000597146 DUX3Q96PT4 197 aa12.3□□□□□ -0.44
LIG1-214ENST00000597146 ALG8Q9BVK2 526 aa12.3□□□□□ -0.44
LIG1-214ENST00000597146 CHCHD3Q9NX63 227 aaKnown RBP12.3□□□□□ -0.44
LIG1-214ENST00000597146 HHLA2Q9UM44 414 aa12.3□□□□□ -0.44
LIG1-214ENST00000597146 TBL2Q9Y4P3 447 aaKnown RBP12.3□□□□□ -0.44
LIG1-214ENST00000597146 HILPDAQ9Y5L2 63 aa12.3□□□□□ -0.44
LIG1-214ENST00000597146 hCG_1809904A0A1W2PP81 198 aa12.29□□□□□ -0.44
LIG1-214ENST00000597146 A0A1W2PPE2 198 aa12.29□□□□□ -0.44
LIG1-214ENST00000597146 A0A1W2PR64 198 aa12.29□□□□□ -0.44
LIG1-214ENST00000597146 A0A1W2PRV1 198 aa12.29□□□□□ -0.44
LIG1-214ENST00000597146 RBP2P50120 134 aa12.29□□□□□ -0.44
LIG1-214ENST00000597146 DYNLT3P51808 116 aa12.29□□□□□ -0.44
LIG1-214ENST00000597146 MTCP1P56278 107 aa12.29□□□□□ -0.44
LIG1-214ENST00000597146 RPL23AP62750 156 aaKnown RBP12.29□□□□□ -0.44
LIG1-214ENST00000597146 RPL31P62899 125 aaKnown RBP12.29□□□□□ -0.44
LIG1-214ENST00000597146 ZNF91Q05481 1191 aa12.29□□□□□ -0.44
LIG1-214ENST00000597146 RAB40BQ12829 278 aa12.29□□□□□ -0.44
LIG1-214ENST00000597146 ALKBH1Q13686 389 aaKnown RBP12.29□□□□□ -0.44
LIG1-214ENST00000597146 GALEQ14376 348 aa12.29□□□□□ -0.44
LIG1-214ENST00000597146 ABCA11PQ4W5N1 156 aa12.29□□□□□ -0.44
LIG1-214ENST00000597146 TTC23Q5W5X9 447 aa12.29□□□□□ -0.44
LIG1-214ENST00000597146 ZNF561Q8N587 486 aa12.29□□□□□ -0.44
LIG1-214ENST00000597146 OR4M1Q8NGD0 313 aa12.29□□□□□ -0.44
LIG1-214ENST00000597146 RDH12Q96NR8 316 aa12.29□□□□□ -0.44
LIG1-214ENST00000597146 PKIBQ9C010 78 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms