RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 FGFBP3Q8TAT2 258 aa14.28□□□□□ -0.12
LIG1-206ENST00000594067 TCTEX1D2Q8WW35 142 aa14.28□□□□□ -0.12
LIG1-206ENST00000594067 SH3BGRL3Q9H299 93 aa14.28□□□□□ -0.12
LIG1-206ENST00000594067 SLC2A9Q9NRM0 540 aa14.28□□□□□ -0.12
LIG1-206ENST00000594067 TMEM38BQ9NVV0 291 aa14.28□□□□□ -0.12
LIG1-206ENST00000594067 CST2P09228 141 aa14.28□□□□□ -0.12
LIG1-206ENST00000594067 OSR2Q8N2R0 312 aa14.28□□□□□ -0.12
LIG1-206ENST00000594067 M1APQ8TC57 530 aa14.28□□□□□ -0.12
LIG1-206ENST00000594067 HPSE2Q8WWQ2 592 aa14.28□□□□□ -0.12
LIG1-206ENST00000594067 GALNT14Q96FL9 552 aa14.28□□□□□ -0.12
LIG1-206ENST00000594067 SLC35B3Q9H1N7 401 aa14.28□□□□□ -0.12
LIG1-206ENST00000594067 ST3GAL6Q9Y274 331 aa14.28□□□□□ -0.12
LIG1-206ENST00000594067 FBXO7Q9Y3I1 522 aa14.28□□□□□ -0.12
LIG1-206ENST00000594067 PI4KAP42356 2102 aa14.28□□□□□ -0.12
LIG1-206ENST00000594067 BORCS7-ASMTA0A0B4J1R7 106 aa14.28□□□□□ -0.12
LIG1-206ENST00000594067 TERTO14746 1132 aaKnown RBP14.28□□□□□ -0.12
LIG1-206ENST00000594067 PPIHO43447 177 aaKnown RBP14.28□□□□□ -0.12
LIG1-206ENST00000594067 NOVA1P51513 510 aaKnown RBP14.28□□□□□ -0.12
LIG1-206ENST00000594067 PSG4Q00888 419 aa14.28□□□□□ -0.12
LIG1-206ENST00000594067 IL11RAQ14626 422 aa14.28□□□□□ -0.12
LIG1-206ENST00000594067 BCL2L14Q9BZR8 327 aa14.28□□□□□ -0.12
LIG1-206ENST00000594067 BCO1Q9HAY6 547 aa14.28□□□□□ -0.12
LIG1-206ENST00000594067 KCNJ16Q9NPI9 418 aa14.28□□□□□ -0.12
LIG1-206ENST00000594067 ZDHHC8Q9ULC8 765 aa14.28□□□□□ -0.12
LIG1-206ENST00000594067 NSG1A0A0A6YYJ2 146 aa14.27□□□□□ -0.12
LIG1-206ENST00000594067 C9J4A7 227 aa14.27□□□□□ -0.12
LIG1-206ENST00000594067 MAS1LP35410 378 aa14.27□□□□□ -0.12
LIG1-206ENST00000594067 RAC3P60763 192 aa14.27□□□□□ -0.12
LIG1-206ENST00000594067 LIAT1Q6ZQX7 453 aa14.27□□□□□ -0.12
LIG1-206ENST00000594067 AAED1Q7RTV5 226 aa14.27□□□□□ -0.12
LIG1-206ENST00000594067 AGBL5Q8NDL9 886 aa14.27□□□□□ -0.12
LIG1-206ENST00000594067 OR14L1PQ8NHC6 308 aa14.27□□□□□ -0.12
LIG1-206ENST00000594067 CD300LFQ8TDQ1 290 aa14.27□□□□□ -0.12
LIG1-206ENST00000594067 PIGCQ92535 297 aa14.27□□□□□ -0.12
LIG1-206ENST00000594067 NAT6Q93015 286 aa14.27□□□□□ -0.12
LIG1-206ENST00000594067 CLDN23Q96B33 292 aa14.27□□□□□ -0.12
LIG1-206ENST00000594067 SF3B5Q9BWJ5 86 aaKnown RBP14.27□□□□□ -0.12
LIG1-206ENST00000594067 MED19A0JLT2 244 aaPredicted RBP14.27□□□□□ -0.13
LIG1-206ENST00000594067 CXCL13O43927 109 aa14.27□□□□□ -0.13
LIG1-206ENST00000594067 GPR137BO60478 399 aa14.27□□□□□ -0.13
LIG1-206ENST00000594067 RGS19P49795 217 aa14.27□□□□□ -0.13
LIG1-206ENST00000594067 CARD18P57730 90 aa14.27□□□□□ -0.13
LIG1-206ENST00000594067 MLF1P58340 268 aa14.27□□□□□ -0.13
LIG1-206ENST00000594067 B3GALT5-AS1P59052 145 aa14.27□□□□□ -0.13
LIG1-206ENST00000594067 ZNF92Q03936 586 aa14.27□□□□□ -0.13
LIG1-206ENST00000594067 ASCL4Q6XD76 172 aa14.27□□□□□ -0.13
LIG1-206ENST00000594067 Q6ZPA2 131 aa14.27□□□□□ -0.13
LIG1-206ENST00000594067 ZNF565Q8N9K5 539 aa14.27□□□□□ -0.13
LIG1-206ENST00000594067 C18orf12Q96KH6 178 aa14.27□□□□□ -0.13
LIG1-206ENST00000594067 SUCNR1Q9BXA5 334 aa14.27□□□□□ -0.13
LIG1-206ENST00000594067 ZNF286AQ9HBT8 521 aa14.27□□□□□ -0.13
LIG1-206ENST00000594067 VPS13AQ96RL7 3174 aa14.27□□□□□ -0.13
LIG1-206ENST00000594067 TRBV23-1A0A0A0MS06 115 aa14.26□□□□□ -0.13
LIG1-206ENST00000594067 OR6C6A6NF89 314 aa14.26□□□□□ -0.13
LIG1-206ENST00000594067 GJE1A6NN92 205 aa14.26□□□□□ -0.13
LIG1-206ENST00000594067 H7C1Q1 480 aa14.26□□□□□ -0.13
LIG1-206ENST00000594067 PHF1O43189 567 aaPredicted RBP14.26□□□□□ -0.13
LIG1-206ENST00000594067 PRH1P02810 166 aa14.26□□□□□ -0.13
LIG1-206ENST00000594067 OR13C7P0DN81 318 aa14.26□□□□□ -0.13
LIG1-206ENST00000594067 NHLH2Q02577 135 aa14.26□□□□□ -0.13
LIG1-206ENST00000594067 GPR157Q5UAW9 335 aa14.26□□□□□ -0.13
LIG1-206ENST00000594067 FBXW12Q6X9E4 464 aa14.26□□□□□ -0.13
LIG1-206ENST00000594067 NTNG2Q96CW9 530 aa14.26□□□□□ -0.13
LIG1-206ENST00000594067 MSI2Q96DH6 328 aaKnown RBP14.26□□□□□ -0.13
LIG1-206ENST00000594067 YPEL4Q96NS1 127 aa14.26□□□□□ -0.13
LIG1-206ENST00000594067 ZNF716A6NP11 495 aa14.26□□□□□ -0.13
LIG1-206ENST00000594067 RAB5CP51148 216 aa14.26□□□□□ -0.13
LIG1-206ENST00000594067 CEACAM16Q2WEN9 425 aa14.26□□□□□ -0.13
LIG1-206ENST00000594067 NCMAPQ5T1S8 102 aa14.26□□□□□ -0.13
LIG1-206ENST00000594067 PLCXD3Q63HM9 321 aa14.26□□□□□ -0.13
LIG1-206ENST00000594067 TMEM42Q69YG0 159 aa14.26□□□□□ -0.13
LIG1-206ENST00000594067 HSD17B11Q8NBQ5 300 aa14.26□□□□□ -0.13
LIG1-206ENST00000594067 WNT5BQ9H1J7 359 aa14.26□□□□□ -0.13
LIG1-206ENST00000594067 TMPRSS5Q9H3S3 457 aa14.26□□□□□ -0.13
LIG1-206ENST00000594067 STRAPQ9Y3F4 350 aaKnown RBP14.26□□□□□ -0.13
LIG1-206ENST00000594067 RFPL3SP0C7P2 107 aa14.25□□□□□ -0.13
LIG1-206ENST00000594067 AADACP22760 399 aa14.25□□□□□ -0.13
LIG1-206ENST00000594067 DUSP1P28562 367 aa14.25□□□□□ -0.13
LIG1-206ENST00000594067 PPP1CCP36873 323 aaKnown RBP14.25□□□□□ -0.13
LIG1-206ENST00000594067 ASCL1P50553 236 aa14.25□□□□□ -0.13
LIG1-206ENST00000594067 RPS23P62266 143 aaKnown RBP14.25□□□□□ -0.13
LIG1-206ENST00000594067 MEX3BQ6ZN04 569 aaKnown RBP14.25□□□□□ -0.13
LIG1-206ENST00000594067 C1QL4Q86Z23 238 aa14.25□□□□□ -0.13
LIG1-206ENST00000594067 CPT1CQ8TCG5 803 aa14.25□□□□□ -0.13
LIG1-206ENST00000594067 FOXB1Q99853 325 aa14.25□□□□□ -0.13
LIG1-206ENST00000594067 ZNF442Q9H7R0 627 aa14.25□□□□□ -0.13
LIG1-206ENST00000594067 SLC7A11Q9UPY5 501 aa14.25□□□□□ -0.13
LIG1-206ENST00000594067 RCL1Q9Y2P8 373 aaKnown RBP14.25□□□□□ -0.13
LIG1-206ENST00000594067 hCG_38984A0A1B0GV85 526 aa14.25□□□□□ -0.13
LIG1-206ENST00000594067 ZNHIT1O43257 154 aa14.25□□□□□ -0.13
LIG1-206ENST00000594067 CFIP05156 583 aa14.25□□□□□ -0.13
LIG1-206ENST00000594067 RAB1AP62820 205 aa14.25□□□□□ -0.13
LIG1-206ENST00000594067 GGNQ86UU5 652 aa14.25□□□□□ -0.13
LIG1-206ENST00000594067 LGI3Q8N145 548 aa14.25□□□□□ -0.13
LIG1-206ENST00000594067 OR2Y1Q8NGV0 311 aa14.25□□□□□ -0.13
LIG1-206ENST00000594067 PBDC1Q9BVG4 233 aa14.25□□□□□ -0.13
LIG1-206ENST00000594067 OR2H1Q9GZK4 316 aa14.25□□□□□ -0.13
LIG1-206ENST00000594067 P4HTMQ9NXG6 502 aa14.25□□□□□ -0.13
LIG1-206ENST00000594067 A0A1B0GV50 99 aa14.24□□□□□ -0.13
LIG1-206ENST00000594067 PDCD6O75340 191 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms