RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 PMP2P02689 132 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 HIST1H1DP16402 221 aaKnown RBP11.25□□□□□ -0.61
VRK3-205ENST00000593919 RPS23P62266 143 aaKnown RBP11.25□□□□□ -0.61
VRK3-205ENST00000593919 SORDQ00796 357 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 OR8G1Q15617 311 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 ASCL4Q6XD76 172 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 Q6ZR03 302 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 NUP37Q8NFH4 326 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 OR56B1Q8NGI3 324 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 ELMOD3Q96FG2 381 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 PRRT1Q99946 306 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 URM1Q9BTM9 101 aaKnown RBP11.25□□□□□ -0.61
VRK3-205ENST00000593919 RTL8AQ9BWD3 113 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 ALX4Q9H161 411 aaPredicted RBP11.25□□□□□ -0.61
VRK3-205ENST00000593919 CLEC4MQ9H2X3 399 aaPredicted RBP11.25□□□□□ -0.61
VRK3-205ENST00000593919 MSL2Q9HCI7 577 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 TMEM100Q9NV29 134 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 NDRG3Q9UGV2 375 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 DUSP13Q9UII6 198 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 USP9XQ93008 2570 aaPredicted RBP11.24□□□□□ -0.61
VRK3-205ENST00000593919 SLC22A5O76082 557 aa11.24□□□□□ -0.61
VRK3-205ENST00000593919 HTR3BO95264 441 aa11.24□□□□□ -0.61
VRK3-205ENST00000593919 MPC2O95563 127 aa11.24□□□□□ -0.61
VRK3-205ENST00000593919 CSTBP04080 98 aaKnown RBP11.24□□□□□ -0.61
VRK3-205ENST00000593919 SFTPBP07988 381 aa11.24□□□□□ -0.61
VRK3-205ENST00000593919 GSTP1P09211 210 aaKnown RBP11.24□□□□□ -0.61
VRK3-205ENST00000593919 TMEM50BP56557 158 aa11.24□□□□□ -0.61
VRK3-205ENST00000593919 KLF3P57682 345 aaPredicted RBP11.24□□□□□ -0.61
VRK3-205ENST00000593919 RPS27AP62979 156 aaKnown RBP11.24□□□□□ -0.61
VRK3-205ENST00000593919 GRK1Q15835 563 aa11.24□□□□□ -0.61
VRK3-205ENST00000593919 ADAM5Q6NVV9 412 aa11.24□□□□□ -0.61
VRK3-205ENST00000593919 HAGHLQ6PII5 290 aaPredicted RBP11.24□□□□□ -0.61
VRK3-205ENST00000593919 WDR86Q86TI4 376 aa11.24□□□□□ -0.61
VRK3-205ENST00000593919 C12orf45Q8N5I9 185 aaPredicted RBP11.24□□□□□ -0.61
VRK3-205ENST00000593919 ZSCAN4Q8NAM6 433 aaPredicted RBP11.24□□□□□ -0.61
VRK3-205ENST00000593919 ZNF680Q8NEM1 530 aa11.24□□□□□ -0.61
VRK3-205ENST00000593919 ARHGAP5-AS1Q96IT6 56 aa11.24□□□□□ -0.61
VRK3-205ENST00000593919 MICU1Q9BPX6 476 aa11.24□□□□□ -0.61
VRK3-205ENST00000593919 SYT3Q9BQG1 590 aa11.24□□□□□ -0.61
VRK3-205ENST00000593919 SLC2A8Q9NY64 477 aa11.24□□□□□ -0.61
VRK3-205ENST00000593919 IL36GQ9NZH8 169 aa11.24□□□□□ -0.61
VRK3-205ENST00000593919 OPN4Q9UHM6 478 aa11.24□□□□□ -0.61
VRK3-205ENST00000593919 HRNRQ86YZ3 2850 aaPredicted RBP11.24□□□□□ -0.61
VRK3-205ENST00000593919 KMT2BQ9UMN6 2715 aaPredicted RBP11.24□□□□□ -0.61
VRK3-205ENST00000593919 SPTAN1Q13813 2472 aaKnown RBP11.23□□□□□ -0.61
VRK3-205ENST00000593919 CHD6Q8TD26 2715 aa11.23□□□□□ -0.61
VRK3-205ENST00000593919 IGLV3-9A0A075B6K5 115 aa11.23□□□□□ -0.61
VRK3-205ENST00000593919 PRSS47A8MTI9 375 aa11.23□□□□□ -0.61
VRK3-205ENST00000593919 B8ZZF3 427 aa11.23□□□□□ -0.61
VRK3-205ENST00000593919 H3BUI4 141 aa11.23□□□□□ -0.61
VRK3-205ENST00000593919 IGHV3-13P01766 116 aa11.23□□□□□ -0.61
VRK3-205ENST00000593919 CXCL2P19875 107 aa11.23□□□□□ -0.61
VRK3-205ENST00000593919 ARPC4P59998 168 aa11.23□□□□□ -0.61
VRK3-205ENST00000593919 ZNF573Q86YE8 665 aa11.23□□□□□ -0.61
VRK3-205ENST00000593919 OR8H3Q8N146 312 aa11.23□□□□□ -0.61
VRK3-205ENST00000593919 BATF2Q8N1L9 274 aa11.23□□□□□ -0.61
VRK3-205ENST00000593919 OR4K15Q8NH41 348 aa11.23□□□□□ -0.61
VRK3-205ENST00000593919 ITLN2Q8WWU7 325 aaPredicted RBP11.23□□□□□ -0.61
VRK3-205ENST00000593919 SLAMF9Q96A28 289 aa11.23□□□□□ -0.61
VRK3-205ENST00000593919 MRGPRFQ96AM1 343 aa11.23□□□□□ -0.61
VRK3-205ENST00000593919 OR51I2Q9H344 312 aa11.23□□□□□ -0.61
VRK3-205ENST00000593919 ESRP2Q9H6T0 727 aaKnown RBP11.23□□□□□ -0.61
VRK3-205ENST00000593919 NOP16Q9Y3C1 178 aaKnown RBP11.23□□□□□ -0.61
VRK3-205ENST00000593919 PLSCR5A0PG75 271 aa11.23□□□□□ -0.61
VRK3-205ENST00000593919 L7N2F9 121 aa11.23□□□□□ -0.61
VRK3-205ENST00000593919 SYNGR1O43759 233 aa11.23□□□□□ -0.61
VRK3-205ENST00000593919 IFNA6P05013 189 aa11.23□□□□□ -0.61
VRK3-205ENST00000593919 NPBWR2P48146 333 aa11.23□□□□□ -0.61
VRK3-205ENST00000593919 DHODHQ02127 395 aa11.23□□□□□ -0.61
VRK3-205ENST00000593919 ZNF154Q13106 437 aa11.23□□□□□ -0.61
VRK3-205ENST00000593919 DHRS2Q13268 280 aa11.23□□□□□ -0.61
VRK3-205ENST00000593919 ARFRP1Q13795 201 aa11.23□□□□□ -0.61
VRK3-205ENST00000593919 SMUG1Q53HV7 270 aa11.23□□□□□ -0.61
VRK3-205ENST00000593919 FAM76BQ5HYJ3 339 aa11.23□□□□□ -0.61
VRK3-205ENST00000593919 NCMAPQ5T1S8 102 aa11.23□□□□□ -0.61
VRK3-205ENST00000593919 PLPPR2Q96GM1 343 aa11.23□□□□□ -0.61
VRK3-205ENST00000593919 Q96M66 194 aa11.23□□□□□ -0.61
VRK3-205ENST00000593919 TM2D1Q9BX74 207 aa11.23□□□□□ -0.61
VRK3-205ENST00000593919 MRPL37Q9BZE1 423 aaKnown RBP11.23□□□□□ -0.61
VRK3-205ENST00000593919 FXYD6-FXYD2A0A087WZ82 144 aa11.22□□□□□ -0.61
VRK3-205ENST00000593919 IGHV3-64DA0A0J9YX35 117 aa11.22□□□□□ -0.61
VRK3-205ENST00000593919 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.22□□□□□ -0.61
VRK3-205ENST00000593919 A0A1B0GWJ7 208 aa11.22□□□□□ -0.61
VRK3-205ENST00000593919 TUBAL3A6NHL2 446 aa11.22□□□□□ -0.61
VRK3-205ENST00000593919 OR2AT4A6NND4 320 aa11.22□□□□□ -0.61
VRK3-205ENST00000593919 M0R233 179 aa11.22□□□□□ -0.61
VRK3-205ENST00000593919 MFNGO00587 321 aa11.22□□□□□ -0.61
VRK3-205ENST00000593919 HLA-AP01891 365 aaKnown RBP11.22□□□□□ -0.61
VRK3-205ENST00000593919 CPT2P23786 658 aa11.22□□□□□ -0.61
VRK3-205ENST00000593919 MPZP25189 248 aa11.22□□□□□ -0.61
VRK3-205ENST00000593919 EXOSC2Q13868 293 aaKnown RBP11.22□□□□□ -0.61
VRK3-205ENST00000593919 OPCMLQ14982 345 aa11.22□□□□□ -0.61
VRK3-205ENST00000593919 FAM189A2Q15884 450 aa11.22□□□□□ -0.61
VRK3-205ENST00000593919 MICBQ29980 383 aa11.22□□□□□ -0.61
VRK3-205ENST00000593919 FAM209AQ5JX71 171 aa11.22□□□□□ -0.61
VRK3-205ENST00000593919 SAXO1Q8IYX7 474 aa11.22□□□□□ -0.61
VRK3-205ENST00000593919 ZNF843Q8N446 348 aa11.22□□□□□ -0.61
VRK3-205ENST00000593919 FAM89BQ8N5H3 189 aa11.22□□□□□ -0.61
VRK3-205ENST00000593919 OR13G1Q8NGZ3 307 aa11.22□□□□□ -0.61
VRK3-205ENST00000593919 GTF3AQ92664 365 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms