RNA–Protein interactions for RNA: ENST00000592158.1

SMARCA4-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 409 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-218ENST00000592158 FOXRED1Q96CU9 486 aaPredicted RBP6.78□□□□□ -1.32
SMARCA4-218ENST00000592158 LRGUKQ96M69 825 aa6.78□□□□□ -1.32
SMARCA4-218ENST00000592158 OR8B4Q96RC9 309 aa6.78□□□□□ -1.32
SMARCA4-218ENST00000592158 TEAD3Q99594 435 aa6.78□□□□□ -1.32
SMARCA4-218ENST00000592158 YIPF3Q9GZM5 350 aa6.78□□□□□ -1.32
SMARCA4-218ENST00000592158 IKZF2Q9UKS7 526 aa6.78□□□□□ -1.32
SMARCA4-218ENST00000592158 ARRDC5A6NEK1 342 aa6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 A6NIN4 97 aa6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 FAM90A8PA6NJQ4 464 aa6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 ACOD1A6NK06 481 aa6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 ODF3BA8MYP8 253 aa6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 PRR32B1ATL7 298 aa6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 B2RBV5 119 aa6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 GNGT2O14610 69 aa6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 DCTN3O75935 186 aa6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 SCAF4O95104 1147 aaKnown RBP6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 TK1P04183 234 aa6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 JUNBP17275 347 aaPredicted RBP6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 SLC2A5P22732 501 aa6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 RIDAP52758 137 aaKnown RBP6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 DLX6P56179 175 aa6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 EDDM3BP56851 147 aa6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 MS4A2Q01362 244 aa6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 SSX2Q16385 188 aa6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 MRGPRG-AS1Q2M3A8 158 aa6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 CLVS2Q5SYC1 327 aa6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 LDLRAD2Q5SZI1 272 aa6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 TMEM236Q5W0B7 351 aa6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 ACSM6Q6P461 480 aa6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 KRT74Q7RTS7 529 aa6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 HS3ST5Q8IZT8 346 aa6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 KCTD12Q96CX2 325 aaKnown RBP6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 WDR89Q96FK6 387 aaPredicted RBP6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 NRIP2Q9BQI9 281 aa6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 MROQ9BYG7 248 aa6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 ZNF556Q9HAH1 456 aa6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 SEBOXQ9HB31 216 aaPredicted RBP6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 NUFIP1Q9UHK0 495 aaKnown RBP6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 COPS3Q9UNS2 423 aa6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 POLDIP2Q9Y2S7 368 aa6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 ARL2BPQ9Y2Y0 163 aa6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 TBL2Q9Y4P3 447 aaKnown RBP6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 AGRNO00468 2067 aa6.77□□□□□ -1.33
SMARCA4-218ENST00000592158 PQLC2LA1A4F0 135 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 CCDC182A6NF36 153 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 C17orf98A8MV24 154 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 LOC110117498-PIK3R3F6TDL0 507 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 NOS1APO75052 506 aaPredicted RBP6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 E2F6O75461 281 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 DHRS3O75911 302 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 INMTO95050 263 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 IGLV3-1P01715 115 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 TTRP02766 147 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 ZNF728P0DKX0 622 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 OSMP13725 252 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 AZGP1P25311 298 aaKnown RBP6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 MNAT1P51948 309 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 GYS2P54840 703 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 OR12D2P58182 307 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 GNGT1P63211 74 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 CDK5Q00535 292 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 ZNF45Q02386 682 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 SLC34A1Q06495 639 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 TRIM25Q14258 630 aaKnown RBP6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 GK3PQ14409 553 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 EDDM3AQ14507 147 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 SNAPC1Q16533 368 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 C9orf152Q5JTZ5 239 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 BCL2L15Q5TBC7 163 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 LCN1P1Q5VSP4 162 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 ZNF626Q68DY1 528 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 DEGS2Q6QHC5 323 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 PLEKHG7Q6ZR37 379 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 ANGPTL5Q86XS5 388 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 CALHM1Q8IU99 346 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 ZNF679Q8IYX0 411 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 ADGRG5Q8IZF4 528 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 ARHGAP24Q8N264 748 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 NDNFQ8TB73 568 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 TRMT10AQ8TBZ6 339 aaKnown RBP6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 ASB17Q8WXJ9 295 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 MALSU1Q96EH3 234 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 CNN2Q99439 309 aaKnown RBP6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 TEX12Q9BXU0 123 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 HES4Q9HCC6 221 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 TVP23BQ9NYZ1 205 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 SLC22A13Q9Y226 551 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 HILPDAQ9Y5L2 63 aa6.76□□□□□ -1.33
SMARCA4-218ENST00000592158 A0A0J9YWU9 116 aa6.75□□□□□ -1.33
SMARCA4-218ENST00000592158 FAM230AA0A1W2PPH8 454 aa6.75□□□□□ -1.33
SMARCA4-218ENST00000592158 K7N7A8 449 aa6.75□□□□□ -1.33
SMARCA4-218ENST00000592158 CCRL2O00421 344 aa6.75□□□□□ -1.33
SMARCA4-218ENST00000592158 DLGAP1O14490 977 aa6.75□□□□□ -1.33
SMARCA4-218ENST00000592158 MAGEB4O15481 346 aaPredicted RBP6.75□□□□□ -1.33
SMARCA4-218ENST00000592158 ZNF254O75437 659 aa6.75□□□□□ -1.33
SMARCA4-218ENST00000592158 IGHV1-8P0DP01 117 aa6.75□□□□□ -1.33
SMARCA4-218ENST00000592158 PRKACGP22612 351 aa6.75□□□□□ -1.33
SMARCA4-218ENST00000592158 ACTA2P62736 377 aa6.75□□□□□ -1.33
SMARCA4-218ENST00000592158 ACTG2P63267 376 aa6.75□□□□□ -1.33
SMARCA4-218ENST00000592158 ACTC1P68032 377 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms