RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 APOBEC3DQ96AK3 386 aaPredicted RBP12.95□□□□□ -0.34
SMARCA4-214ENST00000589677 C10orf35Q96D05 121 aa12.95□□□□□ -0.34
SMARCA4-214ENST00000589677 GPR61Q9BZJ8 451 aa12.95□□□□□ -0.34
SMARCA4-214ENST00000589677 ABCA3Q99758 1704 aa12.95□□□□□ -0.34
SMARCA4-214ENST00000589677 PLPP3O14495 311 aa12.95□□□□□ -0.34
SMARCA4-214ENST00000589677 IGHV3-9P01782 118 aa12.95□□□□□ -0.34
SMARCA4-214ENST00000589677 HTR1DP28221 377 aa12.95□□□□□ -0.34
SMARCA4-214ENST00000589677 SUCLG1P53597 346 aaKnown RBP12.95□□□□□ -0.34
SMARCA4-214ENST00000589677 MESTQ5EB52 335 aa12.95□□□□□ -0.34
SMARCA4-214ENST00000589677 TP53RKQ96S44 253 aa12.95□□□□□ -0.34
SMARCA4-214ENST00000589677 OR5AC2Q9NZP5 309 aa12.95□□□□□ -0.34
SMARCA4-214ENST00000589677 FLRT3Q9NZU0 649 aa12.95□□□□□ -0.34
SMARCA4-214ENST00000589677 WASHC3Q9Y3C0 194 aa12.95□□□□□ -0.34
SMARCA4-214ENST00000589677 BRS3P32247 399 aa12.94□□□□□ -0.34
SMARCA4-214ENST00000589677 CASP6P55212 293 aa12.94□□□□□ -0.34
SMARCA4-214ENST00000589677 EIF4E3Q8N5X7 224 aaKnown RBP12.94□□□□□ -0.34
SMARCA4-214ENST00000589677 OR5D13Q8NGL4 314 aa12.94□□□□□ -0.34
SMARCA4-214ENST00000589677 MOGAT1Q96PD6 335 aa12.94□□□□□ -0.34
SMARCA4-214ENST00000589677 SH2D2AQ9NP31 389 aa12.94□□□□□ -0.34
SMARCA4-214ENST00000589677 DYNLRB1Q9NP97 96 aa12.94□□□□□ -0.34
SMARCA4-214ENST00000589677 DUSP13Q9UII6 198 aa12.94□□□□□ -0.34
SMARCA4-214ENST00000589677 TIMM9Q9Y5J7 89 aa12.94□□□□□ -0.34
SMARCA4-214ENST00000589677 CTXND1A0A1B0GTU2 59 aa12.94□□□□□ -0.34
SMARCA4-214ENST00000589677 LRRC30A6NM36 301 aa12.94□□□□□ -0.34
SMARCA4-214ENST00000589677 RER1O15258 196 aa12.94□□□□□ -0.34
SMARCA4-214ENST00000589677 TGIF2LXQ8IUE1 241 aa12.94□□□□□ -0.34
SMARCA4-214ENST00000589677 ARID1BQ8NFD5 2236 aaPredicted RBP12.94□□□□□ -0.34
SMARCA4-214ENST00000589677 PARD6GQ9BYG4 376 aaPredicted RBP12.94□□□□□ -0.34
SMARCA4-214ENST00000589677 UBE2ZQ9H832 354 aaPredicted RBP12.94□□□□□ -0.34
SMARCA4-214ENST00000589677 ANKRD10Q9NXR5 420 aa12.94□□□□□ -0.34
SMARCA4-214ENST00000589677 ZMIZ1Q9ULJ6 1067 aa12.94□□□□□ -0.34
SMARCA4-214ENST00000589677 VSIG8P0DPA2 414 aa12.94□□□□□ -0.34
SMARCA4-214ENST00000589677 ACAA2P42765 397 aaKnown RBP12.94□□□□□ -0.34
SMARCA4-214ENST00000589677 ETV3LQ6ZN32 361 aa12.94□□□□□ -0.34
SMARCA4-214ENST00000589677 UQCR10Q9UDW1 63 aa12.94□□□□□ -0.34
SMARCA4-214ENST00000589677 ZFC3H1O60293 1989 aaKnown RBP12.94□□□□□ -0.34
SMARCA4-214ENST00000589677 DNASE2O00115 360 aaPredicted RBP12.94□□□□□ -0.34
SMARCA4-214ENST00000589677 CYB561P49447 251 aa12.94□□□□□ -0.34
SMARCA4-214ENST00000589677 LYZL2Q7Z4W2 148 aa12.94□□□□□ -0.34
SMARCA4-214ENST00000589677 RLN3Q8WXF3 142 aa12.94□□□□□ -0.34
SMARCA4-214ENST00000589677 OR2A5Q96R48 311 aa12.94□□□□□ -0.34
SMARCA4-214ENST00000589677 LINC00587B1AMM8 73 aa12.93□□□□□ -0.34
SMARCA4-214ENST00000589677 CAPZBP47756 277 aa12.93□□□□□ -0.34
SMARCA4-214ENST00000589677 HFEQ30201 348 aa12.93□□□□□ -0.34
SMARCA4-214ENST00000589677 OR4A47Q6IF82 309 aa12.93□□□□□ -0.34
SMARCA4-214ENST00000589677 BPIFA4PQ86YQ2 179 aa12.93□□□□□ -0.34
SMARCA4-214ENST00000589677 WNT2BQ93097 391 aa12.93□□□□□ -0.34
SMARCA4-214ENST00000589677 B4GALT1P15291 398 aa12.93□□□□□ -0.34
SMARCA4-214ENST00000589677 CEACAM6P40199 344 aa12.93□□□□□ -0.34
SMARCA4-214ENST00000589677 LINC01555Q8NAE3 123 aa12.93□□□□□ -0.34
SMARCA4-214ENST00000589677 BCL2L2Q92843 193 aaPredicted RBP12.93□□□□□ -0.34
SMARCA4-214ENST00000589677 C6orf106Q9H6K1 298 aaPredicted RBP12.93□□□□□ -0.34
SMARCA4-214ENST00000589677 TBX21Q9UL17 535 aa12.93□□□□□ -0.34
SMARCA4-214ENST00000589677 SNURFLB1AK76 121 aa12.93□□□□□ -0.34
SMARCA4-214ENST00000589677 MMP9P14780 707 aa12.93□□□□□ -0.34
SMARCA4-214ENST00000589677 SERF2P84101 59 aa12.93□□□□□ -0.34
SMARCA4-214ENST00000589677 TSPO2Q5TGU0 170 aa12.93□□□□□ -0.34
SMARCA4-214ENST00000589677 A0A1B0GU03 582 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 ST8SIA5O15466 376 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 GLB1P16278 677 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 CHRNB4P30926 498 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 MYBPHQ13203 477 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 Q1RN00 199 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 YRDCQ86U90 279 aaKnown RBP12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 PATE1Q8WXA2 126 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 GMPPAQ96IJ6 420 aaPredicted RBP12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 RNF2Q99496 336 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 KCNK7Q9Y2U2 307 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 ALG1L2C9J202 215 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 PAGE4O60829 102 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 CNIH1O95406 144 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 NTN1O95631 604 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 GNG3P63215 75 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 LSM11P83369 360 aaKnown RBP eCLIP12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 INSM1Q01101 510 aaPredicted RBP12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 VHLLQ6RSH7 139 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 OR1N1Q8NGS0 311 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 OR10AC1Q8NH08 325 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 PGLYRP3Q96LB9 341 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 OR2M5A3KFT3 312 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 NKX2-6A6NCS4 301 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 OR1D5P58170 312 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 SLC25A38Q96DW6 304 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 ALG14Q96F25 216 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 P2RX4Q99571 388 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 WDR13Q9H1Z4 485 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 CD8AP01732 235 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 IER3P46695 156 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 ATG4DQ86TL0 474 aaPredicted RBP12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 OR8B12Q8NGG6 310 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 H1FXQ92522 213 aaKnown RBP12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 TAAR3PQ9P1P4 343 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 HSPB8Q9UJY1 196 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 THSD7AQ9UPZ6 1657 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 LOC102724200A0A096LPH7 203 aaPredicted RBP12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 H0Y8X5 98 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 KCNAB3O43448 404 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 BCL3P20749 454 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 CAMPP49913 170 aa12.92□□□□□ -0.34
SMARCA4-214ENST00000589677 CSRP3P50461 194 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms