RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 TAS2R8Q9NYW2 309 aa18.77■□□□□ 0.6
ATG4D-209ENST00000588857 GLS2Q9UI32 602 aa18.77■□□□□ 0.6
ATG4D-209ENST00000588857 FBXO9Q9UK97 447 aaPredicted RBP18.77■□□□□ 0.6
ATG4D-209ENST00000588857 CA11O75493 328 aa18.76■□□□□ 0.59
ATG4D-209ENST00000588857 IRF2P14316 349 aa18.76■□□□□ 0.59
ATG4D-209ENST00000588857 PMELP40967 661 aa18.76■□□□□ 0.59
ATG4D-209ENST00000588857 MRPS15P82914 257 aaKnown RBP18.76■□□□□ 0.59
ATG4D-209ENST00000588857 ACP7Q6ZNF0 438 aa18.76■□□□□ 0.59
ATG4D-209ENST00000588857 SPOCK3Q9BQ16 436 aa18.76■□□□□ 0.59
ATG4D-209ENST00000588857 CBLN4Q9NTU7 201 aa18.76■□□□□ 0.59
ATG4D-209ENST00000588857 RNF7Q9UBF6 113 aa18.76■□□□□ 0.59
ATG4D-209ENST00000588857 SRRM5B3KS81 715 aa18.76■□□□□ 0.59
ATG4D-209ENST00000588857 SH2D1BO14796 132 aa18.76■□□□□ 0.59
ATG4D-209ENST00000588857 DEGS1O15121 323 aa18.76■□□□□ 0.59
ATG4D-209ENST00000588857 PLA2G10O15496 165 aa18.76■□□□□ 0.59
ATG4D-209ENST00000588857 CSF1P09603 554 aa18.76■□□□□ 0.59
ATG4D-209ENST00000588857 ZNF146Q15072 292 aa18.76■□□□□ 0.59
ATG4D-209ENST00000588857 BRICD5Q6PL45 260 aa18.76■□□□□ 0.59
ATG4D-209ENST00000588857 BOLLQ8N9W6 283 aaKnown RBP18.76■□□□□ 0.59
ATG4D-209ENST00000588857 Q8TCH9 128 aa18.76■□□□□ 0.59
ATG4D-209ENST00000588857 HPS1Q92902 700 aa18.76■□□□□ 0.59
ATG4D-209ENST00000588857 MARVELD3Q96A59 401 aa18.76■□□□□ 0.59
ATG4D-209ENST00000588857 SULT4A1Q9BR01 284 aa18.76■□□□□ 0.59
ATG4D-209ENST00000588857 IFT22Q9H7X7 185 aa18.76■□□□□ 0.59
ATG4D-209ENST00000588857 IFT46Q9NQC8 304 aa18.76■□□□□ 0.59
ATG4D-209ENST00000588857 NOTCH2Q04721 2471 aa18.75■□□□□ 0.59
ATG4D-209ENST00000588857 LRRC30A6NM36 301 aa18.75■□□□□ 0.59
ATG4D-209ENST00000588857 CENPXA8MT69 81 aa18.75■□□□□ 0.59
ATG4D-209ENST00000588857 SSX5O60225 188 aa18.75■□□□□ 0.59
ATG4D-209ENST00000588857 ZNF44P15621 663 aa18.75■□□□□ 0.59
ATG4D-209ENST00000588857 PPOXP50336 477 aa18.75■□□□□ 0.59
ATG4D-209ENST00000588857 MZT2BQ6NZ67 158 aa18.75■□□□□ 0.59
ATG4D-209ENST00000588857 GCSAMQ8N6F7 178 aa18.75■□□□□ 0.59
ATG4D-209ENST00000588857 VRK1Q99986 396 aaPredicted RBP18.75■□□□□ 0.59
ATG4D-209ENST00000588857 RCC2Q9P258 522 aaKnown RBP18.75■□□□□ 0.59
ATG4D-209ENST00000588857 OR14J1Q9UGF5 321 aa18.75■□□□□ 0.59
ATG4D-209ENST00000588857 NPTNQ9Y639 398 aa18.75■□□□□ 0.59
ATG4D-209ENST00000588857 MAST4O15021 2626 aa18.74■□□□□ 0.59
ATG4D-209ENST00000588857 NAV2Q8IVL1 2488 aa18.74■□□□□ 0.59
ATG4D-209ENST00000588857 ANKRD20A5PA0PJZ0 165 aa18.74■□□□□ 0.59
ATG4D-209ENST00000588857 UBE2QL1A1L167 161 aa18.74■□□□□ 0.59
ATG4D-209ENST00000588857 MCRIP1C9JLW8 97 aa18.74■□□□□ 0.59
ATG4D-209ENST00000588857 LYRM1O43325 122 aa18.74■□□□□ 0.59
ATG4D-209ENST00000588857 PTTG1O95997 202 aa18.74■□□□□ 0.59
ATG4D-209ENST00000588857 KNG1P01042 644 aa18.74■□□□□ 0.59
ATG4D-209ENST00000588857 CBX5P45973 191 aa18.74■□□□□ 0.59
ATG4D-209ENST00000588857 KLF9Q13886 244 aaPredicted RBP18.74■□□□□ 0.59
ATG4D-209ENST00000588857 TRIM16LQ309B1 348 aa18.74■□□□□ 0.59
ATG4D-209ENST00000588857 DCDC5Q6ZRR9 648 aa18.74■□□□□ 0.59
ATG4D-209ENST00000588857 FAM90A1Q86YD7 464 aa18.74■□□□□ 0.59
ATG4D-209ENST00000588857 C11orf54Q9H0W9 315 aaPredicted RBP18.74■□□□□ 0.59
ATG4D-209ENST00000588857 TREM2Q9NZC2 230 aa18.74■□□□□ 0.59
ATG4D-209ENST00000588857 DNAJB11Q9UBS4 358 aa18.74■□□□□ 0.59
ATG4D-209ENST00000588857 AK3Q9UIJ7 227 aa18.74■□□□□ 0.59
ATG4D-209ENST00000588857 PLEKHA6Q9Y2H5 1048 aa18.74■□□□□ 0.59
ATG4D-209ENST00000588857 CACNG2Q9Y698 323 aa18.74■□□□□ 0.59
ATG4D-209ENST00000588857 HAND1O96004 215 aa18.73■□□□□ 0.59
ATG4D-209ENST00000588857 LHBP01229 141 aa18.73■□□□□ 0.59
ATG4D-209ENST00000588857 EGR1P18146 543 aa18.73■□□□□ 0.59
ATG4D-209ENST00000588857 RCVRNP35243 200 aa18.73■□□□□ 0.59
ATG4D-209ENST00000588857 DYRK1AQ13627 763 aa18.73■□□□□ 0.59
ATG4D-209ENST00000588857 Q6P435 159 aa18.73■□□□□ 0.59
ATG4D-209ENST00000588857 SUMF2Q8NBJ7 301 aa18.73■□□□□ 0.59
ATG4D-209ENST00000588857 NEK7Q8TDX7 302 aa18.73■□□□□ 0.59
ATG4D-209ENST00000588857 CYYR1Q96J86 154 aa18.73■□□□□ 0.59
ATG4D-209ENST00000588857 CMSS1Q9BQ75 279 aaKnown RBP18.73■□□□□ 0.59
ATG4D-209ENST00000588857 UBTD1Q9HAC8 227 aa18.73■□□□□ 0.59
ATG4D-209ENST00000588857 TANC2Q9HCD6 1990 aa18.73■□□□□ 0.59
ATG4D-209ENST00000588857 CENPEQ02224 2701 aa18.73■□□□□ 0.59
ATG4D-209ENST00000588857 A0A1W2PPR1 153 aa18.72■□□□□ 0.59
ATG4D-209ENST00000588857 OR2H2O95918 312 aa18.72■□□□□ 0.59
ATG4D-209ENST00000588857 GLAP06280 429 aa18.72■□□□□ 0.59
ATG4D-209ENST00000588857 FCER2P06734 321 aa18.72■□□□□ 0.59
ATG4D-209ENST00000588857 COX6B1P14854 86 aa18.72■□□□□ 0.59
ATG4D-209ENST00000588857 HOXA4Q00056 320 aaPredicted RBP18.72■□□□□ 0.59
ATG4D-209ENST00000588857 RBM39Q14498 530 aaKnown RBP18.72■□□□□ 0.59
ATG4D-209ENST00000588857 CHPT1Q8WUD6 406 aa18.72■□□□□ 0.59
ATG4D-209ENST00000588857 OCSTAMPQ9BR26 566 aa18.72■□□□□ 0.59
ATG4D-209ENST00000588857 C7orf50Q9BRJ6 194 aaKnown RBP18.72■□□□□ 0.59
ATG4D-209ENST00000588857 DPCDQ9BVM2 203 aaPredicted RBP18.72■□□□□ 0.59
ATG4D-209ENST00000588857 CELSR2Q9HCU4 2923 aa18.72■□□□□ 0.59
ATG4D-209ENST00000588857 SIRPB1O00241 398 aa18.72■□□□□ 0.59
ATG4D-209ENST00000588857 HSPB6O14558 160 aa18.72■□□□□ 0.59
ATG4D-209ENST00000588857 RBMXP38159 391 aaKnown RBP18.72■□□□□ 0.59
ATG4D-209ENST00000588857 MINDY2Q8NBR6 621 aa18.72■□□□□ 0.59
ATG4D-209ENST00000588857 RDH5Q92781 318 aa18.72■□□□□ 0.59
ATG4D-209ENST00000588857 NLKQ9UBE8 527 aa18.72■□□□□ 0.59
ATG4D-209ENST00000588857 ZNF107Q9UII5 783 aaPredicted RBP18.72■□□□□ 0.59
ATG4D-209ENST00000588857 CRYBG3Q68DQ2 2970 aa18.71■□□□□ 0.59
ATG4D-209ENST00000588857 TRAV24A0A0B4J272 114 aa18.71■□□□□ 0.59
ATG4D-209ENST00000588857 RFPL4AA6NLU0 287 aa18.71■□□□□ 0.59
ATG4D-209ENST00000588857 RFPL4AL1F8VTS6 287 aa18.71■□□□□ 0.59
ATG4D-209ENST00000588857 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.71■□□□□ 0.59
ATG4D-209ENST00000588857 CYB5R3P00387 301 aaPredicted RBP18.71■□□□□ 0.59
ATG4D-209ENST00000588857 CD8AP01732 235 aa18.71■□□□□ 0.59
ATG4D-209ENST00000588857 SOD3P08294 240 aa18.71■□□□□ 0.59
ATG4D-209ENST00000588857 DANCRP0C864 163 aa18.71■□□□□ 0.59
ATG4D-209ENST00000588857 FAUP35544 74 aaKnown RBP18.71■□□□□ 0.59
ATG4D-209ENST00000588857 TAS2R19P59542 299 aa18.71■□□□□ 0.59
ATG4D-209ENST00000588857 PAN3Q58A45 887 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms