RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 BORCS8Q96FH0 119 aa14.63□□□□□ -0.07
CCDC43-204ENST00000588687 TBX5Q99593 518 aa14.63□□□□□ -0.07
CCDC43-204ENST00000588687 B9D2Q9BPU9 175 aa14.63□□□□□ -0.07
CCDC43-204ENST00000588687 PRRG3Q9BZD7 231 aa14.63□□□□□ -0.07
CCDC43-204ENST00000588687 A0A087X0M5 115 aa14.62□□□□□ -0.07
CCDC43-204ENST00000588687 IGKV1-12A0A0C4DH73 117 aa14.62□□□□□ -0.07
CCDC43-204ENST00000588687 A0A1B0GX30 115 aa14.62□□□□□ -0.07
CCDC43-204ENST00000588687 IGKV1D-12P01611 117 aa14.62□□□□□ -0.07
CCDC43-204ENST00000588687 KRT8P05787 483 aa14.62□□□□□ -0.07
CCDC43-204ENST00000588687 CALCBP10092 127 aa14.62□□□□□ -0.07
CCDC43-204ENST00000588687 CDK2P24941 298 aa14.62□□□□□ -0.07
CCDC43-204ENST00000588687 KIR3DL2P43630 455 aa14.62□□□□□ -0.07
CCDC43-204ENST00000588687 HLA-DRB5Q30154 266 aa14.62□□□□□ -0.07
CCDC43-204ENST00000588687 RTN4RL2Q86UN3 420 aa14.62□□□□□ -0.07
CCDC43-204ENST00000588687 MRPL41Q8IXM3 137 aaKnown RBP14.62□□□□□ -0.07
CCDC43-204ENST00000588687 YIPF7Q8N8F6 280 aa14.62□□□□□ -0.07
CCDC43-204ENST00000588687 CCDC54Q8NEL0 328 aa14.62□□□□□ -0.07
CCDC43-204ENST00000588687 ZNF596Q8TC21 504 aa14.62□□□□□ -0.07
CCDC43-204ENST00000588687 BCAS4Q8TDM0 211 aa14.62□□□□□ -0.07
CCDC43-204ENST00000588687 CORO2AQ92828 525 aa14.62□□□□□ -0.07
CCDC43-204ENST00000588687 C10orf35Q96D05 121 aa14.62□□□□□ -0.07
CCDC43-204ENST00000588687 ADAT3Q96EY9 351 aaPredicted RBP14.62□□□□□ -0.07
CCDC43-204ENST00000588687 HMG20AQ9NP66 347 aa14.62□□□□□ -0.07
CCDC43-204ENST00000588687 SACSQ9NZJ4 4579 aa14.62□□□□□ -0.07
CCDC43-204ENST00000588687 OR2H2O95918 312 aa14.61□□□□□ -0.07
CCDC43-204ENST00000588687 PRKACAP17612 351 aa14.61□□□□□ -0.07
CCDC43-204ENST00000588687 BRS3P32247 399 aa14.61□□□□□ -0.07
CCDC43-204ENST00000588687 CDC42P60953 191 aa14.61□□□□□ -0.07
CCDC43-204ENST00000588687 FLOT2Q14254 428 aa14.61□□□□□ -0.07
CCDC43-204ENST00000588687 TPTE2P1Q5T6R2 138 aa14.61□□□□□ -0.07
CCDC43-204ENST00000588687 RNF144BQ7Z419 303 aa14.61□□□□□ -0.07
CCDC43-204ENST00000588687 TRAPPC6BQ86SZ2 158 aa14.61□□□□□ -0.07
CCDC43-204ENST00000588687 SPATA24Q86W54 205 aa14.61□□□□□ -0.07
CCDC43-204ENST00000588687 GID4Q8IVV7 300 aa14.61□□□□□ -0.07
CCDC43-204ENST00000588687 PP6455Q8WZ26 134 aa14.61□□□□□ -0.07
CCDC43-204ENST00000588687 COQ2Q96H96 371 aa14.61□□□□□ -0.07
CCDC43-204ENST00000588687 IL4I1Q96RQ9 567 aa14.61□□□□□ -0.07
CCDC43-204ENST00000588687 GAL3ST2Q9H3Q3 398 aa14.61□□□□□ -0.07
CCDC43-204ENST00000588687 TAS2R3Q9NYW6 316 aa14.61□□□□□ -0.07
CCDC43-204ENST00000588687 METTL15A6NJ78 407 aa14.6□□□□□ -0.07
CCDC43-204ENST00000588687 LEUTXA8MZ59 168 aa14.6□□□□□ -0.07
CCDC43-204ENST00000588687 BUB1B-PAK6H3BSN5 160 aa14.6□□□□□ -0.07
CCDC43-204ENST00000588687 SIRPB1O00241 398 aa14.6□□□□□ -0.07
CCDC43-204ENST00000588687 SULT1C4O75897 302 aa14.6□□□□□ -0.07
CCDC43-204ENST00000588687 APOL3O95236 402 aa14.6□□□□□ -0.07
CCDC43-204ENST00000588687 LMO1P25800 156 aa14.6□□□□□ -0.07
CCDC43-204ENST00000588687 GLIPR1P48060 266 aa14.6□□□□□ -0.07
CCDC43-204ENST00000588687 POU3F4P49335 361 aa14.6□□□□□ -0.07
CCDC43-204ENST00000588687 RBP2P50120 134 aa14.6□□□□□ -0.07
CCDC43-204ENST00000588687 SNU13P55769 128 aaKnown RBP14.6□□□□□ -0.07
CCDC43-204ENST00000588687 DEFB121Q5J5C9 76 aa14.6□□□□□ -0.07
CCDC43-204ENST00000588687 KHDC1LQ5JSQ8 128 aa14.6□□□□□ -0.07
CCDC43-204ENST00000588687 OR52W1Q6IF63 320 aa14.6□□□□□ -0.07
CCDC43-204ENST00000588687 RDH10Q8IZV5 341 aa14.6□□□□□ -0.07
CCDC43-204ENST00000588687 WWC2-AS2Q96NR7 200 aa14.6□□□□□ -0.07
CCDC43-204ENST00000588687 COMMD4Q9H0A8 199 aa14.6□□□□□ -0.07
CCDC43-204ENST00000588687 WARS2Q9UGM6 360 aaKnown RBP14.6□□□□□ -0.07
CCDC43-204ENST00000588687 TRGV10A0A0A0MS01 117 aa14.59□□□□□ -0.07
CCDC43-204ENST00000588687 FAM90A18PA6NE21 464 aa14.59□□□□□ -0.07
CCDC43-204ENST00000588687 FAM90A16PA6NEW6 464 aa14.59□□□□□ -0.07
CCDC43-204ENST00000588687 FAM90A20PA6NIJ5 464 aa14.59□□□□□ -0.07
CCDC43-204ENST00000588687 FAM90A9PA6NNJ1 464 aa14.59□□□□□ -0.07
CCDC43-204ENST00000588687 FAM90A12PA8MX19 464 aa14.59□□□□□ -0.07
CCDC43-204ENST00000588687 FAM90A5PA8MXJ8 464 aa14.59□□□□□ -0.07
CCDC43-204ENST00000588687 CSN2P05814 226 aa14.59□□□□□ -0.07
CCDC43-204ENST00000588687 OR2T7P0C7T2 308 aa14.59□□□□□ -0.07
CCDC43-204ENST00000588687 FAM90A15PP0C7V4 464 aa14.59□□□□□ -0.07
CCDC43-204ENST00000588687 FAM90A13PP0C7W8 464 aa14.59□□□□□ -0.07
CCDC43-204ENST00000588687 FAM90A14PP0C7W9 464 aa14.59□□□□□ -0.07
CCDC43-204ENST00000588687 FAM90A24PP0C7X0 464 aa14.59□□□□□ -0.07
CCDC43-204ENST00000588687 UBCP0CG48 685 aaKnown RBP14.59□□□□□ -0.07
CCDC43-204ENST00000588687 HTR1FP30939 366 aa14.59□□□□□ -0.07
CCDC43-204ENST00000588687 THBS3P49746 956 aa14.59□□□□□ -0.07
CCDC43-204ENST00000588687 C17orf58Q2M2W7 97 aa14.59□□□□□ -0.07
CCDC43-204ENST00000588687 KDM4DQ6B0I6 523 aa14.59□□□□□ -0.07
CCDC43-204ENST00000588687 C18orf65Q6ZTR6 163 aa14.59□□□□□ -0.07
CCDC43-204ENST00000588687 UTS2BQ765I0 119 aa14.59□□□□□ -0.07
CCDC43-204ENST00000588687 KRT84Q9NSB2 600 aa14.59□□□□□ -0.07
CCDC43-204ENST00000588687 H2AFY2Q9P0M6 372 aaPredicted RBP14.59□□□□□ -0.07
CCDC43-204ENST00000588687 POMPQ9Y244 141 aa14.59□□□□□ -0.07
CCDC43-204ENST00000588687 ODAMA1E959 279 aa14.58□□□□□ -0.08
CCDC43-204ENST00000588687 H3BUI4 141 aa14.58□□□□□ -0.08
CCDC43-204ENST00000588687 M0QZK8 103 aa14.58□□□□□ -0.08
CCDC43-204ENST00000588687 KDM4BO94953 1096 aa14.58□□□□□ -0.08
CCDC43-204ENST00000588687 CLIC3O95833 236 aa14.58□□□□□ -0.08
CCDC43-204ENST00000588687 ATP1B3P54709 279 aa14.58□□□□□ -0.08
CCDC43-204ENST00000588687 RPL23AP62750 156 aaKnown RBP14.58□□□□□ -0.08
CCDC43-204ENST00000588687 ZNF85Q03923 595 aa14.58□□□□□ -0.08
CCDC43-204ENST00000588687 CD69Q07108 199 aa14.58□□□□□ -0.08
CCDC43-204ENST00000588687 AESQ08117 197 aa14.58□□□□□ -0.08
CCDC43-204ENST00000588687 PDZK1IP1Q13113 114 aa14.58□□□□□ -0.08
CCDC43-204ENST00000588687 CAPSLQ8WWF8 208 aa14.58□□□□□ -0.08
CCDC43-204ENST00000588687 GABARAPL1Q9H0R8 117 aa14.58□□□□□ -0.08
CCDC43-204ENST00000588687 EXOSC4Q9NPD3 245 aaKnown RBP14.58□□□□□ -0.08
CCDC43-204ENST00000588687 GSTK1Q9Y2Q3 226 aa14.58□□□□□ -0.08
CCDC43-204ENST00000588687 MOB4Q9Y3A3 225 aa14.58□□□□□ -0.08
CCDC43-204ENST00000588687 PCDHGB5Q9Y5G0 923 aa14.58□□□□□ -0.08
CCDC43-204ENST00000588687 HSPE1-MOB4S4R3N1 261 aa14.58□□□□□ -0.08
CCDC43-204ENST00000588687 PSMB11A5LHX3 300 aa14.57□□□□□ -0.08
CCDC43-204ENST00000588687 OOSP1A8MZH6 123 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms