RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 A0A1W2PQ09 198 aa16.85■□□□□ 0.29
ATG4D-208ENST00000588667 LGALS8O00214 317 aa16.85■□□□□ 0.29
ATG4D-208ENST00000588667 ZNF16P17020 682 aaPredicted RBP16.85■□□□□ 0.29
ATG4D-208ENST00000588667 CD80P33681 288 aa16.85■□□□□ 0.29
ATG4D-208ENST00000588667 INPP1P49441 399 aa16.85■□□□□ 0.29
ATG4D-208ENST00000588667 GPR176Q14439 515 aa16.85■□□□□ 0.29
ATG4D-208ENST00000588667 SLC22A6Q4U2R8 563 aa16.85■□□□□ 0.29
ATG4D-208ENST00000588667 BOLLQ8N9W6 283 aaKnown RBP16.85■□□□□ 0.29
ATG4D-208ENST00000588667 SETD6Q8TBK2 473 aa16.85■□□□□ 0.29
ATG4D-208ENST00000588667 URM1Q9BTM9 101 aaKnown RBP16.85■□□□□ 0.29
ATG4D-208ENST00000588667 TMEM59Q9BXS4 323 aa16.85■□□□□ 0.29
ATG4D-208ENST00000588667 ELL3Q9HB65 397 aaPredicted RBP16.85■□□□□ 0.29
ATG4D-208ENST00000588667 PCDHB10Q9UN67 800 aa16.85■□□□□ 0.29
ATG4D-208ENST00000588667 SRRM5B3KS81 715 aa16.84■□□□□ 0.29
ATG4D-208ENST00000588667 ZNF780AO75290 641 aaPredicted RBP16.84■□□□□ 0.29
ATG4D-208ENST00000588667 CRTAPO75718 401 aaPredicted RBP16.84■□□□□ 0.29
ATG4D-208ENST00000588667 HLA-DQB1P01920 261 aa16.84■□□□□ 0.29
ATG4D-208ENST00000588667 HOXA4Q00056 320 aaPredicted RBP16.84■□□□□ 0.29
ATG4D-208ENST00000588667 KCNJ8Q15842 424 aa16.84■□□□□ 0.29
ATG4D-208ENST00000588667 HACD4Q5VWC8 232 aa16.84■□□□□ 0.29
ATG4D-208ENST00000588667 HAGHLQ6PII5 290 aaPredicted RBP16.84■□□□□ 0.29
ATG4D-208ENST00000588667 LINC01356Q8N9X3 169 aa16.84■□□□□ 0.29
ATG4D-208ENST00000588667 AQP3Q92482 292 aa16.84■□□□□ 0.29
ATG4D-208ENST00000588667 TMEM246Q9BRR3 403 aa16.84■□□□□ 0.29
ATG4D-208ENST00000588667 THAP7Q9BT49 309 aaPredicted RBP16.84■□□□□ 0.29
ATG4D-208ENST00000588667 METTL9Q9H1A3 318 aa16.84■□□□□ 0.29
ATG4D-208ENST00000588667 PATZ1Q9HBE1 687 aaKnown RBP16.84■□□□□ 0.29
ATG4D-208ENST00000588667 TRAV38-1A0A0B4J264 116 aa16.83■□□□□ 0.28
ATG4D-208ENST00000588667 OOEPA6NGQ2 149 aa16.83■□□□□ 0.28
ATG4D-208ENST00000588667 CEACAM18A8MTB9 384 aa16.83■□□□□ 0.28
ATG4D-208ENST00000588667 B4DSR2 109 aa16.83■□□□□ 0.28
ATG4D-208ENST00000588667 FAM157AC9JC47 383 aa16.83■□□□□ 0.28
ATG4D-208ENST00000588667 C3orf80F5H4A9 247 aa16.83■□□□□ 0.28
ATG4D-208ENST00000588667 J3QT63 122 aa16.83■□□□□ 0.28
ATG4D-208ENST00000588667 GSTZ1O43708 216 aaPredicted RBP16.83■□□□□ 0.28
ATG4D-208ENST00000588667 KDM4BO94953 1096 aa16.83■□□□□ 0.28
ATG4D-208ENST00000588667 MPIG6BO95866 241 aa16.83■□□□□ 0.28
ATG4D-208ENST00000588667 EGR1P18146 543 aa16.83■□□□□ 0.28
ATG4D-208ENST00000588667 CPT2P23786 658 aa16.83■□□□□ 0.28
ATG4D-208ENST00000588667 HAAOP46952 286 aa16.83■□□□□ 0.28
ATG4D-208ENST00000588667 PDZK1IP1Q13113 114 aa16.83■□□□□ 0.28
ATG4D-208ENST00000588667 RSU1Q15404 277 aa16.83■□□□□ 0.28
ATG4D-208ENST00000588667 TEX36Q5VZQ5 186 aa16.83■□□□□ 0.28
ATG4D-208ENST00000588667 C1QL2Q7Z5L3 287 aa16.83■□□□□ 0.28
ATG4D-208ENST00000588667 POC5Q8NA72 575 aa16.83■□□□□ 0.28
ATG4D-208ENST00000588667 ZSCAN4Q8NAM6 433 aaPredicted RBP16.83■□□□□ 0.28
ATG4D-208ENST00000588667 TMEM104Q8NE00 496 aa16.83■□□□□ 0.28
ATG4D-208ENST00000588667 PXT1Q8NFP0 134 aa16.83■□□□□ 0.28
ATG4D-208ENST00000588667 SMIM4Q8WVI0 70 aa16.83■□□□□ 0.28
ATG4D-208ENST00000588667 NUDT16L1Q9BRJ7 211 aaKnown RBP16.83■□□□□ 0.28
ATG4D-208ENST00000588667 PCDHB16Q9NRJ7 776 aa16.83■□□□□ 0.28
ATG4D-208ENST00000588667 FN1P02751 2386 aaKnown RBP16.83■□□□□ 0.28
ATG4D-208ENST00000588667 TRAV18A0A075B6X5 111 aa16.82■□□□□ 0.28
ATG4D-208ENST00000588667 F5H0A9 414 aaPredicted RBP16.82■□□□□ 0.28
ATG4D-208ENST00000588667 GABARAPH6UMI1 98 aa16.82■□□□□ 0.28
ATG4D-208ENST00000588667 PLATP00750 562 aa16.82■□□□□ 0.28
ATG4D-208ENST00000588667 CHRM2P08172 466 aa16.82■□□□□ 0.28
ATG4D-208ENST00000588667 SFRP4Q6FHJ7 346 aaPredicted RBP16.82■□□□□ 0.28
ATG4D-208ENST00000588667 ASCL4Q6XD76 172 aa16.82■□□□□ 0.28
ATG4D-208ENST00000588667 DCDC5Q6ZRR9 648 aa16.82■□□□□ 0.28
ATG4D-208ENST00000588667 Q71RC1 249 aaPredicted RBP16.82■□□□□ 0.28
ATG4D-208ENST00000588667 MINDY2Q8NBR6 621 aa16.82■□□□□ 0.28
ATG4D-208ENST00000588667 DEFB108BQ8NET1 73 aa16.82■□□□□ 0.28
ATG4D-208ENST00000588667 POLDIP2Q9Y2S7 368 aa16.82■□□□□ 0.28
ATG4D-208ENST00000588667 ARHGAP32A7KAX9 2087 aa16.82■□□□□ 0.28
ATG4D-208ENST00000588667 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.81■□□□□ 0.28
ATG4D-208ENST00000588667 SPRY1O43609 319 aaPredicted RBP16.81■□□□□ 0.28
ATG4D-208ENST00000588667 RHBDL1O75783 438 aa16.81■□□□□ 0.28
ATG4D-208ENST00000588667 CSTBP04080 98 aaKnown RBP16.81■□□□□ 0.28
ATG4D-208ENST00000588667 RPS2P15880 293 aaKnown RBP16.81■□□□□ 0.28
ATG4D-208ENST00000588667 MGMTP16455 207 aa16.81■□□□□ 0.28
ATG4D-208ENST00000588667 SERPINA2P20848 420 aa16.81■□□□□ 0.28
ATG4D-208ENST00000588667 CHPT1Q8WUD6 406 aa16.81■□□□□ 0.28
ATG4D-208ENST00000588667 FCAMRQ8WWV6 532 aa16.81■□□□□ 0.28
ATG4D-208ENST00000588667 LPAR5Q9H1C0 372 aa16.81■□□□□ 0.28
ATG4D-208ENST00000588667 BANF2Q9H503 90 aa16.81■□□□□ 0.28
ATG4D-208ENST00000588667 MIOXQ9UGB7 285 aa16.81■□□□□ 0.28
ATG4D-208ENST00000588667 AKR7A2O43488 359 aa16.81■□□□□ 0.28
ATG4D-208ENST00000588667 ANGPTL7O43827 346 aa16.81■□□□□ 0.28
ATG4D-208ENST00000588667 CYB5AP00167 134 aa16.81■□□□□ 0.28
ATG4D-208ENST00000588667 TGFAP01135 160 aa16.81■□□□□ 0.28
ATG4D-208ENST00000588667 MSMBP08118 114 aa16.81■□□□□ 0.28
ATG4D-208ENST00000588667 MUC1P15941 1255 aaPredicted RBP16.81■□□□□ 0.28
ATG4D-208ENST00000588667 MPZP25189 248 aa16.81■□□□□ 0.28
ATG4D-208ENST00000588667 RPS27AP62979 156 aaKnown RBP16.81■□□□□ 0.28
ATG4D-208ENST00000588667 DGCR2P98153 550 aa16.81■□□□□ 0.28
ATG4D-208ENST00000588667 MICBQ29980 383 aa16.81■□□□□ 0.28
ATG4D-208ENST00000588667 TRIM16LQ309B1 348 aa16.81■□□□□ 0.28
ATG4D-208ENST00000588667 FAM90A1Q86YD7 464 aa16.81■□□□□ 0.28
ATG4D-208ENST00000588667 SAXO1Q8IYX7 474 aa16.81■□□□□ 0.28
ATG4D-208ENST00000588667 OR51F2Q8NH61 342 aa16.81■□□□□ 0.28
ATG4D-208ENST00000588667 TRIM63Q969Q1 353 aa16.81■□□□□ 0.28
ATG4D-208ENST00000588667 PKIBQ9C010 78 aa16.81■□□□□ 0.28
ATG4D-208ENST00000588667 IL36GQ9NZH8 169 aa16.81■□□□□ 0.28
ATG4D-208ENST00000588667 SETD2Q9BYW2 2564 aaPredicted RBP16.8■□□□□ 0.28
ATG4D-208ENST00000588667 RAB27BO00194 218 aa16.8■□□□□ 0.28
ATG4D-208ENST00000588667 NDUFA2O43678 99 aa16.8■□□□□ 0.28
ATG4D-208ENST00000588667 PTTG1O95997 202 aa16.8■□□□□ 0.28
ATG4D-208ENST00000588667 GTF2F2P13984 249 aa16.8■□□□□ 0.28
ATG4D-208ENST00000588667 VEGFCP49767 419 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms