RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 FAM220AQ7Z4H9 259 aa12.15□□□□□ -0.46
PRKCSH-204ENST00000587290 GABARAPL3Q9BY60 117 aa12.15□□□□□ -0.46
PRKCSH-204ENST00000587290 ZNF286AQ9HBT8 521 aa12.15□□□□□ -0.46
PRKCSH-204ENST00000587290 NECAP2Q9NVZ3 263 aa12.15□□□□□ -0.46
PRKCSH-204ENST00000587290 FRRS1LQ9P0K9 344 aa12.15□□□□□ -0.46
PRKCSH-204ENST00000587290 AASSQ9UDR5 926 aa12.15□□□□□ -0.46
PRKCSH-204ENST00000587290 MGST3O14880 152 aa12.14□□□□□ -0.47
PRKCSH-204ENST00000587290 LPLP06858 475 aa12.14□□□□□ -0.47
PRKCSH-204ENST00000587290 ZNF20P17024 532 aa12.14□□□□□ -0.47
PRKCSH-204ENST00000587290 CD83Q01151 205 aa12.14□□□□□ -0.47
PRKCSH-204ENST00000587290 SCN1BQ07699 218 aa12.14□□□□□ -0.47
PRKCSH-204ENST00000587290 ZNF146Q15072 292 aa12.14□□□□□ -0.47
PRKCSH-204ENST00000587290 ABCA11PQ4W5N1 156 aa12.14□□□□□ -0.47
PRKCSH-204ENST00000587290 REC114Q7Z4M0 266 aa12.14□□□□□ -0.47
PRKCSH-204ENST00000587290 ABHD12Q8N2K0 398 aa12.14□□□□□ -0.47
PRKCSH-204ENST00000587290 DTX3Q8N9I9 347 aa12.14□□□□□ -0.47
PRKCSH-204ENST00000587290 OR13C9Q8NGT0 318 aa12.14□□□□□ -0.47
PRKCSH-204ENST00000587290 PP6455Q8WZ26 134 aa12.14□□□□□ -0.47
PRKCSH-204ENST00000587290 HMG20AQ9NP66 347 aa12.14□□□□□ -0.47
PRKCSH-204ENST00000587290 ALX3O95076 343 aa12.13□□□□□ -0.47
PRKCSH-204ENST00000587290 CYB5AP00167 134 aa12.13□□□□□ -0.47
PRKCSH-204ENST00000587290 PF4V1P10720 104 aa12.13□□□□□ -0.47
PRKCSH-204ENST00000587290 CD33P20138 364 aa12.13□□□□□ -0.47
PRKCSH-204ENST00000587290 LOXL3P58215 753 aa12.13□□□□□ -0.47
PRKCSH-204ENST00000587290 BNIP1Q12981 228 aa12.13□□□□□ -0.47
PRKCSH-204ENST00000587290 PDZK1IP1Q13113 114 aa12.13□□□□□ -0.47
PRKCSH-204ENST00000587290 ATXN7L3Q14CW9 347 aaPredicted RBP12.13□□□□□ -0.47
PRKCSH-204ENST00000587290 C1orf146Q5VVC0 180 aa12.13□□□□□ -0.47
PRKCSH-204ENST00000587290 Q8IYB0 196 aa12.13□□□□□ -0.47
PRKCSH-204ENST00000587290 ENTHD1Q8IYW4 607 aa12.13□□□□□ -0.47
PRKCSH-204ENST00000587290 DNAAF1Q8NEP3 725 aa12.13□□□□□ -0.47
PRKCSH-204ENST00000587290 OR8J1Q8NGP2 316 aa12.13□□□□□ -0.47
PRKCSH-204ENST00000587290 COQ2Q96H96 371 aa12.13□□□□□ -0.47
PRKCSH-204ENST00000587290 OPALINQ96PE5 141 aa12.13□□□□□ -0.47
PRKCSH-204ENST00000587290 SLC25A33Q9BSK2 321 aa12.13□□□□□ -0.47
PRKCSH-204ENST00000587290 PPIL3Q9H2H8 161 aaKnown RBP12.13□□□□□ -0.47
PRKCSH-204ENST00000587290 EXOSC4Q9NPD3 245 aaKnown RBP12.13□□□□□ -0.47
PRKCSH-204ENST00000587290 UBE2J1Q9Y385 318 aaPredicted RBP12.13□□□□□ -0.47
PRKCSH-204ENST00000587290 TRGV10A0A0A0MS01 117 aa12.12□□□□□ -0.47
PRKCSH-204ENST00000587290 HSPB6O14558 160 aa12.12□□□□□ -0.47
PRKCSH-204ENST00000587290 MPIG6BO95866 241 aa12.12□□□□□ -0.47
PRKCSH-204ENST00000587290 IGHV3-7P01780 117 aa12.12□□□□□ -0.47
PRKCSH-204ENST00000587290 AMY1AP04745 511 aa12.12□□□□□ -0.47
PRKCSH-204ENST00000587290 AMY2AP04746 511 aa12.12□□□□□ -0.47
PRKCSH-204ENST00000587290 ZNF44P15621 663 aa12.12□□□□□ -0.47
PRKCSH-204ENST00000587290 RBM39Q14498 530 aaKnown RBP12.12□□□□□ -0.47
PRKCSH-204ENST00000587290 KHDC1LQ5JSQ8 128 aa12.12□□□□□ -0.47
PRKCSH-204ENST00000587290 SPIN3Q5JUX0 258 aa12.12□□□□□ -0.47
PRKCSH-204ENST00000587290 LHFPL2Q6ZUX7 228 aa12.12□□□□□ -0.47
PRKCSH-204ENST00000587290 UTS2BQ765I0 119 aa12.12□□□□□ -0.47
PRKCSH-204ENST00000587290 CCDC54Q8NEL0 328 aa12.12□□□□□ -0.47
PRKCSH-204ENST00000587290 MYDGFQ969H8 173 aa12.12□□□□□ -0.47
PRKCSH-204ENST00000587290 C10orf35Q96D05 121 aa12.12□□□□□ -0.47
PRKCSH-204ENST00000587290 RNFT2Q96EX2 444 aa12.12□□□□□ -0.47
PRKCSH-204ENST00000587290 MBOAT4Q96T53 435 aa12.12□□□□□ -0.47
PRKCSH-204ENST00000587290 OSBPL10Q9BXB5 764 aa12.12□□□□□ -0.47
PRKCSH-204ENST00000587290 NEK6Q9HC98 313 aa12.12□□□□□ -0.47
PRKCSH-204ENST00000587290 DPM3Q9P2X0 92 aa12.12□□□□□ -0.47
PRKCSH-204ENST00000587290 ENOPH1Q9UHY7 261 aa12.12□□□□□ -0.47
PRKCSH-204ENST00000587290 DNAH9Q9NYC9 4486 aa12.12□□□□□ -0.47
PRKCSH-204ENST00000587290 TCRBV4S1A1TA0A5B7 111 aa12.11□□□□□ -0.47
PRKCSH-204ENST00000587290 ODAMA1E959 279 aa12.11□□□□□ -0.47
PRKCSH-204ENST00000587290 SH2D1BO14796 132 aa12.11□□□□□ -0.47
PRKCSH-204ENST00000587290 SLC16A6O15403 523 aa12.11□□□□□ -0.47
PRKCSH-204ENST00000587290 IGLV1-47P01700 117 aa12.11□□□□□ -0.47
PRKCSH-204ENST00000587290 OCM2P0CE71 109 aa12.11□□□□□ -0.47
PRKCSH-204ENST00000587290 OCMP0CE72 109 aaPredicted RBP12.11□□□□□ -0.47
PRKCSH-204ENST00000587290 PRKACBP22694 351 aa12.11□□□□□ -0.47
PRKCSH-204ENST00000587290 ERP29P30040 261 aaKnown RBP12.11□□□□□ -0.47
PRKCSH-204ENST00000587290 OR3A4PP47883 348 aa12.11□□□□□ -0.47
PRKCSH-204ENST00000587290 BDH1Q02338 343 aa12.11□□□□□ -0.47
PRKCSH-204ENST00000587290 IL18R1Q13478 541 aa12.11□□□□□ -0.47
PRKCSH-204ENST00000587290 C9orf152Q5JTZ5 239 aa12.11□□□□□ -0.47
PRKCSH-204ENST00000587290 TMEM244Q5VVB8 128 aa12.11□□□□□ -0.47
PRKCSH-204ENST00000587290 LPCAT4Q643R3 524 aa12.11□□□□□ -0.47
PRKCSH-204ENST00000587290 HEPN1Q6WQI6 88 aa12.11□□□□□ -0.47
PRKCSH-204ENST00000587290 CENPVQ7Z7K6 275 aaPredicted RBP12.11□□□□□ -0.47
PRKCSH-204ENST00000587290 OR13C3Q8NGS6 347 aa12.11□□□□□ -0.47
PRKCSH-204ENST00000587290 STMN2Q93045 179 aa12.11□□□□□ -0.47
PRKCSH-204ENST00000587290 LEAP2Q969E1 77 aa12.11□□□□□ -0.47
PRKCSH-204ENST00000587290 RFKQ969G6 155 aa12.11□□□□□ -0.47
PRKCSH-204ENST00000587290 SPSB1Q96BD6 273 aa12.11□□□□□ -0.47
PRKCSH-204ENST00000587290 PELI1Q96FA3 418 aa12.11□□□□□ -0.47
PRKCSH-204ENST00000587290 C4orf36Q96KX1 117 aa12.11□□□□□ -0.47
PRKCSH-204ENST00000587290 GAL3ST2Q9H3Q3 398 aa12.11□□□□□ -0.47
PRKCSH-204ENST00000587290 LIN7BQ9HAP6 207 aa12.11□□□□□ -0.47
PRKCSH-204ENST00000587290 SEBOXQ9HB31 216 aaPredicted RBP12.11□□□□□ -0.47
PRKCSH-204ENST00000587290 IMPAD1Q9NX62 359 aa12.11□□□□□ -0.47
PRKCSH-204ENST00000587290 COL7A1Q02388 2944 aa12.1□□□□□ -0.47
PRKCSH-204ENST00000587290 DAPL1A0PJW8 107 aa12.1□□□□□ -0.47
PRKCSH-204ENST00000587290 J3QLW9 94 aa12.1□□□□□ -0.47
PRKCSH-204ENST00000587290 J3QRE1 110 aa12.1□□□□□ -0.47
PRKCSH-204ENST00000587290 K7EIL1 84 aa12.1□□□□□ -0.47
PRKCSH-204ENST00000587290 SLC33A1O00400 549 aaPredicted RBP12.1□□□□□ -0.47
PRKCSH-204ENST00000587290 KDM4BO94953 1096 aa12.1□□□□□ -0.47
PRKCSH-204ENST00000587290 PF4P02776 101 aa12.1□□□□□ -0.47
PRKCSH-204ENST00000587290 ALDOBP05062 364 aa12.1□□□□□ -0.47
PRKCSH-204ENST00000587290 HTR1AP08908 422 aa12.1□□□□□ -0.47
PRKCSH-204ENST00000587290 ZNF19P17023 458 aa12.1□□□□□ -0.47
PRKCSH-204ENST00000587290 NFYBP25208 207 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms