RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 PMELP40967 661 aa17.33■□□□□ 0.37
ATG4D-204ENST00000586417 DYRK2Q92630 601 aa17.33■□□□□ 0.37
ATG4D-204ENST00000586417 ZNF221Q9UK13 617 aa17.33■□□□□ 0.37
ATG4D-204ENST00000586417 SPEF1Q9Y4P9 236 aa17.33■□□□□ 0.37
ATG4D-204ENST00000586417 IGKV1D-8A0A087WSZ0 117 aa17.33■□□□□ 0.36
ATG4D-204ENST00000586417 C3orf80F5H4A9 247 aa17.33■□□□□ 0.36
ATG4D-204ENST00000586417 PRKACAP17612 351 aa17.33■□□□□ 0.36
ATG4D-204ENST00000586417 EIF2B2P49770 351 aaKnown RBP17.33■□□□□ 0.36
ATG4D-204ENST00000586417 ERVK11-1P61568 191 aa17.33■□□□□ 0.36
ATG4D-204ENST00000586417 FCN2Q15485 313 aa17.33■□□□□ 0.36
ATG4D-204ENST00000586417 MPV17LQ2QL34 196 aa17.33■□□□□ 0.36
ATG4D-204ENST00000586417 SCGB2B2Q4G0G5 96 aa17.33■□□□□ 0.36
ATG4D-204ENST00000586417 METTL11BQ5VVY1 283 aa17.33■□□□□ 0.36
ATG4D-204ENST00000586417 LRP11Q86VZ4 500 aa17.33■□□□□ 0.36
ATG4D-204ENST00000586417 MED30Q96HR3 178 aa17.33■□□□□ 0.36
ATG4D-204ENST00000586417 CMSS1Q9BQ75 279 aaKnown RBP17.33■□□□□ 0.36
ATG4D-204ENST00000586417 SEC22CQ9BRL7 303 aa17.33■□□□□ 0.36
ATG4D-204ENST00000586417 PLK3Q9H4B4 646 aa17.33■□□□□ 0.36
ATG4D-204ENST00000586417 RHOFQ9HBH0 211 aa17.33■□□□□ 0.36
ATG4D-204ENST00000586417 RANGRFQ9HD47 186 aaPredicted RBP17.33■□□□□ 0.36
ATG4D-204ENST00000586417 ZNF701Q9NV72 531 aaPredicted RBP17.33■□□□□ 0.36
ATG4D-204ENST00000586417 PLCE1Q9P212 2302 aa17.32■□□□□ 0.36
ATG4D-204ENST00000586417 SIAH2O43255 324 aa17.32■□□□□ 0.36
ATG4D-204ENST00000586417 IGFBP2P18065 325 aa17.32■□□□□ 0.36
ATG4D-204ENST00000586417 DTYMKP23919 212 aa17.32■□□□□ 0.36
ATG4D-204ENST00000586417 BSPH1Q075Z2 132 aa17.32■□□□□ 0.36
ATG4D-204ENST00000586417 CD276Q5ZPR3 534 aa17.32■□□□□ 0.36
ATG4D-204ENST00000586417 FAM58AQ8N1B3 248 aa17.32■□□□□ 0.36
ATG4D-204ENST00000586417 TMEM171Q8WVE6 324 aa17.32■□□□□ 0.36
ATG4D-204ENST00000586417 MED28Q9H204 178 aa17.32■□□□□ 0.36
ATG4D-204ENST00000586417 CXXC4Q9H2H0 198 aa17.32■□□□□ 0.36
ATG4D-204ENST00000586417 MSL2Q9HCI7 577 aa17.32■□□□□ 0.36
ATG4D-204ENST00000586417 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.31■□□□□ 0.36
ATG4D-204ENST00000586417 UBE2QL1A1L167 161 aa17.31■□□□□ 0.36
ATG4D-204ENST00000586417 CDIPTO14735 213 aa17.31■□□□□ 0.36
ATG4D-204ENST00000586417 IGHV3-13P01766 116 aa17.31■□□□□ 0.36
ATG4D-204ENST00000586417 RLN1P04808 185 aa17.31■□□□□ 0.36
ATG4D-204ENST00000586417 FCGR3AP08637 254 aa17.31■□□□□ 0.36
ATG4D-204ENST00000586417 PGA5P0DJD9 388 aa17.31■□□□□ 0.36
ATG4D-204ENST00000586417 CD83Q01151 205 aa17.31■□□□□ 0.36
ATG4D-204ENST00000586417 MAB21L1Q13394 359 aa17.31■□□□□ 0.36
ATG4D-204ENST00000586417 IL13RA2Q14627 380 aa17.31■□□□□ 0.36
ATG4D-204ENST00000586417 TMEM108Q6UXF1 575 aa17.31■□□□□ 0.36
ATG4D-204ENST00000586417 LINC00596Q86U02 117 aa17.31■□□□□ 0.36
ATG4D-204ENST00000586417 ARRDC1Q8N5I2 433 aa17.31■□□□□ 0.36
ATG4D-204ENST00000586417 OR13G1Q8NGZ3 307 aa17.31■□□□□ 0.36
ATG4D-204ENST00000586417 FYTTD1Q96QD9 318 aaKnown RBP17.31■□□□□ 0.36
ATG4D-204ENST00000586417 NRIP2Q9BQI9 281 aa17.31■□□□□ 0.36
ATG4D-204ENST00000586417 CHST6Q9GZX3 395 aa17.31■□□□□ 0.36
ATG4D-204ENST00000586417 TLNRD1Q9H1K6 362 aa17.31■□□□□ 0.36
ATG4D-204ENST00000586417 POLDIP2Q9Y2S7 368 aa17.31■□□□□ 0.36
ATG4D-204ENST00000586417 ABCA4P78363 2273 aa17.31■□□□□ 0.36
ATG4D-204ENST00000586417 OR2AT4A6NND4 320 aa17.3■□□□□ 0.36
ATG4D-204ENST00000586417 F5H5P2 479 aa17.3■□□□□ 0.36
ATG4D-204ENST00000586417 ATPAF1Q5TC12 328 aaPredicted RBP17.3■□□□□ 0.36
ATG4D-204ENST00000586417 Q6ZPA2 131 aa17.3■□□□□ 0.36
ATG4D-204ENST00000586417 C11orf53Q8IXP5 236 aa17.3■□□□□ 0.36
ATG4D-204ENST00000586417 OR11H7Q8NGC8 314 aa17.3■□□□□ 0.36
ATG4D-204ENST00000586417 OR5H2Q8NGV7 314 aa17.3■□□□□ 0.36
ATG4D-204ENST00000586417 EDARQ9UNE0 448 aa17.3■□□□□ 0.36
ATG4D-204ENST00000586417 ICE1Q9Y2F5 2266 aa17.3■□□□□ 0.36
ATG4D-204ENST00000586417 IGLV3-9A0A075B6K5 115 aa17.3■□□□□ 0.36
ATG4D-204ENST00000586417 IGHV3-64DA0A0J9YX35 117 aa17.3■□□□□ 0.36
ATG4D-204ENST00000586417 TMEM82A0PJX8 343 aa17.3■□□□□ 0.36
ATG4D-204ENST00000586417 TPD52L2O43399 206 aaKnown RBP17.3■□□□□ 0.36
ATG4D-204ENST00000586417 CLDN1O95832 211 aa17.3■□□□□ 0.36
ATG4D-204ENST00000586417 IFNA6P05013 189 aa17.3■□□□□ 0.36
ATG4D-204ENST00000586417 GRPP07492 148 aa17.3■□□□□ 0.36
ATG4D-204ENST00000586417 DUSP1P28562 367 aa17.3■□□□□ 0.36
ATG4D-204ENST00000586417 TAS2R46P59540 309 aa17.3■□□□□ 0.36
ATG4D-204ENST00000586417 ZNF626Q68DY1 528 aa17.3■□□□□ 0.36
ATG4D-204ENST00000586417 SPERTQ8NA61 448 aa17.3■□□□□ 0.36
ATG4D-204ENST00000586417 DRAXINQ8NBI3 349 aaPredicted RBP17.3■□□□□ 0.36
ATG4D-204ENST00000586417 OR5AP2Q8NGF4 316 aa17.3■□□□□ 0.36
ATG4D-204ENST00000586417 DACT3Q96B18 629 aaPredicted RBP17.3■□□□□ 0.36
ATG4D-204ENST00000586417 PLPPR2Q96GM1 343 aa17.3■□□□□ 0.36
ATG4D-204ENST00000586417 ALX4Q9H161 411 aaPredicted RBP17.3■□□□□ 0.36
ATG4D-204ENST00000586417 ZNF442Q9H7R0 627 aa17.3■□□□□ 0.36
ATG4D-204ENST00000586417 NGBQ9NPG2 151 aa17.3■□□□□ 0.36
ATG4D-204ENST00000586417 VSIG4Q9Y279 399 aa17.3■□□□□ 0.36
ATG4D-204ENST00000586417 FASNP49327 2511 aaKnown RBP17.29■□□□□ 0.36
ATG4D-204ENST00000586417 PKDREJQ9NTG1 2253 aa17.29■□□□□ 0.36
ATG4D-204ENST00000586417 SNRPGP15A8MWD9 76 aa17.29■□□□□ 0.36
ATG4D-204ENST00000586417 ABCD4O14678 606 aa17.29■□□□□ 0.36
ATG4D-204ENST00000586417 ACAA1P09110 424 aaPredicted RBP17.29■□□□□ 0.36
ATG4D-204ENST00000586417 PTAFRP25105 342 aa17.29■□□□□ 0.36
ATG4D-204ENST00000586417 IKZF1Q13422 519 aa17.29■□□□□ 0.36
ATG4D-204ENST00000586417 OVCH2Q7RTZ1 564 aa17.29■□□□□ 0.36
ATG4D-204ENST00000586417 DMRTC2Q8IXT2 367 aaPredicted RBP17.29■□□□□ 0.36
ATG4D-204ENST00000586417 Q8IYB0 196 aa17.29■□□□□ 0.36
ATG4D-204ENST00000586417 TCTE3Q8IZS6 198 aa17.29■□□□□ 0.36
ATG4D-204ENST00000586417 GTF3AQ92664 365 aaKnown RBP17.29■□□□□ 0.36
ATG4D-204ENST00000586417 FN3KRPQ9HA64 309 aa17.29■□□□□ 0.36
ATG4D-204ENST00000586417 MYOZ1Q9NP98 299 aaPredicted RBP17.29■□□□□ 0.36
ATG4D-204ENST00000586417 C12orf4Q9NQ89 552 aa17.29■□□□□ 0.36
ATG4D-204ENST00000586417 DUSP13Q9UII6 198 aa17.29■□□□□ 0.36
ATG4D-204ENST00000586417 KLF2Q9Y5W3 355 aaPredicted RBP17.29■□□□□ 0.36
ATG4D-204ENST00000586417 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.28■□□□□ 0.36
ATG4D-204ENST00000586417 A1L4Q6 167 aa17.28■□□□□ 0.36
ATG4D-204ENST00000586417 FAM221AA4D161 298 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms