RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 TRIM77I1YAP6 450 aa13.32□□□□□ -0.28
ERBB2-222ENST00000584908 DENRO43583 198 aaKnown RBP13.32□□□□□ -0.28
ERBB2-222ENST00000584908 SC5DO75845 299 aa13.32□□□□□ -0.28
ERBB2-222ENST00000584908 MAPK3P27361 379 aaPredicted RBP13.32□□□□□ -0.28
ERBB2-222ENST00000584908 DUSP1P28562 367 aa13.32□□□□□ -0.28
ERBB2-222ENST00000584908 ZNF93P35789 620 aaPredicted RBP13.32□□□□□ -0.28
ERBB2-222ENST00000584908 TGFBR2P37173 567 aa13.32□□□□□ -0.28
ERBB2-222ENST00000584908 PTGFRP43088 359 aa13.32□□□□□ -0.28
ERBB2-222ENST00000584908 DLX6P56179 175 aa13.32□□□□□ -0.28
ERBB2-222ENST00000584908 GUCA2AQ02747 115 aa13.32□□□□□ -0.28
ERBB2-222ENST00000584908 MEF2CQ06413 473 aaPredicted RBP13.32□□□□□ -0.28
ERBB2-222ENST00000584908 BLMHQ13867 455 aa13.32□□□□□ -0.28
ERBB2-222ENST00000584908 DDI2Q5TDH0 399 aa13.32□□□□□ -0.28
ERBB2-222ENST00000584908 RUSC1-AS1Q66K80 236 aa13.32□□□□□ -0.28
ERBB2-222ENST00000584908 NCR3LG1Q68D85 454 aa13.32□□□□□ -0.28
ERBB2-222ENST00000584908 Q6P435 159 aa13.32□□□□□ -0.28
ERBB2-222ENST00000584908 CDH26Q8IXH8 852 aa13.32□□□□□ -0.28
ERBB2-222ENST00000584908 CHST4Q8NCG5 386 aa13.32□□□□□ -0.28
ERBB2-222ENST00000584908 TNFAIP8L1Q8WVP5 186 aa13.32□□□□□ -0.28
ERBB2-222ENST00000584908 GPER1Q99527 375 aa13.32□□□□□ -0.28
ERBB2-222ENST00000584908 EXOSC4Q9NPD3 245 aaKnown RBP13.32□□□□□ -0.28
ERBB2-222ENST00000584908 SIRT7Q9NRC8 400 aa13.32□□□□□ -0.28
ERBB2-222ENST00000584908 BLOC1S6Q9UL45 172 aa13.32□□□□□ -0.28
ERBB2-222ENST00000584908 GSTK1Q9Y2Q3 226 aa13.32□□□□□ -0.28
ERBB2-222ENST00000584908 MGST3O14880 152 aa13.31□□□□□ -0.28
ERBB2-222ENST00000584908 PIN1P1O15428 100 aa13.31□□□□□ -0.28
ERBB2-222ENST00000584908 OR2H2O95918 312 aa13.31□□□□□ -0.28
ERBB2-222ENST00000584908 RBP4P02753 201 aa13.31□□□□□ -0.28
ERBB2-222ENST00000584908 CALCBP10092 127 aa13.31□□□□□ -0.28
ERBB2-222ENST00000584908 ERP29P30040 261 aaKnown RBP13.31□□□□□ -0.28
ERBB2-222ENST00000584908 OR3A1P47881 315 aa13.31□□□□□ -0.28
ERBB2-222ENST00000584908 UBE2E1P51965 193 aa13.31□□□□□ -0.28
ERBB2-222ENST00000584908 UBA52P62987 128 aaKnown RBP13.31□□□□□ -0.28
ERBB2-222ENST00000584908 TPBGQ13641 420 aa13.31□□□□□ -0.28
ERBB2-222ENST00000584908 ZNF273Q14593 569 aa13.31□□□□□ -0.28
ERBB2-222ENST00000584908 MED22Q15528 200 aa13.31□□□□□ -0.28
ERBB2-222ENST00000584908 DEFB112Q30KQ8 113 aa13.31□□□□□ -0.28
ERBB2-222ENST00000584908 NHLRC3Q5JS37 347 aa13.31□□□□□ -0.28
ERBB2-222ENST00000584908 GDPD3Q7L5L3 318 aa13.31□□□□□ -0.28
ERBB2-222ENST00000584908 SATL1Q86VE3 508 aa13.31□□□□□ -0.28
ERBB2-222ENST00000584908 LYPD6Q86Y78 171 aa13.31□□□□□ -0.28
ERBB2-222ENST00000584908 PIP4P2Q8N4L2 257 aa13.31□□□□□ -0.28
ERBB2-222ENST00000584908 OR4M1Q8NGD0 313 aa13.31□□□□□ -0.28
ERBB2-222ENST00000584908 PPP1R35Q8TAP8 253 aa13.31□□□□□ -0.28
ERBB2-222ENST00000584908 NOX4Q9NPH5 578 aa13.31□□□□□ -0.28
ERBB2-222ENST00000584908 A0A0G2JK05 382 aa13.3□□□□□ -0.28
ERBB2-222ENST00000584908 MAGEA13PA6NCF6 341 aa13.3□□□□□ -0.28
ERBB2-222ENST00000584908 DNAJC9-AS1A6NH13 148 aa13.3□□□□□ -0.28
ERBB2-222ENST00000584908 C17orf98A8MV24 154 aa13.3□□□□□ -0.28
ERBB2-222ENST00000584908 CSN2P05814 226 aa13.3□□□□□ -0.28
ERBB2-222ENST00000584908 GABRR1P24046 479 aa13.3□□□□□ -0.28
ERBB2-222ENST00000584908 OR3A4PP47883 348 aa13.3□□□□□ -0.28
ERBB2-222ENST00000584908 IL13RA2Q14627 380 aa13.3□□□□□ -0.28
ERBB2-222ENST00000584908 GRK1Q15835 563 aa13.3□□□□□ -0.28
ERBB2-222ENST00000584908 HCP5Q6MZN7 132 aa13.3□□□□□ -0.28
ERBB2-222ENST00000584908 OR4S1Q8NGB4 309 aa13.3□□□□□ -0.28
ERBB2-222ENST00000584908 KIAA2026Q5HYC2 2103 aa13.29□□□□□ -0.28
ERBB2-222ENST00000584908 hCG_1809904A0A1W2PP81 198 aa13.29□□□□□ -0.28
ERBB2-222ENST00000584908 A0A1W2PPE2 198 aa13.29□□□□□ -0.28
ERBB2-222ENST00000584908 A0A1W2PR64 198 aa13.29□□□□□ -0.28
ERBB2-222ENST00000584908 A0A1W2PRV1 198 aa13.29□□□□□ -0.28
ERBB2-222ENST00000584908 SLC33A1O00400 549 aaPredicted RBP13.29□□□□□ -0.28
ERBB2-222ENST00000584908 MRPS14O60783 128 aaKnown RBP13.29□□□□□ -0.28
ERBB2-222ENST00000584908 CCL3L1P16619 93 aa13.29□□□□□ -0.28
ERBB2-222ENST00000584908 GP2P55259 537 aaKnown RBP13.29□□□□□ -0.28
ERBB2-222ENST00000584908 SNU13P55769 128 aaKnown RBP13.29□□□□□ -0.28
ERBB2-222ENST00000584908 EDDM3BP56851 147 aa13.29□□□□□ -0.28
ERBB2-222ENST00000584908 GABARAPL2P60520 117 aa13.29□□□□□ -0.28
ERBB2-222ENST00000584908 MLLT11Q13015 90 aaPredicted RBP13.29□□□□□ -0.28
ERBB2-222ENST00000584908 BAMBIQ13145 260 aa13.29□□□□□ -0.28
ERBB2-222ENST00000584908 RSU1Q15404 277 aa13.29□□□□□ -0.28
ERBB2-222ENST00000584908 TBCEQ15813 527 aaPredicted RBP13.29□□□□□ -0.28
ERBB2-222ENST00000584908 ACSM3Q53FZ2 586 aa13.29□□□□□ -0.28
ERBB2-222ENST00000584908 Q6YL49 198 aa13.29□□□□□ -0.28
ERBB2-222ENST00000584908 TCF23Q7RTU1 214 aa13.29□□□□□ -0.28
ERBB2-222ENST00000584908 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.29□□□□□ -0.28
ERBB2-222ENST00000584908 CHST6Q9GZX3 395 aa13.29□□□□□ -0.28
ERBB2-222ENST00000584908 Q9H521 79 aa13.29□□□□□ -0.28
ERBB2-222ENST00000584908 IFT22Q9H7X7 185 aa13.29□□□□□ -0.28
ERBB2-222ENST00000584908 LINC00312Q9Y6C7 94 aa13.29□□□□□ -0.28
ERBB2-222ENST00000584908 MDFIC2A0A1B0GVS7 189 aa13.28□□□□□ -0.28
ERBB2-222ENST00000584908 A0A1W2PPK0 400 aa13.28□□□□□ -0.28
ERBB2-222ENST00000584908 hADV38S2A0JD32 116 aa13.28□□□□□ -0.28
ERBB2-222ENST00000584908 SIRPB1O00241 398 aa13.28□□□□□ -0.28
ERBB2-222ENST00000584908 ZNF780AO75290 641 aaPredicted RBP13.28□□□□□ -0.28
ERBB2-222ENST00000584908 RNASE1P07998 156 aaKnown RBP13.28□□□□□ -0.28
ERBB2-222ENST00000584908 ZNF728P0DKX0 622 aa13.28□□□□□ -0.28
ERBB2-222ENST00000584908 DLX1P56177 255 aa13.28□□□□□ -0.28
ERBB2-222ENST00000584908 P2RX3P56373 397 aa13.28□□□□□ -0.28
ERBB2-222ENST00000584908 PAX5Q02548 391 aa13.28□□□□□ -0.28
ERBB2-222ENST00000584908 KLRD1Q13241 179 aa13.28□□□□□ -0.28
ERBB2-222ENST00000584908 SLC9A3R2Q15599 337 aa13.28□□□□□ -0.28
ERBB2-222ENST00000584908 LIPKQ5VXJ0 399 aa13.28□□□□□ -0.28
ERBB2-222ENST00000584908 LDLRAD3Q86YD5 345 aa13.28□□□□□ -0.28
ERBB2-222ENST00000584908 TMEM86BQ8N661 226 aa13.28□□□□□ -0.28
ERBB2-222ENST00000584908 NKAIN3Q8N8D7 197 aa13.28□□□□□ -0.28
ERBB2-222ENST00000584908 PHYHIPQ92561 330 aa13.28□□□□□ -0.28
ERBB2-222ENST00000584908 UFD1Q92890 307 aa13.28□□□□□ -0.28
ERBB2-222ENST00000584908 NKX3-1Q99801 234 aaPredicted RBP13.28□□□□□ -0.28
ERBB2-222ENST00000584908 CCDC90BQ9GZT6 254 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms