RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 VDAC2P45880 294 aaPredicted RBP16.44■□□□□ 0.22
TOP3A-219ENST00000584887 SCN1BQ07699 218 aa16.44■□□□□ 0.22
TOP3A-219ENST00000584887 PDZK1IP1Q13113 114 aa16.44■□□□□ 0.22
TOP3A-219ENST00000584887 BEAN1Q3B7T3 259 aa16.44■□□□□ 0.22
TOP3A-219ENST00000584887 TMEM95Q3KNT9 176 aa16.44■□□□□ 0.22
TOP3A-219ENST00000584887 OR13C9Q8NGT0 318 aa16.44■□□□□ 0.22
TOP3A-219ENST00000584887 TRUB1Q8WWH5 349 aaKnown RBP16.44■□□□□ 0.22
TOP3A-219ENST00000584887 SPSB1Q96BD6 273 aa16.44■□□□□ 0.22
TOP3A-219ENST00000584887 SEBOXQ9HB31 216 aaPredicted RBP16.44■□□□□ 0.22
TOP3A-219ENST00000584887 HMG20AQ9NP66 347 aa16.44■□□□□ 0.22
TOP3A-219ENST00000584887 PCDHGB5Q9Y5G0 923 aa16.44■□□□□ 0.22
TOP3A-219ENST00000584887 TRGV10A0A0A0MS01 117 aa16.43■□□□□ 0.22
TOP3A-219ENST00000584887 OR2H2O95918 312 aa16.43■□□□□ 0.22
TOP3A-219ENST00000584887 HTR1DP28221 377 aa16.43■□□□□ 0.22
TOP3A-219ENST00000584887 DYNLT3P51808 116 aa16.43■□□□□ 0.22
TOP3A-219ENST00000584887 BLCAPP62952 87 aa16.43■□□□□ 0.22
TOP3A-219ENST00000584887 ZNF146Q15072 292 aa16.43■□□□□ 0.22
TOP3A-219ENST00000584887 Q6ZS46 218 aa16.43■□□□□ 0.22
TOP3A-219ENST00000584887 ZBTB49Q6ZSB9 765 aa16.43■□□□□ 0.22
TOP3A-219ENST00000584887 KCTD20Q7Z5Y7 419 aa16.43■□□□□ 0.22
TOP3A-219ENST00000584887 OR51A4Q8NGJ6 313 aa16.43■□□□□ 0.22
TOP3A-219ENST00000584887 R3HDM4Q96D70 268 aa16.43■□□□□ 0.22
TOP3A-219ENST00000584887 C4orf36Q96KX1 117 aa16.43■□□□□ 0.22
TOP3A-219ENST00000584887 MBOAT4Q96T53 435 aa16.43■□□□□ 0.22
TOP3A-219ENST00000584887 CITED2Q99967 270 aaPredicted RBP16.43■□□□□ 0.22
TOP3A-219ENST00000584887 UBE2J1Q9Y385 318 aaPredicted RBP16.43■□□□□ 0.22
TOP3A-219ENST00000584887 IGKV1-12A0A0C4DH73 117 aa16.42■□□□□ 0.22
TOP3A-219ENST00000584887 IGKV1D-12P01611 117 aa16.42■□□□□ 0.22
TOP3A-219ENST00000584887 ALDOBP05062 364 aa16.42■□□□□ 0.22
TOP3A-219ENST00000584887 ISG15P05161 165 aa16.42■□□□□ 0.22
TOP3A-219ENST00000584887 ALPLP05186 524 aa16.42■□□□□ 0.22
TOP3A-219ENST00000584887 ZNF44P15621 663 aa16.42■□□□□ 0.22
TOP3A-219ENST00000584887 CDK2P24941 298 aa16.42■□□□□ 0.22
TOP3A-219ENST00000584887 EMX1Q04741 257 aaPredicted RBP16.42■□□□□ 0.22
TOP3A-219ENST00000584887 IL18R1Q13478 541 aa16.42■□□□□ 0.22
TOP3A-219ENST00000584887 SAMD5Q5TGI4 173 aa16.42■□□□□ 0.22
TOP3A-219ENST00000584887 FDX2Q6P4F2 183 aa16.42■□□□□ 0.22
TOP3A-219ENST00000584887 BAIAP2L2Q6UXY1 529 aa16.42■□□□□ 0.22
TOP3A-219ENST00000584887 RNF144BQ7Z419 303 aa16.42■□□□□ 0.22
TOP3A-219ENST00000584887 NDUFA11Q86Y39 141 aa16.42■□□□□ 0.22
TOP3A-219ENST00000584887 ACBD7Q8N6N7 88 aa16.42■□□□□ 0.22
TOP3A-219ENST00000584887 CAPSLQ8WWF8 208 aa16.42■□□□□ 0.22
TOP3A-219ENST00000584887 PELI1Q96FA3 418 aa16.42■□□□□ 0.22
TOP3A-219ENST00000584887 HRASLS5Q96KN8 279 aa16.42■□□□□ 0.22
TOP3A-219ENST00000584887 MMP28Q9H239 520 aa16.42■□□□□ 0.22
TOP3A-219ENST00000584887 GAL3ST2Q9H3Q3 398 aa16.42■□□□□ 0.22
TOP3A-219ENST00000584887 AASSQ9UDR5 926 aa16.42■□□□□ 0.22
TOP3A-219ENST00000584887 A0A1W2PRX2 142 aa16.41■□□□□ 0.22
TOP3A-219ENST00000584887 H3BUI4 141 aa16.41■□□□□ 0.22
TOP3A-219ENST00000584887 ERP29P30040 261 aaKnown RBP16.41■□□□□ 0.22
TOP3A-219ENST00000584887 GLIPR1P48060 266 aa16.41■□□□□ 0.22
TOP3A-219ENST00000584887 SNRPGP62308 76 aaKnown RBP16.41■□□□□ 0.22
TOP3A-219ENST00000584887 MEDAGQ5VYS4 303 aa16.41■□□□□ 0.22
TOP3A-219ENST00000584887 ABHD12Q8N2K0 398 aa16.41■□□□□ 0.22
TOP3A-219ENST00000584887 OR4P4Q8NGL7 312 aa16.41■□□□□ 0.22
TOP3A-219ENST00000584887 MRPL48Q96GC5 212 aaKnown RBP16.41■□□□□ 0.22
TOP3A-219ENST00000584887 PRKDCP78527 4128 aaKnown RBP16.41■□□□□ 0.22
TOP3A-219ENST00000584887 FUOMA2VDF0 154 aa16.4■□□□□ 0.22
TOP3A-219ENST00000584887 SNTNA6NMZ2 147 aa16.4■□□□□ 0.22
TOP3A-219ENST00000584887 OR4C45A6NMZ5 311 aa16.4■□□□□ 0.22
TOP3A-219ENST00000584887 J3QRE1 110 aa16.4■□□□□ 0.22
TOP3A-219ENST00000584887 XPNPEP2O43895 674 aa16.4■□□□□ 0.22
TOP3A-219ENST00000584887 KDM4BO94953 1096 aa16.4■□□□□ 0.22
TOP3A-219ENST00000584887 HCKP08631 526 aa16.4■□□□□ 0.22
TOP3A-219ENST00000584887 CD24P25063 80 aa16.4■□□□□ 0.22
TOP3A-219ENST00000584887 CCR9P51686 369 aa16.4■□□□□ 0.22
TOP3A-219ENST00000584887 AESQ08117 197 aa16.4■□□□□ 0.22
TOP3A-219ENST00000584887 ALKBH1Q13686 389 aaKnown RBP16.4■□□□□ 0.22
TOP3A-219ENST00000584887 KPNB1Q14974 876 aaKnown RBP16.4■□□□□ 0.22
TOP3A-219ENST00000584887 OR52W1Q6IF63 320 aa16.4■□□□□ 0.22
TOP3A-219ENST00000584887 LHFPL3Q86UP9 236 aa16.4■□□□□ 0.22
TOP3A-219ENST00000584887 OR4F17Q8NGA8 305 aa16.4■□□□□ 0.22
TOP3A-219ENST00000584887 LGALS12Q96DT0 336 aa16.4■□□□□ 0.22
TOP3A-219ENST00000584887 OR4F4Q96R69 305 aa16.4■□□□□ 0.22
TOP3A-219ENST00000584887 ALG8Q9BVK2 526 aa16.4■□□□□ 0.22
TOP3A-219ENST00000584887 DPM3Q9P2X0 92 aa16.4■□□□□ 0.22
TOP3A-219ENST00000584887 TMEM225BP0DP42 221 aa16.39■□□□□ 0.21
TOP3A-219ENST00000584887 ALDH3A2P51648 485 aa16.39■□□□□ 0.21
TOP3A-219ENST00000584887 OXLD1Q5BKU9 147 aa16.39■□□□□ 0.21
TOP3A-219ENST00000584887 SLC25A30Q5SVS4 291 aa16.39■□□□□ 0.21
TOP3A-219ENST00000584887 LPCAT4Q643R3 524 aa16.39■□□□□ 0.21
TOP3A-219ENST00000584887 CBR4Q8N4T8 237 aa16.39■□□□□ 0.21
TOP3A-219ENST00000584887 ZNF596Q8TC21 504 aa16.39■□□□□ 0.21
TOP3A-219ENST00000584887 STMN2Q93045 179 aa16.39■□□□□ 0.21
TOP3A-219ENST00000584887 WNT10AQ9GZT5 417 aa16.39■□□□□ 0.21
TOP3A-219ENST00000584887 COMMD4Q9H0A8 199 aa16.39■□□□□ 0.21
TOP3A-219ENST00000584887 ZCCHC4Q9H5U6 513 aa16.39■□□□□ 0.21
TOP3A-219ENST00000584887 GMPPBQ9Y5P6 360 aa16.39■□□□□ 0.21
TOP3A-219ENST00000584887 ODAMA1E959 279 aa16.38■□□□□ 0.21
TOP3A-219ENST00000584887 FAM90A22PA8MWA6 464 aa16.38■□□□□ 0.21
TOP3A-219ENST00000584887 BRS3P32247 399 aa16.38■□□□□ 0.21
TOP3A-219ENST00000584887 GDNFP39905 211 aa16.38■□□□□ 0.21
TOP3A-219ENST00000584887 PTGFRP43088 359 aa16.38■□□□□ 0.21
TOP3A-219ENST00000584887 ARHGDIBP52566 201 aa16.38■□□□□ 0.21
TOP3A-219ENST00000584887 RBM39Q14498 530 aaKnown RBP16.38■□□□□ 0.21
TOP3A-219ENST00000584887 ATXN7L3Q14CW9 347 aaPredicted RBP16.38■□□□□ 0.21
TOP3A-219ENST00000584887 KRBOX4Q5JUW0 171 aa16.38■□□□□ 0.21
TOP3A-219ENST00000584887 KPRPQ5T749 579 aaPredicted RBP16.38■□□□□ 0.21
TOP3A-219ENST00000584887 HEPN1Q6WQI6 88 aa16.38■□□□□ 0.21
TOP3A-219ENST00000584887 RTN4RL2Q86UN3 420 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms