RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 PROB1E7EW31 1015 aa8.83□□□□□ -1
RFFL-212ENST00000584655 TUSC2O75896 110 aa8.83□□□□□ -1
RFFL-212ENST00000584655 NAT2P11245 290 aa8.83□□□□□ -1
RFFL-212ENST00000584655 ALDH3B1P43353 468 aa8.83□□□□□ -1
RFFL-212ENST00000584655 LUMP51884 338 aaPredicted RBP8.83□□□□□ -1
RFFL-212ENST00000584655 AESQ08117 197 aa8.83□□□□□ -1
RFFL-212ENST00000584655 RBM39Q14498 530 aaKnown RBP8.83□□□□□ -1
RFFL-212ENST00000584655 MEF2DQ14814 521 aa8.83□□□□□ -1
RFFL-212ENST00000584655 JMJD6Q6NYC1 403 aaPredicted RBP8.83□□□□□ -1
RFFL-212ENST00000584655 BTNL3Q6UXE8 466 aa8.83□□□□□ -1
RFFL-212ENST00000584655 PHYHIPQ92561 330 aa8.83□□□□□ -1
RFFL-212ENST00000584655 HINT2Q9BX68 163 aa8.83□□□□□ -1
RFFL-212ENST00000584655 MBD2Q9UBB5 411 aa8.83□□□□□ -1
RFFL-212ENST00000584655 OR2F2O95006 317 aa8.83□□□□□ -1
RFFL-212ENST00000584655 CEACAM1P13688 526 aa8.83□□□□□ -1
RFFL-212ENST00000584655 GALP22466 123 aa8.83□□□□□ -1
RFFL-212ENST00000584655 PAX6P26367 422 aa8.83□□□□□ -1
RFFL-212ENST00000584655 GLP1RP43220 463 aa8.83□□□□□ -1
RFFL-212ENST00000584655 CLPPQ16740 277 aaPredicted RBP8.83□□□□□ -1
RFFL-212ENST00000584655 IGFBPL1Q8WX77 278 aa8.83□□□□□ -1
RFFL-212ENST00000584655 SCMH1Q96GD3 660 aa8.83□□□□□ -1
RFFL-212ENST00000584655 KIRREL1Q96J84 757 aa8.83□□□□□ -1
RFFL-212ENST00000584655 VRK1Q99986 396 aaPredicted RBP8.83□□□□□ -1
RFFL-212ENST00000584655 SF3B5Q9BWJ5 86 aaKnown RBP8.83□□□□□ -1
RFFL-212ENST00000584655 TMEM231Q9H6L2 316 aa8.83□□□□□ -1
RFFL-212ENST00000584655 SLC17A5Q9NRA2 495 aa8.83□□□□□ -1
RFFL-212ENST00000584655 MTCH1Q9NZJ7 389 aa8.83□□□□□ -1
RFFL-212ENST00000584655 C14orf166Q9Y224 244 aaKnown RBP8.83□□□□□ -1
RFFL-212ENST00000584655 LYNX1G3V0Z9 82 aa8.83□□□□□ -1
RFFL-212ENST00000584655 CST2P09228 141 aa8.83□□□□□ -1
RFFL-212ENST00000584655 LYNX1P0DP58 116 aa8.83□□□□□ -1
RFFL-212ENST00000584655 PIGPP57054 158 aa8.83□□□□□ -1
RFFL-212ENST00000584655 OPCMLQ14982 345 aa8.83□□□□□ -1
RFFL-212ENST00000584655 HACD4Q5VWC8 232 aa8.83□□□□□ -1
RFFL-212ENST00000584655 GLDNQ6ZMI3 551 aaPredicted RBP8.83□□□□□ -1
RFFL-212ENST00000584655 C9orf62Q8N4C0 152 aa8.83□□□□□ -1
RFFL-212ENST00000584655 SLC5A7Q9GZV3 580 aa8.83□□□□□ -1
RFFL-212ENST00000584655 A0A1W2PRD5 423 aa8.82□□□□□ -1
RFFL-212ENST00000584655 A0A1W2PRF3 423 aa8.82□□□□□ -1
RFFL-212ENST00000584655 A0A1W2PRM7 423 aa8.82□□□□□ -1
RFFL-212ENST00000584655 BPNT1O95861 308 aa8.82□□□□□ -1
RFFL-212ENST00000584655 CLINT1Q14677 625 aa8.82□□□□□ -1
RFFL-212ENST00000584655 LAMTOR1Q6IAA8 161 aa8.82□□□□□ -1
RFFL-212ENST00000584655 PEG10Q86TG7 708 aaKnown RBP8.82□□□□□ -1
RFFL-212ENST00000584655 ZNF565Q8N9K5 539 aa8.82□□□□□ -1
RFFL-212ENST00000584655 OR13G1Q8NGZ3 307 aa8.82□□□□□ -1
RFFL-212ENST00000584655 PRR7Q8TB68 274 aa8.82□□□□□ -1
RFFL-212ENST00000584655 FOXRED1Q96CU9 486 aaPredicted RBP8.82□□□□□ -1
RFFL-212ENST00000584655 MUCL1Q96DR8 90 aa8.82□□□□□ -1
RFFL-212ENST00000584655 MEIKINA0A087WXM9 373 aa8.82□□□□□ -1
RFFL-212ENST00000584655 DEGS1O15121 323 aa8.82□□□□□ -1
RFFL-212ENST00000584655 ONECUT2O95948 504 aa8.82□□□□□ -1
RFFL-212ENST00000584655 M6PRP20645 277 aa8.82□□□□□ -1
RFFL-212ENST00000584655 MPGP29372 298 aa8.82□□□□□ -1
RFFL-212ENST00000584655 KIR2DL2P43627 348 aaPredicted RBP8.82□□□□□ -1
RFFL-212ENST00000584655 HIST3H3Q16695 136 aa8.82□□□□□ -1
RFFL-212ENST00000584655 SPRNQ5BIV9 151 aa8.82□□□□□ -1
RFFL-212ENST00000584655 C10orf128Q5T292 105 aa8.82□□□□□ -1
RFFL-212ENST00000584655 IQCF2Q8IXL9 164 aa8.82□□□□□ -1
RFFL-212ENST00000584655 FGFRL1Q8N441 504 aa8.82□□□□□ -1
RFFL-212ENST00000584655 LINC01560Q8TB33 94 aa8.82□□□□□ -1
RFFL-212ENST00000584655 MRGPRDQ8TDS7 321 aa8.82□□□□□ -1
RFFL-212ENST00000584655 ZNF391Q9UJN7 358 aa8.82□□□□□ -1
RFFL-212ENST00000584655 UBE2J1Q9Y385 318 aaPredicted RBP8.82□□□□□ -1
RFFL-212ENST00000584655 ITPR1Q14643 2758 aa8.82□□□□□ -1
RFFL-212ENST00000584655 OPN1MWP04001 364 aa8.82□□□□□ -1
RFFL-212ENST00000584655 OPN1MW2P0DN77 364 aa8.82□□□□□ -1
RFFL-212ENST00000584655 OPN1MW3P0DN78 364 aa8.82□□□□□ -1
RFFL-212ENST00000584655 CAV2P51636 162 aa8.82□□□□□ -1
RFFL-212ENST00000584655 RPS27AP62979 156 aaKnown RBP8.82□□□□□ -1
RFFL-212ENST00000584655 ABLIM2Q6H8Q1 611 aa8.82□□□□□ -1
RFFL-212ENST00000584655 C11orf87Q6NUJ2 197 aa8.82□□□□□ -1
RFFL-212ENST00000584655 TCTE3Q8IZS6 198 aa8.82□□□□□ -1
RFFL-212ENST00000584655 ZSCAN4Q8NAM6 433 aaPredicted RBP8.82□□□□□ -1
RFFL-212ENST00000584655 HPSE2Q8WWQ2 592 aa8.82□□□□□ -1
RFFL-212ENST00000584655 NEUROG1Q92886 237 aa8.82□□□□□ -1
RFFL-212ENST00000584655 APOBEC3DQ96AK3 386 aaPredicted RBP8.82□□□□□ -1
RFFL-212ENST00000584655 RABL2BQ9UNT1 228 aa8.82□□□□□ -1
RFFL-212ENST00000584655 RFNGQ9Y644 331 aa8.82□□□□□ -1
RFFL-212ENST00000584655 PLSCR5A0PG75 271 aa8.81□□□□□ -1
RFFL-212ENST00000584655 CDRT15L2A8MXV6 281 aa8.81□□□□□ -1
RFFL-212ENST00000584655 MCRIP1C9JLW8 97 aa8.81□□□□□ -1
RFFL-212ENST00000584655 APOC1P02654 83 aa8.81□□□□□ -1
RFFL-212ENST00000584655 ISG15P05161 165 aa8.81□□□□□ -1
RFFL-212ENST00000584655 MMP7P09237 267 aaPredicted RBP8.81□□□□□ -1
RFFL-212ENST00000584655 PSG7Q13046 419 aa8.81□□□□□ -1
RFFL-212ENST00000584655 IAH1Q2TAA2 248 aaPredicted RBP8.81□□□□□ -1
RFFL-212ENST00000584655 H3F3CQ6NXT2 135 aa8.81□□□□□ -1
RFFL-212ENST00000584655 SNRNP40Q96DI7 357 aaKnown RBP8.81□□□□□ -1
RFFL-212ENST00000584655 CXorf58Q96LI9 332 aa8.81□□□□□ -1
RFFL-212ENST00000584655 DHRS9Q9BPW9 319 aa8.81□□□□□ -1
RFFL-212ENST00000584655 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.81□□□□□ -1
RFFL-212ENST00000584655 TAS2R3Q9NYW6 316 aa8.81□□□□□ -1
RFFL-212ENST00000584655 NSG2Q9Y328 171 aa8.81□□□□□ -1
RFFL-212ENST00000584655 CECR9P0C854 216 aa8.81□□□□□ -1
RFFL-212ENST00000584655 CXCL2P19875 107 aa8.81□□□□□ -1
RFFL-212ENST00000584655 DYRK1AQ13627 763 aa8.81□□□□□ -1
RFFL-212ENST00000584655 TMEM88Q6PEY1 159 aa8.81□□□□□ -1
RFFL-212ENST00000584655 OR1K1Q8NGR3 316 aa8.81□□□□□ -1
RFFL-212ENST00000584655 PP6455Q8WZ26 134 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms