RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-223ENST00000583877 FEVQ99581 238 aa6.9□□□□□ -1.3
NUP85-223ENST00000583877 ASCL2Q99929 193 aa6.9□□□□□ -1.3
NUP85-223ENST00000583877 ELAC2Q9BQ52 826 aaKnown RBP6.9□□□□□ -1.3
NUP85-223ENST00000583877 MAGIXQ9H6Y5 334 aa6.9□□□□□ -1.3
NUP85-223ENST00000583877 MOB1AQ9H8S9 216 aa6.9□□□□□ -1.3
NUP85-223ENST00000583877 GFOD1Q9NXC2 390 aa6.9□□□□□ -1.3
NUP85-223ENST00000583877 PRR13Q9NZ81 148 aa6.9□□□□□ -1.3
NUP85-223ENST00000583877 SLC7A11Q9UPY5 501 aa6.9□□□□□ -1.3
NUP85-223ENST00000583877 MOB4Q9Y3A3 225 aa6.9□□□□□ -1.3
NUP85-223ENST00000583877 HSPE1-MOB4S4R3N1 261 aa6.9□□□□□ -1.3
NUP85-223ENST00000583877 TNCP24821 2201 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 FAM172BPA6NC97 362 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 ARRDC5A6NEK1 342 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 OOSP1A8MZH6 123 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 PRR32B1ATL7 298 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 LY6LH3BQJ8 138 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 BUB1B-PAK6H3BSN5 160 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 TOR1AO14656 332 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 MGST3O14880 152 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 PSPNO60542 156 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 SRSF10O75494 262 aaKnown RBP6.89□□□□□ -1.31
NUP85-223ENST00000583877 HAND1O96004 215 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 IGHA1P01876 353 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 HMGN1P05114 100 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 MRPL3P09001 348 aaKnown RBP6.89□□□□□ -1.31
NUP85-223ENST00000583877 FAM106CPP0CH98 169 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 CD34P28906 385 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 ERP29P30040 261 aaKnown RBP6.89□□□□□ -1.31
NUP85-223ENST00000583877 MNDAP41218 407 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 GTF2A1P52655 376 aaPredicted RBP6.89□□□□□ -1.31
NUP85-223ENST00000583877 MFGE8Q08431 387 aaPredicted RBP6.89□□□□□ -1.31
NUP85-223ENST00000583877 GK3PQ14409 553 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 GINS1Q14691 196 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 HLA-DRB5Q30154 266 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 TPTE2P1Q5T6R2 138 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 C9orf66Q5T8R8 295 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 CCDC144NLQ6NUI1 221 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 BAIAP2L2Q6UXY1 529 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 HEPN1Q6WQI6 88 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 EGFL6Q8IUX8 553 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 ZNF695Q8IW36 515 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 Q8IYB0 196 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 ENTHD1Q8IYW4 607 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 Q8NFD4 153 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 BBS1Q8NFJ9 593 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 OR14K1Q8NGZ2 314 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 GIPC3Q8TF64 312 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 SLAMF9Q96A28 289 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 RAX2Q96IS3 184 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 Q96M66 194 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 CLUHP3Q96NS8 147 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 PRR25Q96S07 402 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 SSBP4Q9BWG4 385 aaPredicted RBP6.89□□□□□ -1.31
NUP85-223ENST00000583877 TEX12Q9BXU0 123 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 CADM1Q9BY67 442 aaKnown RBP6.89□□□□□ -1.31
NUP85-223ENST00000583877 CHST6Q9GZX3 395 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 GAL3ST2Q9H3Q3 398 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 ACTR3BQ9P1U1 418 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 GLS2Q9UI32 602 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 TMEM14AQ9Y6G1 99 aa6.89□□□□□ -1.31
NUP85-223ENST00000583877 PLECQ15149 4684 aaKnown RBP6.89□□□□□ -1.31
NUP85-223ENST00000583877 TRGV10A0A0A0MS01 117 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 LCE6AA0A183 80 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 A0A1B0GTI1 187 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 TCRBV5S2A0A599 114 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 FAM90A18PA6NE21 464 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 FAM90A16PA6NEW6 464 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 FAM90A20PA6NIJ5 464 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 FAM90A9PA6NNJ1 464 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 FAM90A12PA8MX19 464 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 FAM90A5PA8MXJ8 464 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 LOC110117498-PIK3R3F6TDL0 507 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 H3BSH0 61 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 CCL24O00175 119 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 GNGT2O14610 69 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 FAM90A15PP0C7V4 464 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 FAM90A13PP0C7W8 464 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 FAM90A14PP0C7W9 464 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 FAM90A24PP0C7X0 464 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 ATP6V1B2P21281 511 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 CDK2P24941 298 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 ADMP35318 185 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 ECI1P42126 302 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 OR3A1P47881 315 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 LUMP51884 338 aaPredicted RBP6.88□□□□□ -1.31
NUP85-223ENST00000583877 PRRX1P54821 245 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 SNU13P55769 128 aaKnown RBP6.88□□□□□ -1.31
NUP85-223ENST00000583877 P2RX3P56373 397 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 ACTR3P61158 418 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 SUMO1P63165 101 aaKnown RBP6.88□□□□□ -1.31
NUP85-223ENST00000583877 SLC35B1P78383 322 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 CDK5Q00535 292 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 ZNF91Q05481 1191 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 APOFQ13790 326 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 HES1Q14469 280 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 RBM39Q14498 530 aaKnown RBP6.88□□□□□ -1.31
NUP85-223ENST00000583877 ZNF146Q15072 292 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 TM4SF20Q53R12 229 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 BCL2L15Q5TBC7 163 aa6.88□□□□□ -1.31
NUP85-223ENST00000583877 PRAMEF5Q5TYX0 476 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms