RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	KDM4D	Q6B0I6	523 aa		12.1	□□□□□ -0.47
SREBF1-222	ENST00000583732	AMIGO2	Q86SJ2	522 aa		12.1	□□□□□ -0.47
SREBF1-222	ENST00000583732	CCDC54	Q8NEL0	328 aa		12.1	□□□□□ -0.47
SREBF1-222	ENST00000583732	PP6455	Q8WZ26	134 aa		12.1	□□□□□ -0.47
SREBF1-222	ENST00000583732	MYDGF	Q969H8	173 aa		12.1	□□□□□ -0.47
SREBF1-222	ENST00000583732	SPACA5	Q96QH8	159 aa		12.1	□□□□□ -0.47
SREBF1-222	ENST00000583732	CIB1	Q99828	191 aa		12.1	□□□□□ -0.47
SREBF1-222	ENST00000583732	GABARAPL1	Q9H0R8	117 aa		12.1	□□□□□ -0.47
SREBF1-222	ENST00000583732	GAL3ST2	Q9H3Q3	398 aa		12.1	□□□□□ -0.47
SREBF1-222	ENST00000583732	RIBC2	Q9H4K1	309 aa		12.1	□□□□□ -0.47
SREBF1-222	ENST00000583732	DPM3	Q9P2X0	92 aa		12.1	□□□□□ -0.47
SREBF1-222	ENST00000583732	GLS2	Q9UI32	602 aa		12.1	□□□□□ -0.47
SREBF1-222	ENST00000583732	UBE2J1	Q9Y385	318 aa	Predicted RBP	12.1	□□□□□ -0.47
SREBF1-222	ENST00000583732	TRGV10	A0A0A0MS01	117 aa		12.09	□□□□□ -0.47
SREBF1-222	ENST00000583732		K7EIL1	84 aa		12.09	□□□□□ -0.47
SREBF1-222	ENST00000583732	SULT1C4	O75897	302 aa		12.09	□□□□□ -0.47
SREBF1-222	ENST00000583732	OR2H2	O95918	312 aa		12.09	□□□□□ -0.47
SREBF1-222	ENST00000583732	OCM2	P0CE71	109 aa		12.09	□□□□□ -0.47
SREBF1-222	ENST00000583732	OCM	P0CE72	109 aa	Predicted RBP	12.09	□□□□□ -0.47
SREBF1-222	ENST00000583732	ATF1	P18846	271 aa		12.09	□□□□□ -0.47
SREBF1-222	ENST00000583732	BRS3	P32247	399 aa		12.09	□□□□□ -0.47
SREBF1-222	ENST00000583732	SLC35A2	P78381	396 aa		12.09	□□□□□ -0.47
SREBF1-222	ENST00000583732	ZNF85	Q03923	595 aa		12.09	□□□□□ -0.47
SREBF1-222	ENST00000583732	SCN1B	Q07699	218 aa		12.09	□□□□□ -0.47
SREBF1-222	ENST00000583732	AES	Q08117	197 aa		12.09	□□□□□ -0.47
SREBF1-222	ENST00000583732	RBM39	Q14498	530 aa	Known RBP	12.09	□□□□□ -0.47
SREBF1-222	ENST00000583732	ZNF146	Q15072	292 aa		12.09	□□□□□ -0.47
SREBF1-222	ENST00000583732	SPIN3	Q5JUX0	258 aa		12.09	□□□□□ -0.47
SREBF1-222	ENST00000583732	C16orf82	Q7Z2V1	217 aa		12.09	□□□□□ -0.47
SREBF1-222	ENST00000583732	RNF144B	Q7Z419	303 aa		12.09	□□□□□ -0.47
SREBF1-222	ENST00000583732	OR4X2	Q8NGF9	303 aa		12.09	□□□□□ -0.47
SREBF1-222	ENST00000583732	OR5D18	Q8NGL1	313 aa		12.09	□□□□□ -0.47
SREBF1-222	ENST00000583732	ZNF596	Q8TC21	504 aa		12.09	□□□□□ -0.47
SREBF1-222	ENST00000583732	FGGY	Q96C11	551 aa		12.09	□□□□□ -0.47
SREBF1-222	ENST00000583732	AKR1E2	Q96JD6	320 aa		12.09	□□□□□ -0.47
SREBF1-222	ENST00000583732	LIN7B	Q9HAP6	207 aa		12.09	□□□□□ -0.47
SREBF1-222	ENST00000583732	ZNF286A	Q9HBT8	521 aa		12.09	□□□□□ -0.47
SREBF1-222	ENST00000583732	TSSC4	Q9Y5U2	329 aa	Predicted RBP	12.09	□□□□□ -0.47
SREBF1-222	ENST00000583732	NOTCH3	Q9UM47	2321 aa		12.09	□□□□□ -0.47
SREBF1-222	ENST00000583732	IGKV1-12	A0A0C4DH73	117 aa		12.08	□□□□□ -0.48
SREBF1-222	ENST00000583732	TOR1A	O14656	332 aa		12.08	□□□□□ -0.48
SREBF1-222	ENST00000583732	IGKV1D-12	P01611	117 aa		12.08	□□□□□ -0.48
SREBF1-222	ENST00000583732	ZNF44	P15621	663 aa		12.08	□□□□□ -0.48
SREBF1-222	ENST00000583732	FAS	P25445	335 aa		12.08	□□□□□ -0.48
SREBF1-222	ENST00000583732	ERP29	P30040	261 aa	Known RBP	12.08	□□□□□ -0.48
SREBF1-222	ENST00000583732	GLIPR1	P48060	266 aa		12.08	□□□□□ -0.48
SREBF1-222	ENST00000583732	KPNB1	Q14974	876 aa	Known RBP	12.08	□□□□□ -0.48
SREBF1-222	ENST00000583732	OR52W1	Q6IF63	320 aa		12.08	□□□□□ -0.48
SREBF1-222	ENST00000583732	LHFPL2	Q6ZUX7	228 aa		12.08	□□□□□ -0.48
SREBF1-222	ENST00000583732	ZDHHC13	Q8IUH4	622 aa		12.08	□□□□□ -0.48
SREBF1-222	ENST00000583732	DNAAF1	Q8NEP3	725 aa		12.08	□□□□□ -0.48
SREBF1-222	ENST00000583732	WFDC9	Q8NEX5	89 aa		12.08	□□□□□ -0.48
SREBF1-222	ENST00000583732	EME1	Q96AY2	570 aa		12.08	□□□□□ -0.48
SREBF1-222	ENST00000583732	C10orf35	Q96D05	121 aa		12.08	□□□□□ -0.48
SREBF1-222	ENST00000583732	OPALIN	Q96PE5	141 aa		12.08	□□□□□ -0.48
SREBF1-222	ENST00000583732	SEBOX	Q9HB31	216 aa	Predicted RBP	12.08	□□□□□ -0.48
SREBF1-222	ENST00000583732	NEK6	Q9HC98	313 aa		12.08	□□□□□ -0.48
SREBF1-222	ENST00000583732	HMG20A	Q9NP66	347 aa		12.08	□□□□□ -0.48
SREBF1-222	ENST00000583732	ENOPH1	Q9UHY7	261 aa		12.08	□□□□□ -0.48
SREBF1-222	ENST00000583732	KIAA2026	Q5HYC2	2103 aa		12.08	□□□□□ -0.48
SREBF1-222	ENST00000583732	LEUTX	A8MZ59	168 aa		12.07	□□□□□ -0.48
SREBF1-222	ENST00000583732	SH2D1B	O14796	132 aa		12.07	□□□□□ -0.48
SREBF1-222	ENST00000583732	OR2F2	O95006	317 aa		12.07	□□□□□ -0.48
SREBF1-222	ENST00000583732	PRKACB	P22694	351 aa		12.07	□□□□□ -0.48
SREBF1-222	ENST00000583732	PTGFR	P43088	359 aa		12.07	□□□□□ -0.48
SREBF1-222	ENST00000583732	OR3A4P	P47883	348 aa		12.07	□□□□□ -0.48
SREBF1-222	ENST00000583732	ARHGDIB	P52566	201 aa		12.07	□□□□□ -0.48
SREBF1-222	ENST00000583732	BDH1	Q02338	343 aa		12.07	□□□□□ -0.48
SREBF1-222	ENST00000583732	PDZK1IP1	Q13113	114 aa		12.07	□□□□□ -0.48
SREBF1-222	ENST00000583732	ATXN7L3	Q14CW9	347 aa	Predicted RBP	12.07	□□□□□ -0.48
SREBF1-222	ENST00000583732	DEFB121	Q5J5C9	76 aa		12.07	□□□□□ -0.48
SREBF1-222	ENST00000583732	UTF1	Q5T230	341 aa		12.07	□□□□□ -0.48
SREBF1-222	ENST00000583732	TMEM244	Q5VVB8	128 aa		12.07	□□□□□ -0.48
SREBF1-222	ENST00000583732	C11orf87	Q6NUJ2	197 aa		12.07	□□□□□ -0.48
SREBF1-222	ENST00000583732	HEPN1	Q6WQI6	88 aa		12.07	□□□□□ -0.48
SREBF1-222	ENST00000583732	RTN4RL2	Q86UN3	420 aa		12.07	□□□□□ -0.48
SREBF1-222	ENST00000583732	OR13C9	Q8NGT0	318 aa		12.07	□□□□□ -0.48
SREBF1-222	ENST00000583732	OR2G2	Q8NGZ5	317 aa		12.07	□□□□□ -0.48
SREBF1-222	ENST00000583732	OR10AC1	Q8NH08	325 aa		12.07	□□□□□ -0.48
SREBF1-222	ENST00000583732	RNF166	Q96A37	237 aa	Predicted RBP	12.07	□□□□□ -0.48
SREBF1-222	ENST00000583732	RBM14	Q96PK6	669 aa	Known RBP	12.07	□□□□□ -0.48
SREBF1-222	ENST00000583732	WI2-2373I1.2	A0A1W2PRP0	233 aa		12.06	□□□□□ -0.48
SREBF1-222	ENST00000583732	ODAM	A1E959	279 aa		12.06	□□□□□ -0.48
SREBF1-222	ENST00000583732	FUOM	A2VDF0	154 aa		12.06	□□□□□ -0.48
SREBF1-222	ENST00000583732	IGLV1-47	P01700	117 aa		12.06	□□□□□ -0.48
SREBF1-222	ENST00000583732	NFYB	P25208	207 aa		12.06	□□□□□ -0.48
SREBF1-222	ENST00000583732	HOXD3	P31249	432 aa	Predicted RBP	12.06	□□□□□ -0.48
SREBF1-222	ENST00000583732	NANOS3	P60323	173 aa	Known RBP	12.06	□□□□□ -0.48
SREBF1-222	ENST00000583732	KRTAP10-11	P60412	298 aa		12.06	□□□□□ -0.48
SREBF1-222	ENST00000583732	CDC42	P60953	191 aa		12.06	□□□□□ -0.48
SREBF1-222	ENST00000583732	ISL1	P61371	349 aa		12.06	□□□□□ -0.48
SREBF1-222	ENST00000583732	HLA-DRB5	Q30154	266 aa		12.06	□□□□□ -0.48
SREBF1-222	ENST00000583732	KRBOX4	Q5JUW0	171 aa		12.06	□□□□□ -0.48
SREBF1-222	ENST00000583732	TPTE2P1	Q5T6R2	138 aa		12.06	□□□□□ -0.48
SREBF1-222	ENST00000583732	UTS2B	Q765I0	119 aa		12.06	□□□□□ -0.48
SREBF1-222	ENST00000583732	OR51A4	Q8NGJ6	313 aa		12.06	□□□□□ -0.48
SREBF1-222	ENST00000583732	OR13C3	Q8NGS6	347 aa		12.06	□□□□□ -0.48
SREBF1-222	ENST00000583732	SPSB1	Q96BD6	273 aa		12.06	□□□□□ -0.48
SREBF1-222	ENST00000583732	ZNF649	Q9BS31	505 aa		12.06	□□□□□ -0.48
SREBF1-222	ENST00000583732	PPIL3	Q9H2H8	161 aa	Known RBP	12.06	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms