RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 GLYATQ6IB77 296 aa1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 ZNF773Q6PK81 442 aa1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 TPGS1Q6ZTW0 290 aa1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 COPS6Q7L5N1 327 aa1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 TMEM144Q7Z5S9 345 aa1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 GALNT10Q86SR1 603 aa1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 MRPL52Q86TS9 123 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 RPRMLQ8N4K4 120 aa1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 LINC00304Q8N9R0 145 aa1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 OR4C13Q8NGP0 309 aa1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 CLHC1Q8NHS4 586 aa1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 CASTOR1Q8WTX7 329 aa1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 CCL17Q92583 94 aa1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 APOL4Q9BPW4 351 aa1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 ANAPC13Q9BS18 74 aa1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 TMEM38BQ9NVV0 291 aa1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 CYB5R1Q9UHQ9 305 aa1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 NXT1Q9UKK6 140 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 C14orf166Q9Y224 244 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 USP42Q9H9J4 1324 aaKnown RBP1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 BRWD3Q6RI45 1802 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 IGHV3-21A0A0B4J1V1 117 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 MYBPHLA2RUH7 354 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 VGLL3A8MV65 326 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 F8VP50 259 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 I3L4J1 428 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 CDIPTO14735 213 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 FABP7O15540 132 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 NEMFO60524 1076 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 MYO1DO94832 1006 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 LDOC1O95751 146 aaPredicted RBP1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 LCN1P31025 176 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 ZNF83P51522 516 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 PRKCDQ05655 676 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 ZNF235Q14590 738 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 CEACAM21Q3KPI0 293 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 ACTBL2Q562R1 376 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 LAMTOR1Q6IAA8 161 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 AMN1Q8IY45 258 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 CPNE9Q8IYJ1 553 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 TCAIMQ8N3R3 496 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 C3orf22Q8N5N4 141 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 CDRT4Q8N9R6 151 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 OR2Y1Q8NGV0 311 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 OR8S1Q8NH09 359 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 TWIST2Q8WVJ9 160 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 PYURFQ96I23 114 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 CATSPER2Q96P56 530 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 OR2V2Q96R30 315 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 TM2D3Q9BRN9 247 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 SHANK2-AS3Q9BTD1 123 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 SUCNR1Q9BXA5 334 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 ANGPTL4Q9BY76 406 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 SLC25A31Q9H0C2 315 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 RHOFQ9HBH0 211 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 MAT2BQ9NZL9 334 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 ZNF492Q9P255 531 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 TSPOAP1O95153 1857 aa1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 BRCA1P38398 1863 aaKnown RBP1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 COL27A1Q8IZC6 1860 aaPredicted RBP1.92□□□□□ -2.1
SMCHD1-209ENST00000583441 NOS1P29475 1434 aa1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 IGHV3-43A0A0B4J1X8 118 aa1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 GOLGA8QA0A0J9YX86 632 aa1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 A0A1B0GXF2 115 aa1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 A0A1W2PRG6 482 aa1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 ZNF233A6NK53 670 aa1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 RNASEK-C17orf49H0YIS7 233 aa1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 FFAR1O14842 300 aa1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 HLA-AP01891 365 aaKnown RBP1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 SOD3P08294 240 aa1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 UBE2KP61086 200 aa1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 HBG1P69891 147 aa1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 HBG2P69892 147 aa1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 CD164Q04900 197 aa1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 FMODQ06828 376 aa1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 BAMBIQ13145 260 aa1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 STX3Q13277 289 aa1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 OR4D1Q15615 310 aa1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 LDLRAD2Q5SZI1 272 aa1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 ERICH5Q6P6B1 374 aa1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 Q6ZT83 130 aa1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 DPPA2Q7Z7J5 298 aa1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 LRRC6Q86X45 466 aa1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 C17orf78Q8N4C9 275 aa1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 C2orf15Q8WU43 125 aaKnown RBP1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 PHF10Q8WUB8 498 aaKnown RBP1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 RBPMSQ93062 196 aaKnown RBP1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 FMC1Q96HJ9 113 aa1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 ZNF75AQ96N20 296 aa1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 PLA2G12AQ9BZM1 189 aa1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 ABCG5Q9H222 651 aa1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 TXNIPQ9H3M7 391 aa1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 VSIRQ9H7M9 311 aa1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 ZBED9Q6R2W3 1325 aa1.91□□□□□ -2.1
SMCHD1-209ENST00000583441 SHOX2O60902 331 aaPredicted RBP1.9□□□□□ -2.11
SMCHD1-209ENST00000583441 ENTPD6O75354 484 aa1.9□□□□□ -2.11
SMCHD1-209ENST00000583441 IGHV3-53P01767 116 aa1.9□□□□□ -2.11
SMCHD1-209ENST00000583441 NQO2P16083 231 aa1.9□□□□□ -2.11
SMCHD1-209ENST00000583441 FLOT2Q14254 428 aa1.9□□□□□ -2.11
SMCHD1-209ENST00000583441 TMEM241Q24JQ0 296 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms