RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 FBXW5Q969U6 566 aa7.94□□□□□ -1.14
SS18-220ENST00000582092 MARS2Q96GW9 593 aaKnown RBP7.94□□□□□ -1.14
SS18-220ENST00000582092 SEC22CQ9BRL7 303 aa7.94□□□□□ -1.14
SS18-220ENST00000582092 ALX4Q9H161 411 aaPredicted RBP7.94□□□□□ -1.14
SS18-220ENST00000582092 NECAP2Q9NVZ3 263 aa7.94□□□□□ -1.14
SS18-220ENST00000582092 AK3Q9UIJ7 227 aa7.94□□□□□ -1.14
SS18-220ENST00000582092 C14orf166Q9Y224 244 aaKnown RBP7.94□□□□□ -1.14
SS18-220ENST00000582092 RTTNQ86VV8 2226 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 IGKV1-12A0A0C4DH73 117 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 A0A0G2JNJ9 132 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 FAM172BPA6NC97 362 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 A8MXE2 369 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 H7C1Q1 480 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 SH2D1BO14796 132 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 SNAPC5O75971 98 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 NXPH2O95156 264 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 IGKV1D-12P01611 117 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 IGLV1-44P01699 117 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 SFTPBP07988 381 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 AKR1C4P17516 323 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 MPZP25189 248 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 CHATP28329 748 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 ERP29P30040 261 aaKnown RBP7.93□□□□□ -1.14
SS18-220ENST00000582092 SSTR2P30874 369 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 ERVS71-1P61550 626 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 NAAAQ02083 359 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 PSG7Q13046 419 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 CDK10Q15131 360 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 MICBQ29980 383 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 VAX1Q5SQQ9 334 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 CRIP3Q6Q6R5 217 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 VHLLQ6RSH7 139 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 TMEM108Q6UXF1 575 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 BATF2Q8N1L9 274 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 RPRMLQ8N4K4 120 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 OR10AD1Q8NGE0 317 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 ZFAND1Q8TCF1 268 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 ZNF431Q8TF32 576 aaPredicted RBP7.93□□□□□ -1.14
SS18-220ENST00000582092 HPSE2Q8WWQ2 592 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 HYLS1Q96M11 299 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 SPOCK3Q9BQ16 436 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 CLEC4MQ9H2X3 399 aaPredicted RBP7.93□□□□□ -1.14
SS18-220ENST00000582092 OR51I2Q9H344 312 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 RIMS4Q9H426 269 aaPredicted RBP7.93□□□□□ -1.14
SS18-220ENST00000582092 C12orf4Q9NQ89 552 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 SLC2A8Q9NY64 477 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 Q9UFV3 132 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 ZNF230Q9UIE0 474 aaPredicted RBP7.93□□□□□ -1.14
SS18-220ENST00000582092 DUSP13Q9UII6 198 aa7.93□□□□□ -1.14
SS18-220ENST00000582092 hCG_1807616A0A1W2PRN6 198 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 FAM90A27PA6NNH2 459 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 SYNGR1O43759 233 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 C1QBP02746 253 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 GLAP06280 429 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 OR4E1P0C645 316 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 ZNF44P15621 663 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 C4BPBP20851 252 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 KITLGP21583 273 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 TNFSF4P23510 183 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 VAMP1P23763 118 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 CD34P28906 385 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 CALCRP30988 508 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 MPV17P39210 176 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 NPBWR2P48146 333 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 MECP2P51608 486 aaKnown RBP7.92□□□□□ -1.14
SS18-220ENST00000582092 KLF3P57682 345 aaPredicted RBP7.92□□□□□ -1.14
SS18-220ENST00000582092 GMFBP60983 142 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 HERV-K104P61576 105 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 IL13RA1P78552 427 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 FAM27E3Q08E93 113 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 IL13RA2Q14627 380 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 PDCD1Q15116 288 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 MBNL2Q5VZF2 373 aaKnown RBP7.92□□□□□ -1.14
SS18-220ENST00000582092 ZNF626Q68DY1 528 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 BRICD5Q6PL45 260 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 MEX3BQ6ZN04 569 aaKnown RBP7.92□□□□□ -1.14
SS18-220ENST00000582092 NCCRP1Q6ZVX7 275 aaPredicted RBP7.92□□□□□ -1.14
SS18-220ENST00000582092 MYPOPQ86VE0 399 aaPredicted RBP7.92□□□□□ -1.14
SS18-220ENST00000582092 WFDC8Q8IUA0 241 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 PIAS4Q8N2W9 510 aaPredicted RBP7.92□□□□□ -1.14
SS18-220ENST00000582092 C12orf45Q8N5I9 185 aaPredicted RBP7.92□□□□□ -1.14
SS18-220ENST00000582092 SPICQ8N5J4 248 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 SCCPDHQ8NBX0 429 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 CAPSLQ8WWF8 208 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 MAFIPQ8WZ33 124 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 FYTTD1Q96QD9 318 aaKnown RBP7.92□□□□□ -1.14
SS18-220ENST00000582092 PHB2Q99623 299 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 SULT4A1Q9BR01 284 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 CHIAQ9BZP6 476 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 ZNF436Q9C0F3 470 aaPredicted RBP7.92□□□□□ -1.14
SS18-220ENST00000582092 MTCH1Q9NZJ7 389 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 ANXA10Q9UJ72 324 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 POU2F3Q9UKI9 436 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 PAIP2BQ9ULR5 123 aaKnown RBP7.92□□□□□ -1.14
SS18-220ENST00000582092 FZR1Q9UM11 496 aa7.92□□□□□ -1.14
SS18-220ENST00000582092 CREBBPQ92793 2442 aa7.91□□□□□ -1.14
SS18-220ENST00000582092 FOXI3A8MTJ6 420 aaPredicted RBP7.91□□□□□ -1.14
SS18-220ENST00000582092 SDCBPO00560 298 aaPredicted RBP7.91□□□□□ -1.14
SS18-220ENST00000582092 CDIPTO14735 213 aa7.91□□□□□ -1.14
SS18-220ENST00000582092 HS3ST1O14792 307 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms