RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 ANP32EQ9BTT0 268 aa0.82□□□□□ -2.28
SMCHD1-206ENST00000581631 IQCGQ9H095 443 aaKnown RBP0.82□□□□□ -2.28
SMCHD1-206ENST00000581631 BLZF1Q9H2G9 400 aa0.82□□□□□ -2.28
SMCHD1-206ENST00000581631 NCOR1P1Q9H4R4 102 aa0.82□□□□□ -2.28
SMCHD1-206ENST00000581631 POMKQ9H5K3 350 aa0.82□□□□□ -2.28
SMCHD1-206ENST00000581631 ARMC7Q9H6L4 198 aa0.82□□□□□ -2.28
SMCHD1-206ENST00000581631 CRLF2Q9HC73 371 aa0.82□□□□□ -2.28
SMCHD1-206ENST00000581631 RABL2AQ9UBK7 228 aaPredicted RBP0.82□□□□□ -2.28
SMCHD1-206ENST00000581631 TRAV8-7A0A075B6U6 113 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 LOC389332A0A1B0GUA5 103 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 ZNF860A6NHJ4 632 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 LY6LH3BQJ8 138 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 M0R1B8 84 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 COX7A2P2O60397 106 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 PLEKHA8P1O95397 391 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 RALBP11234 206 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 SFTPCP11686 197 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 IVDP26440 423 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 PEX19P40855 299 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 CSKP41240 450 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 HTR2BP41595 481 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 SLC35B1P78383 322 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 SPAG1Q07617 926 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 TNXAQ16473 311 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 ATP6V1FQ16864 119 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 ZNF404Q494X3 552 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 ANGPTL8Q6UXH0 198 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 GAPTQ8N292 157 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 ATPAF2Q8N5M1 289 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 OR51L1Q8NGJ5 315 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 MFSD8Q8NHS3 518 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 FMC1Q96HJ9 113 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 PYURFQ96I23 114 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 SHCBP1LQ9BZQ2 653 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 CLSTN2Q9H4D0 955 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 RGCCQ9H4X1 137 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 RPRD1BQ9NQG5 326 aaKnown RBP0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 TFR2Q9UP52 801 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 CCL26Q9Y258 94 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 HSPE1-MOB4S4R3N1 261 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 AK9Q5TCS8 1911 aa0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 PRRC2BQ5JSZ5 2229 aaKnown RBP0.81□□□□□ -2.28
SMCHD1-206ENST00000581631 A0A0J9YYE9 177 aa0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 C19orf71A6NCJ1 209 aa0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 F5H5T6 163 aa0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 H0YIV9 168 aa0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 ZNF701M0R085 212 aaPredicted RBP0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 SLC37A4O43826 429 aa0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 TRBC1P01850 177 aa0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 RLN2P04090 185 aa0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 IGKV5-2P06315 115 aa0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 TAC1P20366 129 aa0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 S100A2P29034 98 aa0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 TAL2Q16559 108 aa0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 TMEM176BQ3YBM2 270 aaPredicted RBP0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 DUPD1Q68J44 220 aa0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 SLC35D2Q76EJ3 337 aa0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 OTUD6AQ7L8S5 288 aa0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 ZNF321PQ8N8H1 164 aa0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 NT5CQ8TCD5 201 aa0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 ZFAND1Q8TCF1 268 aa0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 C22orf15Q8WYQ4 148 aa0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 CCL17Q92583 94 aa0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 CENPNQ96H22 339 aaPredicted RBP0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 ZNF625Q96I27 306 aaPredicted RBP0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 YPEL4Q96NS1 127 aa0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 BCL7BQ9BQE9 202 aa0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 UTP23Q9BRU9 249 aaKnown RBP0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 COA1Q9GZY4 146 aa0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 SLC38A1Q9H2H9 487 aa0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 C6orf50Q9HD87 102 aa0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 PEF1Q9UBV8 284 aaKnown RBP0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 PSME2Q9UL46 239 aa0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 ADAMTSL3P82987 1691 aa0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 STRCP1A6NGW2 1772 aa0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 PLXNA3P51805 1871 aa0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 GBF1Q92538 1859 aa0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 TMEM131Q92545 1883 aa0.8□□□□□ -2.28
SMCHD1-206ENST00000581631 SHANK3Q9BYB0 1731 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 LAMB2P55268 1798 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 A0A1B0GXF2 115 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 A0A1W2PRF3 423 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 A0A1W2PRM7 423 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 RBFOX3A6NFN3 312 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 CENPXA8MT69 81 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 C17orf98A8MV24 154 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 CASC3O15234 703 aaKnown RBP0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 GYG2O15488 501 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 ETHE1O95571 254 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 OR5AL1P0C617 328 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 GABRA1P14867 456 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 HTR2CP28335 458 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 BLVRBP30043 206 aaPredicted RBP0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 MAGEA6P43360 314 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 CEACAM16Q2WEN9 425 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 Q499Y3 187 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 PYCR3Q53H96 274 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 ACTBL2Q562R1 376 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 UBE2NLQ5JXB2 153 aa0.79□□□□□ -2.28
SMCHD1-206ENST00000581631 C6orf183Q5T699 404 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms