RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 RRP15Q9Y3B9 282 aaKnown RBP10.35□□□□□ -0.75
SNORD55-201ENST00000581525 SOX21Q9Y651 276 aaPredicted RBP10.35□□□□□ -0.75
SNORD55-201ENST00000581525 A0A0G2JK05 382 aa10.34□□□□□ -0.75
SNORD55-201ENST00000581525 A0A1W2PPH5 198 aa10.34□□□□□ -0.75
SNORD55-201ENST00000581525 RNF212BA8MTL3 300 aa10.34□□□□□ -0.75
SNORD55-201ENST00000581525 MGST3O14880 152 aa10.34□□□□□ -0.75
SNORD55-201ENST00000581525 OR2H2O95918 312 aa10.34□□□□□ -0.75
SNORD55-201ENST00000581525 TMEM225BP0DP42 221 aa10.34□□□□□ -0.75
SNORD55-201ENST00000581525 MAPK3P27361 379 aaPredicted RBP10.34□□□□□ -0.75
SNORD55-201ENST00000581525 ZNF93P35789 620 aaPredicted RBP10.34□□□□□ -0.75
SNORD55-201ENST00000581525 OR3A1P47881 315 aa10.34□□□□□ -0.75
SNORD55-201ENST00000581525 PPP3R1P63098 170 aa10.34□□□□□ -0.75
SNORD55-201ENST00000581525 GUCA2AQ02747 115 aa10.34□□□□□ -0.75
SNORD55-201ENST00000581525 IL13RA2Q14627 380 aa10.34□□□□□ -0.75
SNORD55-201ENST00000581525 ACSM3Q53FZ2 586 aa10.34□□□□□ -0.75
SNORD55-201ENST00000581525 PIP4P2Q8N4L2 257 aa10.34□□□□□ -0.75
SNORD55-201ENST00000581525 OR5D18Q8NGL1 313 aa10.34□□□□□ -0.75
SNORD55-201ENST00000581525 C22orf15Q8WYQ4 148 aa10.34□□□□□ -0.75
SNORD55-201ENST00000581525 PHYHIPQ92561 330 aa10.34□□□□□ -0.75
SNORD55-201ENST00000581525 LHX4Q969G2 390 aa10.34□□□□□ -0.75
SNORD55-201ENST00000581525 ORAI1Q96D31 301 aa10.34□□□□□ -0.75
SNORD55-201ENST00000581525 CNBD2Q96M20 576 aa10.34□□□□□ -0.75
SNORD55-201ENST00000581525 OR14A2Q96R54 314 aa10.34□□□□□ -0.75
SNORD55-201ENST00000581525 ONECUT1Q9UBC0 465 aa10.34□□□□□ -0.75
SNORD55-201ENST00000581525 BLOC1S6Q9UL45 172 aa10.34□□□□□ -0.75
SNORD55-201ENST00000581525 MEGF11A6BM72 1044 aa10.33□□□□□ -0.76
SNORD55-201ENST00000581525 TRIM77I1YAP6 450 aa10.33□□□□□ -0.76
SNORD55-201ENST00000581525 INMTO95050 263 aa10.33□□□□□ -0.76
SNORD55-201ENST00000581525 UCHL1P09936 223 aa10.33□□□□□ -0.76
SNORD55-201ENST00000581525 CPEP16870 476 aa10.33□□□□□ -0.76
SNORD55-201ENST00000581525 COMPP49747 757 aaPredicted RBP10.33□□□□□ -0.76
SNORD55-201ENST00000581525 CAPZA1P52907 286 aa10.33□□□□□ -0.76
SNORD55-201ENST00000581525 GABARAPL2P60520 117 aa10.33□□□□□ -0.76
SNORD55-201ENST00000581525 UBA52P62987 128 aaKnown RBP10.33□□□□□ -0.76
SNORD55-201ENST00000581525 SRSF2Q01130 221 aaKnown RBP10.33□□□□□ -0.76
SNORD55-201ENST00000581525 MLLT11Q13015 90 aaPredicted RBP10.33□□□□□ -0.76
SNORD55-201ENST00000581525 BLMHQ13867 455 aa10.33□□□□□ -0.76
SNORD55-201ENST00000581525 TBCEQ15813 527 aaPredicted RBP10.33□□□□□ -0.76
SNORD55-201ENST00000581525 DEFB112Q30KQ8 113 aa10.33□□□□□ -0.76
SNORD55-201ENST00000581525 DDI2Q5TDH0 399 aa10.33□□□□□ -0.76
SNORD55-201ENST00000581525 NCR3LG1Q68D85 454 aa10.33□□□□□ -0.76
SNORD55-201ENST00000581525 BRD3OSQ6XYD6 125 aa10.33□□□□□ -0.76
SNORD55-201ENST00000581525 Q6YL49 198 aa10.33□□□□□ -0.76
SNORD55-201ENST00000581525 TCF23Q7RTU1 214 aa10.33□□□□□ -0.76
SNORD55-201ENST00000581525 TMEM86BQ8N661 226 aa10.33□□□□□ -0.76
SNORD55-201ENST00000581525 ASCC1Q8N9N2 400 aaKnown RBP10.33□□□□□ -0.76
SNORD55-201ENST00000581525 OR4S1Q8NGB4 309 aa10.33□□□□□ -0.76
SNORD55-201ENST00000581525 PPP1R35Q8TAP8 253 aa10.33□□□□□ -0.76
SNORD55-201ENST00000581525 TNFAIP8L1Q8WVP5 186 aa10.33□□□□□ -0.76
SNORD55-201ENST00000581525 AJUBAQ96IF1 538 aa10.33□□□□□ -0.76
SNORD55-201ENST00000581525 C19orf24Q9BVV8 132 aa10.33□□□□□ -0.76
SNORD55-201ENST00000581525 EXOSC4Q9NPD3 245 aaKnown RBP10.33□□□□□ -0.76
SNORD55-201ENST00000581525 CKLFQ9UBR5 152 aa10.33□□□□□ -0.76
SNORD55-201ENST00000581525 GSTK1Q9Y2Q3 226 aa10.33□□□□□ -0.76
SNORD55-201ENST00000581525 LINC00312Q9Y6C7 94 aa10.33□□□□□ -0.76
SNORD55-201ENST00000581525 STAB1Q9NY15 2570 aa10.33□□□□□ -0.76
SNORD55-201ENST00000581525 IGHV3OR16-10A0A075B7F0 116 aa10.32□□□□□ -0.76
SNORD55-201ENST00000581525 A0A1W2PQ09 198 aa10.32□□□□□ -0.76
SNORD55-201ENST00000581525 TMEM89A2RUT3 159 aa10.32□□□□□ -0.76
SNORD55-201ENST00000581525 MAGEA13PA6NCF6 341 aa10.32□□□□□ -0.76
SNORD55-201ENST00000581525 SLC33A1O00400 549 aaPredicted RBP10.32□□□□□ -0.76
SNORD55-201ENST00000581525 ZNF780AO75290 641 aaPredicted RBP10.32□□□□□ -0.76
SNORD55-201ENST00000581525 ZNF728P0DKX0 622 aa10.32□□□□□ -0.76
SNORD55-201ENST00000581525 CGB3P0DN86 165 aa10.32□□□□□ -0.76
SNORD55-201ENST00000581525 CGB7P0DN87 165 aa10.32□□□□□ -0.76
SNORD55-201ENST00000581525 DUSP1P28562 367 aa10.32□□□□□ -0.76
SNORD55-201ENST00000581525 OR3A4PP47883 348 aa10.32□□□□□ -0.76
SNORD55-201ENST00000581525 ZNF273Q14593 569 aa10.32□□□□□ -0.76
SNORD55-201ENST00000581525 MED22Q15528 200 aa10.32□□□□□ -0.76
SNORD55-201ENST00000581525 TRAM1Q15629 374 aa10.32□□□□□ -0.76
SNORD55-201ENST00000581525 RBMS3Q6XE24 437 aaKnown RBP10.32□□□□□ -0.76
SNORD55-201ENST00000581525 TMEM91Q6ZNR0 172 aa10.32□□□□□ -0.76
SNORD55-201ENST00000581525 GDPD3Q7L5L3 318 aa10.32□□□□□ -0.76
SNORD55-201ENST00000581525 LRRTM1Q86UE6 522 aa10.32□□□□□ -0.76
SNORD55-201ENST00000581525 SATL1Q86VE3 508 aa10.32□□□□□ -0.76
SNORD55-201ENST00000581525 LDLRAD3Q86YD5 345 aa10.32□□□□□ -0.76
SNORD55-201ENST00000581525 OR4M1Q8NGD0 313 aa10.32□□□□□ -0.76
SNORD55-201ENST00000581525 MRPS24Q96EL2 167 aaKnown RBP10.32□□□□□ -0.76
SNORD55-201ENST00000581525 GPER1Q99527 375 aa10.32□□□□□ -0.76
SNORD55-201ENST00000581525 MGLLQ99685 303 aa10.32□□□□□ -0.76
SNORD55-201ENST00000581525 UQCC2Q9BRT2 126 aa10.32□□□□□ -0.76
SNORD55-201ENST00000581525 METTL9Q9H1A3 318 aa10.32□□□□□ -0.76
SNORD55-201ENST00000581525 HEXA-AS1Q9H8Q6 139 aa10.32□□□□□ -0.76
SNORD55-201ENST00000581525 PCDHB16Q9NRJ7 776 aa10.32□□□□□ -0.76
SNORD55-201ENST00000581525 TRAV24A0A0B4J272 114 aa10.31□□□□□ -0.76
SNORD55-201ENST00000581525 PNMA8CA0A1B0GUJ8 204 aa10.31□□□□□ -0.76
SNORD55-201ENST00000581525 hCG_1809904A0A1W2PP81 198 aa10.31□□□□□ -0.76
SNORD55-201ENST00000581525 A0A1W2PPE2 198 aa10.31□□□□□ -0.76
SNORD55-201ENST00000581525 A0A1W2PPK0 400 aa10.31□□□□□ -0.76
SNORD55-201ENST00000581525 A0A1W2PR64 198 aa10.31□□□□□ -0.76
SNORD55-201ENST00000581525 A0A1W2PRV1 198 aa10.31□□□□□ -0.76
SNORD55-201ENST00000581525 hADV38S2A0JD32 116 aa10.31□□□□□ -0.76
SNORD55-201ENST00000581525 FAM90A8PA6NJQ4 464 aa10.31□□□□□ -0.76
SNORD55-201ENST00000581525 DEGS1O15121 323 aa10.31□□□□□ -0.76
SNORD55-201ENST00000581525 RNASE1P07998 156 aaKnown RBP10.31□□□□□ -0.76
SNORD55-201ENST00000581525 CALCBP10092 127 aa10.31□□□□□ -0.76
SNORD55-201ENST00000581525 SRMP19623 302 aa10.31□□□□□ -0.76
SNORD55-201ENST00000581525 PSMA1P25786 263 aaKnown RBP10.31□□□□□ -0.76
SNORD55-201ENST00000581525 KCNJ3P48549 501 aa10.31□□□□□ -0.76
SNORD55-201ENST00000581525 EMX1Q04741 257 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms