RNA–Protein interactions for RNA: ENST00000580958.5

SS18-217, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 775 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-217ENST00000580958 KCNJ16Q9NPI9 418 aa8.91□□□□□ -0.98
SS18-217ENST00000580958 UFSP2Q9NUQ7 469 aa8.91□□□□□ -0.98
SS18-217ENST00000580958 RCC2Q9P258 522 aaKnown RBP8.91□□□□□ -0.98
SS18-217ENST00000580958 PLEKHA6Q9Y2H5 1048 aa8.91□□□□□ -0.98
SS18-217ENST00000580958 PKDREJQ9NTG1 2253 aa8.91□□□□□ -0.98
SS18-217ENST00000580958 IGSF10Q6WRI0 2623 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 DSCAMO60469 2012 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 TANC2Q9HCD6 1990 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 IGKV1D-8A0A087WSZ0 117 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 A0A0A6YYJ9 748 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 PLSCR5A0PG75 271 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 FAM221AA4D161 298 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 BOLA2-SMG1P6H3BVE0 249 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 PYCARD-AS1I3L0S3 204 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 SPRY3O43610 288 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 PEX14O75381 377 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 HNRNPCP07910 306 aaKnown RBP eCLIP8.9□□□□□ -0.98
SS18-217ENST00000580958 FCGR3AP08637 254 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 GNLYP22749 145 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 PMELP40967 661 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 UQCRFS1P47985 274 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 SELENOVP59797 346 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 MRPS15P82914 257 aaKnown RBP8.9□□□□□ -0.98
SS18-217ENST00000580958 SCGB2B2Q4G0G5 96 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 ACTBL2Q562R1 376 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 SPRNQ5BIV9 151 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 ADAM5Q6NVV9 412 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 Q6P435 159 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 AKAP14Q86UN6 197 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 POC1AQ8NBT0 407 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 OR13C8Q8NGS7 320 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 CA5BP1Q8WTZ4 195 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 GIMAP1Q8WWP7 306 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 DACT3Q96B18 629 aaPredicted RBP8.9□□□□□ -0.98
SS18-217ENST00000580958 PPP1R14BQ96C90 147 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 ELMOD3Q96FG2 381 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 LRRC46Q96FV0 321 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 PLPPR2Q96GM1 343 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 CHST6Q9GZX3 395 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 ESRP2Q9H6T0 727 aaKnown RBP8.9□□□□□ -0.98
SS18-217ENST00000580958 RHOFQ9HBH0 211 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 CA10Q9NS85 328 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 C1orf123Q9NWV4 160 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 SCP2D1Q9UJQ7 156 aa8.9□□□□□ -0.98
SS18-217ENST00000580958 ANKHD1Q8IWZ3 2542 aaKnown RBP8.9□□□□□ -0.99
SS18-217ENST00000580958 TRAV24A0A0B4J272 114 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 hCG_1807616A0A1W2PRN6 198 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 C7orf66A4D0T2 115 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 A8MV72 311 aaPredicted RBP8.89□□□□□ -0.99
SS18-217ENST00000580958 SIRPB1O00241 398 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 HSPB6O14558 160 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 WNT9BO14905 357 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 DEGS1O15121 323 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 NOS1APO75052 506 aaPredicted RBP8.89□□□□□ -0.99
SS18-217ENST00000580958 RLN1P04808 185 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 IFNA6P05013 189 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 CD3EP07766 207 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 ACAA1P09110 424 aaPredicted RBP8.89□□□□□ -0.99
SS18-217ENST00000580958 TRAPPC2P0DI81 140 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 TRAPPC2BP0DI82 140 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 ANXA7P20073 488 aaKnown RBP8.89□□□□□ -0.99
SS18-217ENST00000580958 DTYMKP23919 212 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 TAS2R46P59540 309 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 CBX3Q13185 183 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 ADIPOQQ15848 244 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 ST3GAL2Q16842 350 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 CHRFAM7AQ494W8 412 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 C4orf17Q53FE4 359 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 VAX1Q5SQQ9 334 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 WDR82Q6UXN9 313 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 DMRTC2Q8IXT2 367 aaPredicted RBP8.89□□□□□ -0.99
SS18-217ENST00000580958 SUMF2Q8NBJ7 301 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 GALNT11Q8NCW6 608 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 NEK7Q8TDX7 302 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 LRRC29Q8WV35 223 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 ITLN1Q8WWA0 313 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 RDH5Q92781 318 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 NEUROG1Q92886 237 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 MEGF10Q96KG7 1140 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 OR2V2Q96R30 315 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 PRRT1Q99946 306 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 OR51J1Q9H342 316 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 GHITMQ9H3K2 345 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 SPACA1Q9HBV2 294 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 HES4Q9HCC6 221 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 CHMP1AQ9HD42 196 aaPredicted RBP8.89□□□□□ -0.99
SS18-217ENST00000580958 SLC2A8Q9NY64 477 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 NDRG3Q9UGV2 375 aa8.89□□□□□ -0.99
SS18-217ENST00000580958 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.88□□□□□ -0.99
SS18-217ENST00000580958 SHISA9B4DS77 424 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 MCRIP1C9JLW8 97 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 H3BUI4 141 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 SDCBPO00560 298 aaPredicted RBP8.88□□□□□ -0.99
SS18-217ENST00000580958 HS3ST1O14792 307 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 TPD52L2O43399 206 aaKnown RBP8.88□□□□□ -0.99
SS18-217ENST00000580958 PRAF2O60831 178 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 CCNKO75909 580 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 PTBP3O95758 552 aaKnown RBP8.88□□□□□ -0.99
SS18-217ENST00000580958 IGHV1-46P01743 117 aa8.88□□□□□ -0.99
SS18-217ENST00000580958 IL5P05113 134 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms