RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 CHCHD3Q9NX63 227 aaKnown RBP10.88□□□□□ -0.67
TRAF4-214ENST00000580073 HHLA2Q9UM44 414 aa10.88□□□□□ -0.67
TRAF4-214ENST00000580073 ERGIC3Q9Y282 383 aa10.88□□□□□ -0.67
TRAF4-214ENST00000580073 PQLC2LA1A4F0 135 aa10.87□□□□□ -0.67
TRAF4-214ENST00000580073 TMEM212A6NML5 194 aa10.87□□□□□ -0.67
TRAF4-214ENST00000580073 ZNF732B4DXR9 585 aa10.87□□□□□ -0.67
TRAF4-214ENST00000580073 G3V4G9 280 aa10.87□□□□□ -0.67
TRAF4-214ENST00000580073 H3BUI4 141 aa10.87□□□□□ -0.67
TRAF4-214ENST00000580073 MYL12BO14950 172 aa10.87□□□□□ -0.67
TRAF4-214ENST00000580073 PEX14O75381 377 aa10.87□□□□□ -0.67
TRAF4-214ENST00000580073 VSIG10L2P0DP72 767 aa10.87□□□□□ -0.67
TRAF4-214ENST00000580073 PSG2P11465 335 aa10.87□□□□□ -0.67
TRAF4-214ENST00000580073 AMY2BP19961 511 aa10.87□□□□□ -0.67
TRAF4-214ENST00000580073 RPL31P62899 125 aaKnown RBP10.87□□□□□ -0.67
TRAF4-214ENST00000580073 EMX1Q04741 257 aaPredicted RBP10.87□□□□□ -0.67
TRAF4-214ENST00000580073 MED21Q13503 144 aa10.87□□□□□ -0.67
TRAF4-214ENST00000580073 INSL4Q14641 139 aa10.87□□□□□ -0.67
TRAF4-214ENST00000580073 FAM189A2Q15884 450 aa10.87□□□□□ -0.67
TRAF4-214ENST00000580073 LY6EQ16553 131 aa10.87□□□□□ -0.67
TRAF4-214ENST00000580073 PLCXD3Q63HM9 321 aa10.87□□□□□ -0.67
TRAF4-214ENST00000580073 ZNRF1Q8ND25 227 aa10.87□□□□□ -0.67
TRAF4-214ENST00000580073 OR5A2Q8NGI9 324 aa10.87□□□□□ -0.67
TRAF4-214ENST00000580073 MYCBPQ99417 103 aaPredicted RBP10.87□□□□□ -0.67
TRAF4-214ENST00000580073 CCDC90BQ9GZT6 254 aa10.87□□□□□ -0.67
TRAF4-214ENST00000580073 OR51I2Q9H344 312 aa10.87□□□□□ -0.67
TRAF4-214ENST00000580073 ABCB10Q9NRK6 738 aa10.87□□□□□ -0.67
TRAF4-214ENST00000580073 IGKV1D-17A0A075B6S4 117 aa10.86□□□□□ -0.67
TRAF4-214ENST00000580073 TRBV5-5A0A0J9YX44 114 aa10.86□□□□□ -0.67
TRAF4-214ENST00000580073 RHBDL1O75783 438 aa10.86□□□□□ -0.67
TRAF4-214ENST00000580073 CELP19835 753 aa10.86□□□□□ -0.67
TRAF4-214ENST00000580073 SOX2P48431 317 aa10.86□□□□□ -0.67
TRAF4-214ENST00000580073 DLX1P56177 255 aa10.86□□□□□ -0.67
TRAF4-214ENST00000580073 GABARAPL2P60520 117 aa10.86□□□□□ -0.67
TRAF4-214ENST00000580073 PRB3Q04118 309 aaPredicted RBP10.86□□□□□ -0.67
TRAF4-214ENST00000580073 SPHARQ15513 63 aa10.86□□□□□ -0.67
TRAF4-214ENST00000580073 ARSJQ5FYB0 599 aaPredicted RBP10.86□□□□□ -0.67
TRAF4-214ENST00000580073 CALHM1Q8IU99 346 aa10.86□□□□□ -0.67
TRAF4-214ENST00000580073 SPARTQ8N0X7 666 aa10.86□□□□□ -0.67
TRAF4-214ENST00000580073 OR13C3Q8NGS6 347 aa10.86□□□□□ -0.67
TRAF4-214ENST00000580073 OPALINQ96PE5 141 aa10.86□□□□□ -0.67
TRAF4-214ENST00000580073 MND1Q9BWT6 205 aa10.86□□□□□ -0.67
TRAF4-214ENST00000580073 YTHDF1Q9BYJ9 559 aaKnown RBP10.86□□□□□ -0.67
TRAF4-214ENST00000580073 CHST5Q9GZS9 411 aa10.86□□□□□ -0.67
TRAF4-214ENST00000580073 ELL3Q9HB65 397 aaPredicted RBP10.86□□□□□ -0.67
TRAF4-214ENST00000580073 ZNF222Q9UK12 451 aa10.86□□□□□ -0.67
TRAF4-214ENST00000580073 TBL2Q9Y4P3 447 aaKnown RBP10.86□□□□□ -0.67
TRAF4-214ENST00000580073 VGLL3A8MV65 326 aa10.85□□□□□ -0.67
TRAF4-214ENST00000580073 J3QT63 122 aa10.85□□□□□ -0.67
TRAF4-214ENST00000580073 RBP4P02753 201 aa10.85□□□□□ -0.67
TRAF4-214ENST00000580073 ATF1P18846 271 aa10.85□□□□□ -0.67
TRAF4-214ENST00000580073 GP2P55259 537 aaKnown RBP10.85□□□□□ -0.67
TRAF4-214ENST00000580073 BDH1Q02338 343 aa10.85□□□□□ -0.67
TRAF4-214ENST00000580073 MED22Q15528 200 aa10.85□□□□□ -0.67
TRAF4-214ENST00000580073 HCP5Q6MZN7 132 aa10.85□□□□□ -0.67
TRAF4-214ENST00000580073 ZNF529Q6P280 563 aa10.85□□□□□ -0.67
TRAF4-214ENST00000580073 HAGHLQ6PII5 290 aaPredicted RBP10.85□□□□□ -0.67
TRAF4-214ENST00000580073 ACP7Q6ZNF0 438 aa10.85□□□□□ -0.67
TRAF4-214ENST00000580073 ANGPTL5Q86XS5 388 aa10.85□□□□□ -0.67
TRAF4-214ENST00000580073 NDUFA11Q86Y39 141 aa10.85□□□□□ -0.67
TRAF4-214ENST00000580073 ZNF573Q86YE8 665 aa10.85□□□□□ -0.67
TRAF4-214ENST00000580073 MKXQ8IYA7 352 aa10.85□□□□□ -0.67
TRAF4-214ENST00000580073 POC1AQ8NBT0 407 aa10.85□□□□□ -0.67
TRAF4-214ENST00000580073 CCDC54Q8NEL0 328 aa10.85□□□□□ -0.67
TRAF4-214ENST00000580073 TRMT10AQ8TBZ6 339 aaKnown RBP10.85□□□□□ -0.67
TRAF4-214ENST00000580073 MRAPQ8TCY5 172 aa10.85□□□□□ -0.67
TRAF4-214ENST00000580073 HAVCR2Q8TDQ0 301 aa10.85□□□□□ -0.67
TRAF4-214ENST00000580073 AQP3Q92482 292 aa10.85□□□□□ -0.67
TRAF4-214ENST00000580073 NKX3-1Q99801 234 aaPredicted RBP10.85□□□□□ -0.67
TRAF4-214ENST00000580073 COMMD4Q9H0A8 199 aa10.85□□□□□ -0.67
TRAF4-214ENST00000580073 ACOT13Q9NPJ3 140 aa10.85□□□□□ -0.67
TRAF4-214ENST00000580073 C19orf12Q9NSK7 152 aa10.85□□□□□ -0.67
TRAF4-214ENST00000580073 NECAP2Q9NVZ3 263 aa10.85□□□□□ -0.67
TRAF4-214ENST00000580073 FOXJ3Q9UPW0 622 aa10.85□□□□□ -0.67
TRAF4-214ENST00000580073 TRBV5-7A0A0A0MS05 114 aa10.84□□□□□ -0.67
TRAF4-214ENST00000580073 SYNGR1O43759 233 aa10.84□□□□□ -0.67
TRAF4-214ENST00000580073 NXPH2O95156 264 aa10.84□□□□□ -0.67
TRAF4-214ENST00000580073 TFF1P04155 84 aa10.84□□□□□ -0.67
TRAF4-214ENST00000580073 CD1AP06126 327 aa10.84□□□□□ -0.67
TRAF4-214ENST00000580073 TPBGQ13641 420 aa10.84□□□□□ -0.67
TRAF4-214ENST00000580073 TBCEQ15813 527 aaPredicted RBP10.84□□□□□ -0.67
TRAF4-214ENST00000580073 UTS2BQ765I0 119 aa10.84□□□□□ -0.67
TRAF4-214ENST00000580073 PARP16Q8N5Y8 322 aa10.84□□□□□ -0.67
TRAF4-214ENST00000580073 C11orf44Q8N8P7 122 aa10.84□□□□□ -0.67
TRAF4-214ENST00000580073 OR51A2Q8NGJ7 313 aa10.84□□□□□ -0.67
TRAF4-214ENST00000580073 OR13C9Q8NGT0 318 aa10.84□□□□□ -0.67
TRAF4-214ENST00000580073 OR13D1Q8NGV5 346 aa10.84□□□□□ -0.67
TRAF4-214ENST00000580073 PPP1R35Q8TAP8 253 aa10.84□□□□□ -0.67
TRAF4-214ENST00000580073 C10orf35Q96D05 121 aa10.84□□□□□ -0.67
TRAF4-214ENST00000580073 ZNF488Q96MN9 340 aa10.84□□□□□ -0.67
TRAF4-214ENST00000580073 SPACA5Q96QH8 159 aa10.84□□□□□ -0.67
TRAF4-214ENST00000580073 PRSS22Q9GZN4 317 aa10.84□□□□□ -0.67
TRAF4-214ENST00000580073 PLEKHA1Q9HB21 404 aa10.84□□□□□ -0.67
TRAF4-214ENST00000580073 TAS2R4Q9NYW5 299 aa10.84□□□□□ -0.67
TRAF4-214ENST00000580073 DHDHQ9UQ10 334 aa10.84□□□□□ -0.67
TRAF4-214ENST00000580073 TCF19Q9Y242 345 aa10.84□□□□□ -0.67
TRAF4-214ENST00000580073 TRAV8-7A0A075B6U6 113 aa10.83□□□□□ -0.68
TRAF4-214ENST00000580073 FAM230AA0A1W2PPH8 454 aa10.83□□□□□ -0.68
TRAF4-214ENST00000580073 A0A1W2PPK0 400 aa10.83□□□□□ -0.68
TRAF4-214ENST00000580073 MAGEA13PA6NCF6 341 aa10.83□□□□□ -0.68
TRAF4-214ENST00000580073 RFPL4AA6NLU0 287 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms