RNA–Protein interactions for RNA: ENST00000579558.5

SHMT1-206, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2

Gene SHMT1, Length 1,077 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-206ENST00000579558 DYRK2Q92630 601 aa19.49■□□□□ 0.71
SHMT1-206ENST00000579558 CPNE2Q96FN4 548 aaPredicted RBP19.49■□□□□ 0.71
SHMT1-206ENST00000579558 ZNF747Q9BV97 191 aa19.49■□□□□ 0.71
SHMT1-206ENST00000579558 PSORS1C1Q9UIG5 152 aa19.49■□□□□ 0.71
SHMT1-206ENST00000579558 ZNF281Q9Y2X9 895 aa19.49■□□□□ 0.71
SHMT1-206ENST00000579558 DSCAML1Q8TD84 2053 aa19.48■□□□□ 0.71
SHMT1-206ENST00000579558 C17orf98A8MV24 154 aa19.48■□□□□ 0.71
SHMT1-206ENST00000579558 GPR137BO60478 399 aa19.48■□□□□ 0.71
SHMT1-206ENST00000579558 ZNF728P0DKX0 622 aa19.48■□□□□ 0.71
SHMT1-206ENST00000579558 MDKP21741 143 aaPredicted RBP19.48■□□□□ 0.71
SHMT1-206ENST00000579558 ASPHD2Q6ICH7 369 aa19.48■□□□□ 0.71
SHMT1-206ENST00000579558 AHSA2Q719I0 299 aa19.48■□□□□ 0.71
SHMT1-206ENST00000579558 SATL1Q86VE3 508 aa19.48■□□□□ 0.71
SHMT1-206ENST00000579558 STX19Q8N4C7 294 aa19.48■□□□□ 0.71
SHMT1-206ENST00000579558 TPRX1Q8N7U7 411 aa19.48■□□□□ 0.71
SHMT1-206ENST00000579558 BPIFB6Q8NFQ5 453 aa19.48■□□□□ 0.71
SHMT1-206ENST00000579558 TFAP2CQ92754 450 aa19.48■□□□□ 0.71
SHMT1-206ENST00000579558 TMEM106AQ96A25 262 aa19.48■□□□□ 0.71
SHMT1-206ENST00000579558 GPER1Q99527 375 aa19.48■□□□□ 0.71
SHMT1-206ENST00000579558 PLCXD1Q9NUJ7 323 aa19.48■□□□□ 0.71
SHMT1-206ENST00000579558 C1RLQ9NZP8 487 aa19.48■□□□□ 0.71
SHMT1-206ENST00000579558 hADV38S2A0JD32 116 aa19.47■□□□□ 0.71
SHMT1-206ENST00000579558 MGST3O14880 152 aa19.47■□□□□ 0.71
SHMT1-206ENST00000579558 OR2H2O95918 312 aa19.47■□□□□ 0.71
SHMT1-206ENST00000579558 OR3A1P47881 315 aa19.47■□□□□ 0.71
SHMT1-206ENST00000579558 BMXP51813 675 aa19.47■□□□□ 0.71
SHMT1-206ENST00000579558 RAG2P55895 527 aa19.47■□□□□ 0.71
SHMT1-206ENST00000579558 RPL15P61313 204 aaKnown RBP19.47■□□□□ 0.71
SHMT1-206ENST00000579558 TAF9Q16594 264 aa19.47■□□□□ 0.71
SHMT1-206ENST00000579558 DMKNQ6E0U4 476 aaPredicted RBP19.47■□□□□ 0.71
SHMT1-206ENST00000579558 TCF23Q7RTU1 214 aa19.47■□□□□ 0.71
SHMT1-206ENST00000579558 ZFP41Q8N8Y5 198 aa19.47■□□□□ 0.71
SHMT1-206ENST00000579558 ZNF485Q8NCK3 441 aa19.47■□□□□ 0.71
SHMT1-206ENST00000579558 OR13C5Q8NGS8 318 aa19.47■□□□□ 0.71
SHMT1-206ENST00000579558 GHSRQ92847 366 aa19.47■□□□□ 0.71
SHMT1-206ENST00000579558 ZNF714Q96N38 554 aa19.47■□□□□ 0.71
SHMT1-206ENST00000579558 RBP4P02753 201 aa19.46■□□□□ 0.71
SHMT1-206ENST00000579558 ZNF44P15621 663 aa19.46■□□□□ 0.71
SHMT1-206ENST00000579558 PPP3R1P63098 170 aa19.46■□□□□ 0.71
SHMT1-206ENST00000579558 SCN1BQ07699 218 aa19.46■□□□□ 0.71
SHMT1-206ENST00000579558 BEND2Q8NDZ0 799 aa19.46■□□□□ 0.71
SHMT1-206ENST00000579558 OR4F5Q8NH21 305 aa19.46■□□□□ 0.71
SHMT1-206ENST00000579558 TNFAIP8L1Q8WVP5 186 aa19.46■□□□□ 0.71
SHMT1-206ENST00000579558 C17orf50Q8WW18 174 aa19.46■□□□□ 0.71
SHMT1-206ENST00000579558 LINC00312Q9Y6C7 94 aa19.46■□□□□ 0.71
SHMT1-206ENST00000579558 ERICH4A6NGS2 130 aa19.45■□□□□ 0.7
SHMT1-206ENST00000579558 POM121CA8CG34 1229 aa19.45■□□□□ 0.7
SHMT1-206ENST00000579558 GABRPO00591 440 aa19.45■□□□□ 0.7
SHMT1-206ENST00000579558 MYL12BO14950 172 aa19.45■□□□□ 0.7
SHMT1-206ENST00000579558 NDUFA7O95182 113 aa19.45■□□□□ 0.7
SHMT1-206ENST00000579558 MTNR1BP49286 362 aa19.45■□□□□ 0.7
SHMT1-206ENST00000579558 LGALS4P56470 323 aa19.45■□□□□ 0.7
SHMT1-206ENST00000579558 TAS2R43P59537 309 aa19.45■□□□□ 0.7
SHMT1-206ENST00000579558 RELBQ01201 579 aa19.45■□□□□ 0.7
SHMT1-206ENST00000579558 SHISA2Q6UWI4 295 aa19.45■□□□□ 0.7
SHMT1-206ENST00000579558 GDPGP1Q6ZNW5 385 aa19.45■□□□□ 0.7
SHMT1-206ENST00000579558 PXT1Q8NFP0 134 aa19.45■□□□□ 0.7
SHMT1-206ENST00000579558 FAM192AQ9GZU8 254 aa19.45■□□□□ 0.7
SHMT1-206ENST00000579558 VPREB3Q9UKI3 123 aa19.45■□□□□ 0.7
SHMT1-206ENST00000579558 MMP24Q9Y5R2 645 aa19.45■□□□□ 0.7
SHMT1-206ENST00000579558 IGHV1-8P0DP01 117 aa19.44■□□□□ 0.7
SHMT1-206ENST00000579558 ERP29P30040 261 aaKnown RBP19.44■□□□□ 0.7
SHMT1-206ENST00000579558 C21orf33P30042 268 aaPredicted RBP19.44■□□□□ 0.7
SHMT1-206ENST00000579558 P2RX3P56373 397 aa19.44■□□□□ 0.7
SHMT1-206ENST00000579558 OR13D1Q8NGV5 346 aa19.44■□□□□ 0.7
SHMT1-206ENST00000579558 OR5R1Q8NH85 324 aa19.44■□□□□ 0.7
SHMT1-206ENST00000579558 NRG4Q8WWG1 115 aa19.44■□□□□ 0.7
SHMT1-206ENST00000579558 AJUBAQ96IF1 538 aa19.44■□□□□ 0.7
SHMT1-206ENST00000579558 PPA2Q9H2U2 334 aa19.44■□□□□ 0.7
SHMT1-206ENST00000579558 BEX1Q9HBH7 125 aa19.44■□□□□ 0.7
SHMT1-206ENST00000579558 TMEM138Q9NPI0 162 aa19.44■□□□□ 0.7
SHMT1-206ENST00000579558 TRBV5-5A0A0J9YX44 114 aa19.43■□□□□ 0.7
SHMT1-206ENST00000579558 PNMA8CA0A1B0GUJ8 204 aa19.43■□□□□ 0.7
SHMT1-206ENST00000579558 A0A1B0GUS0 222 aa19.43■□□□□ 0.7
SHMT1-206ENST00000579558 ALDOBP05062 364 aa19.43■□□□□ 0.7
SHMT1-206ENST00000579558 LMO1P25800 156 aa19.43■□□□□ 0.7
SHMT1-206ENST00000579558 AQP4P55087 323 aa19.43■□□□□ 0.7
SHMT1-206ENST00000579558 YIF1BQ5BJH7 314 aa19.43■□□□□ 0.7
SHMT1-206ENST00000579558 DDI2Q5TDH0 399 aa19.43■□□□□ 0.7
SHMT1-206ENST00000579558 Q6P435 159 aa19.43■□□□□ 0.7
SHMT1-206ENST00000579558 TRAPPC6BQ86SZ2 158 aa19.43■□□□□ 0.7
SHMT1-206ENST00000579558 CHST4Q8NCG5 386 aa19.43■□□□□ 0.7
SHMT1-206ENST00000579558 ORAI1Q96D31 301 aa19.43■□□□□ 0.7
SHMT1-206ENST00000579558 PGLYRP3Q96LB9 341 aa19.43■□□□□ 0.7
SHMT1-206ENST00000579558 NKX3-1Q99801 234 aaPredicted RBP19.43■□□□□ 0.7
SHMT1-206ENST00000579558 FKBP14Q9NWM8 211 aa19.43■□□□□ 0.7
SHMT1-206ENST00000579558 A0A0G2JK05 382 aa19.42■□□□□ 0.7
SHMT1-206ENST00000579558 FUOMA2VDF0 154 aa19.42■□□□□ 0.7
SHMT1-206ENST00000579558 H3BUX3 64 aa19.42■□□□□ 0.7
SHMT1-206ENST00000579558 DEGS1O15121 323 aa19.42■□□□□ 0.7
SHMT1-206ENST00000579558 BDKRB2P30411 391 aa19.42■□□□□ 0.7
SHMT1-206ENST00000579558 WNT4P56705 351 aa19.42■□□□□ 0.7
SHMT1-206ENST00000579558 RSU1Q15404 277 aa19.42■□□□□ 0.7
SHMT1-206ENST00000579558 Q499Y3 187 aa19.42■□□□□ 0.7
SHMT1-206ENST00000579558 ELP2Q6IA86 826 aa19.42■□□□□ 0.7
SHMT1-206ENST00000579558 NR1H4Q96RI1 486 aaPredicted RBP19.42■□□□□ 0.7
SHMT1-206ENST00000579558 SSX3Q99909 188 aa19.42■□□□□ 0.7
SHMT1-206ENST00000579558 MEGF9Q9H1U4 602 aa19.42■□□□□ 0.7
SHMT1-206ENST00000579558 H0YJX3 145 aa19.41■□□□□ 0.7
SHMT1-206ENST00000579558 SLC33A1O00400 549 aaPredicted RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms