RNA–Protein interactions for RNA: ENST00000579419.5

IFT20-209, Transcript of intraflagellar transport 20, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene IFT20, Length 787 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-209ENST00000579419 GLIPR1P48060 266 aa12.25□□□□□ -0.45
IFT20-209ENST00000579419 NPBWR2P48146 333 aa12.25□□□□□ -0.45
IFT20-209ENST00000579419 VEGFCP49767 419 aa12.25□□□□□ -0.45
IFT20-209ENST00000579419 FOXE3Q13461 319 aa12.25□□□□□ -0.45
IFT20-209ENST00000579419 FAM27D1Q5T7N8 215 aa12.25□□□□□ -0.45
IFT20-209ENST00000579419 SLX4IPQ5VYV7 408 aa12.25□□□□□ -0.45
IFT20-209ENST00000579419 FAM53AQ6NSI3 398 aaPredicted RBP12.25□□□□□ -0.45
IFT20-209ENST00000579419 RNF152Q8N8N0 203 aa12.25□□□□□ -0.45
IFT20-209ENST00000579419 BBS1Q8NFJ9 593 aa12.25□□□□□ -0.45
IFT20-209ENST00000579419 RPEQ96AT9 228 aa12.25□□□□□ -0.45
IFT20-209ENST00000579419 RBFOX1Q9NWB1 397 aaKnown RBP12.25□□□□□ -0.45
IFT20-209ENST00000579419 GTF2A1LQ9UNN4 478 aa12.25□□□□□ -0.45
IFT20-209ENST00000579419 SIRT4Q9Y6E7 314 aaPredicted RBP12.25□□□□□ -0.45
IFT20-209ENST00000579419 TRGV10A0A0A0MS01 117 aa12.24□□□□□ -0.45
IFT20-209ENST00000579419 A0A1B0GTI1 187 aa12.24□□□□□ -0.45
IFT20-209ENST00000579419 RBMY1BA6NDE4 496 aaKnown RBP12.24□□□□□ -0.45
IFT20-209ENST00000579419 RBMY1EA6NEQ0 496 aaKnown RBP12.24□□□□□ -0.45
IFT20-209ENST00000579419 AP4M1O00189 453 aa12.24□□□□□ -0.45
IFT20-209ENST00000579419 GMNNO75496 209 aa12.24□□□□□ -0.45
IFT20-209ENST00000579419 RBMY1DP0C7P1 496 aaKnown RBP12.24□□□□□ -0.45
IFT20-209ENST00000579419 INSL3P51460 131 aa12.24□□□□□ -0.45
IFT20-209ENST00000579419 PRRX1P54821 245 aa12.24□□□□□ -0.45
IFT20-209ENST00000579419 AESQ08117 197 aa12.24□□□□□ -0.45
IFT20-209ENST00000579419 KPNB1Q14974 876 aaKnown RBP12.24□□□□□ -0.45
IFT20-209ENST00000579419 SRSF7Q16629 238 aaKnown RBP eCLIP12.24□□□□□ -0.45
IFT20-209ENST00000579419 KIAA1109Q2LD37 5005 aa12.24□□□□□ -0.45
IFT20-209ENST00000579419 SLC25A26Q70HW3 274 aa12.24□□□□□ -0.45
IFT20-209ENST00000579419 LEAP2Q969E1 77 aa12.24□□□□□ -0.45
IFT20-209ENST00000579419 ITFG2Q969R8 447 aa12.24□□□□□ -0.45
IFT20-209ENST00000579419 CREB3L1Q96BA8 519 aa12.24□□□□□ -0.45
IFT20-209ENST00000579419 NIPSNAP1Q9BPW8 284 aa12.24□□□□□ -0.45
IFT20-209ENST00000579419 ING3Q9NXR8 418 aa12.24□□□□□ -0.45
IFT20-209ENST00000579419 COPS3Q9UNS2 423 aa12.24□□□□□ -0.45
IFT20-209ENST00000579419 A0A087X0M5 115 aa12.23□□□□□ -0.45
IFT20-209ENST00000579419 A0A1B0GX30 115 aa12.23□□□□□ -0.45
IFT20-209ENST00000579419 PRR23D1E9PI22 279 aaPredicted RBP12.23□□□□□ -0.45
IFT20-209ENST00000579419 H3BSH0 61 aa12.23□□□□□ -0.45
IFT20-209ENST00000579419 LDLRAD4O15165 306 aa12.23□□□□□ -0.45
IFT20-209ENST00000579419 MAGEB4O15481 346 aaPredicted RBP12.23□□□□□ -0.45
IFT20-209ENST00000579419 SRSF10O75494 262 aaKnown RBP12.23□□□□□ -0.45
IFT20-209ENST00000579419 KRT36O76013 467 aa12.23□□□□□ -0.45
IFT20-209ENST00000579419 ELANEP08246 267 aa12.23□□□□□ -0.45
IFT20-209ENST00000579419 MRPL3P09001 348 aaKnown RBP12.23□□□□□ -0.45
IFT20-209ENST00000579419 PRR23D2P0DMB1 279 aaPredicted RBP12.23□□□□□ -0.45
IFT20-209ENST00000579419 NFYBP25208 207 aa12.23□□□□□ -0.45
IFT20-209ENST00000579419 CFHR3Q02985 330 aa12.23□□□□□ -0.45
IFT20-209ENST00000579419 UBE2V2Q15819 145 aa12.23□□□□□ -0.45
IFT20-209ENST00000579419 C17orf58Q2M2W7 97 aa12.23□□□□□ -0.45
IFT20-209ENST00000579419 PLEKHG7Q6ZR37 379 aa12.23□□□□□ -0.45
IFT20-209ENST00000579419 LHFPL2Q6ZUX7 228 aa12.23□□□□□ -0.45
IFT20-209ENST00000579419 CORO2AQ92828 525 aa12.23□□□□□ -0.45
IFT20-209ENST00000579419 RBMXL1Q96E39 390 aaKnown RBP12.23□□□□□ -0.45
IFT20-209ENST00000579419 DGCR6LQ9BY27 220 aa12.23□□□□□ -0.45
IFT20-209ENST00000579419 GNB4Q9HAV0 340 aa12.23□□□□□ -0.45
IFT20-209ENST00000579419 SPAG4Q9NPE6 437 aa12.23□□□□□ -0.45
IFT20-209ENST00000579419 TAS2R3Q9NYW6 316 aa12.23□□□□□ -0.45
IFT20-209ENST00000579419 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.23□□□□□ -0.45
IFT20-209ENST00000579419 ARPC2O15144 300 aa12.22□□□□□ -0.45
IFT20-209ENST00000579419 ENTPD6O75354 484 aa12.22□□□□□ -0.45
IFT20-209ENST00000579419 SAP30O75446 220 aa12.22□□□□□ -0.45
IFT20-209ENST00000579419 BCL3P20749 454 aa12.22□□□□□ -0.45
IFT20-209ENST00000579419 DEGS2Q6QHC5 323 aa12.22□□□□□ -0.45
IFT20-209ENST00000579419 CPOQ8IVL8 374 aa12.22□□□□□ -0.45
IFT20-209ENST00000579419 OR1N2Q8NGR9 330 aa12.22□□□□□ -0.45
IFT20-209ENST00000579419 OR9G1Q8NH87 305 aa12.22□□□□□ -0.45
IFT20-209ENST00000579419 TEX47Q8TBZ9 253 aa12.22□□□□□ -0.45
IFT20-209ENST00000579419 DCUN1D4Q92564 292 aa12.22□□□□□ -0.45
IFT20-209ENST00000579419 NSMCE2Q96MF7 247 aa12.22□□□□□ -0.45
IFT20-209ENST00000579419 OR5B12Q96R08 314 aa12.22□□□□□ -0.45
IFT20-209ENST00000579419 MROQ9BYG7 248 aa12.22□□□□□ -0.45
IFT20-209ENST00000579419 ABCG5Q9H222 651 aa12.22□□□□□ -0.45
IFT20-209ENST00000579419 SEBOXQ9HB31 216 aaPredicted RBP12.22□□□□□ -0.45
IFT20-209ENST00000579419 IGHV3-72A0A0B4J1Y9 119 aa12.21□□□□□ -0.45
IFT20-209ENST00000579419 IGHV4-30-4P0DP06 118 aa12.21□□□□□ -0.45
IFT20-209ENST00000579419 PRKACAP17612 351 aa12.21□□□□□ -0.45
IFT20-209ENST00000579419 SLC2A5P22732 501 aa12.21□□□□□ -0.45
IFT20-209ENST00000579419 PTGFRP43088 359 aa12.21□□□□□ -0.45
IFT20-209ENST00000579419 POU3F4P49335 361 aa12.21□□□□□ -0.45
IFT20-209ENST00000579419 RPS7P62081 194 aaKnown RBP12.21□□□□□ -0.45
IFT20-209ENST00000579419 GNB1P62873 340 aa12.21□□□□□ -0.45
IFT20-209ENST00000579419 ZNF829Q3KNS6 432 aaPredicted RBP12.21□□□□□ -0.45
IFT20-209ENST00000579419 ZNF429Q86V71 674 aa12.21□□□□□ -0.45
IFT20-209ENST00000579419 CATSPERDQ86XM0 798 aa12.21□□□□□ -0.45
IFT20-209ENST00000579419 Q8N9W7 124 aa12.21□□□□□ -0.45
IFT20-209ENST00000579419 OR4D6Q8NGJ1 314 aa12.21□□□□□ -0.45
IFT20-209ENST00000579419 HRASLS5Q96KN8 279 aa12.21□□□□□ -0.45
IFT20-209ENST00000579419 HSPB9Q9BQS6 159 aa12.21□□□□□ -0.45
IFT20-209ENST00000579419 MAGEL2Q9UJ55 1249 aa12.21□□□□□ -0.45
IFT20-209ENST00000579419 HECTD4Q9Y4D8 3996 aa12.2□□□□□ -0.46
IFT20-209ENST00000579419 ODAMA1E959 279 aa12.2□□□□□ -0.46
IFT20-209ENST00000579419 NCBP2LA6PVI3 153 aaKnown RBP12.2□□□□□ -0.46
IFT20-209ENST00000579419 HMGB1P1B2RPK0 211 aaPredicted RBP12.2□□□□□ -0.46
IFT20-209ENST00000579419 H3BN98 237 aa12.2□□□□□ -0.46
IFT20-209ENST00000579419 J3QR06 171 aa12.2□□□□□ -0.46
IFT20-209ENST00000579419 PRODHO43272 600 aa12.2□□□□□ -0.46
IFT20-209ENST00000579419 OR2H2O95918 312 aa12.2□□□□□ -0.46
IFT20-209ENST00000579419 IGHG4P01861 327 aa12.2□□□□□ -0.46
IFT20-209ENST00000579419 PSMB8P28062 276 aa12.2□□□□□ -0.46
IFT20-209ENST00000579419 RIDAP52758 137 aaKnown RBP12.2□□□□□ -0.46
IFT20-209ENST00000579419 ROM1Q03395 351 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms