RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 ZNF488Q96MN9 340 aa9.3□□□□□ -0.92
CDK5RAP3-204ENST00000577664 WDFY2Q96P53 400 aa9.3□□□□□ -0.92
CDK5RAP3-204ENST00000577664 NKX3-1Q99801 234 aaPredicted RBP9.3□□□□□ -0.92
CDK5RAP3-204ENST00000577664 WDR13Q9H1Z4 485 aa9.3□□□□□ -0.92
CDK5RAP3-204ENST00000577664 DCAF16Q9NXF7 216 aa9.3□□□□□ -0.92
CDK5RAP3-204ENST00000577664 NLKQ9UBE8 527 aa9.3□□□□□ -0.92
CDK5RAP3-204ENST00000577664 ZNF222Q9UK12 451 aa9.3□□□□□ -0.92
CDK5RAP3-204ENST00000577664 HSF4Q9ULV5 492 aa9.3□□□□□ -0.92
CDK5RAP3-204ENST00000577664 ST3GAL6Q9Y274 331 aa9.3□□□□□ -0.92
CDK5RAP3-204ENST00000577664 IGKV1D-17A0A075B6S4 117 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 A0A0B4J203 849 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 A0A1W2PP11 408 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 METTL21EPA6NDL7 271 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 OR2AT4A6NND4 320 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 LYNX1G3V0Z9 82 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 RAB27BO00194 218 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 SH2D1BO14796 132 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 WNT9BO14905 357 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 LY6HO94772 140 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 HTR3BO95264 441 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 PLATP00750 562 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 LYNX1P0DP58 116 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 AMY2BP19961 511 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 SERPINA2P20848 420 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 MDH2P40926 338 aaKnown RBP9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 MNDAP41218 407 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 PDLIM4P50479 330 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 TMEM50BP56557 158 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 BTG1P62324 171 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 ZMYND11Q15326 602 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 SIGIRRQ6IA17 410 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 RAB12Q6IQ22 244 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 FIP1L1Q6UN15 594 aaKnown RBP9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 ZNF788Q6ZQV5 615 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 MUC20Q8N307 709 aaPredicted RBP9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 MCFD2Q8NI22 146 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 LGALS14Q8TCE9 139 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 C10orf105Q8TEF2 133 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 SLC25A38Q96DW6 304 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 GAL3ST1Q99999 423 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 SOSTQ9BQB4 213 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 URM1Q9BTM9 101 aaKnown RBP9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 TMEM59Q9BXS4 323 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 TREM2Q9NZC2 230 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 PTTG2Q9NZH5 202 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 RCC2Q9P258 522 aaKnown RBP9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 GLS2Q9UI32 602 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 WIPI2Q9Y4P8 454 aa9.29□□□□□ -0.92
CDK5RAP3-204ENST00000577664 RFPL4AA6NLU0 287 aa9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 POM121CA8CG34 1229 aa9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 RFPL4AL1F8VTS6 287 aa9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 CTDSP2O14595 271 aa9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 GEMIN2O14893 280 aaKnown RBP9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 SSX4O60224 188 aa9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 CRTAPO75718 401 aaPredicted RBP9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 CLPXO76031 633 aa9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 PRKACAP17612 351 aa9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 PRDX2P32119 198 aa9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 EFNB2P52799 333 aa9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 PLA2G7Q13093 441 aa9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 UBE2NLQ5JXB2 153 aa9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 OR10K2Q6IF99 312 aa9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 DCDC5Q6ZRR9 648 aa9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 ZNF561Q8N587 486 aa9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 ZNF525Q8N782 197 aa9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 OR56B1Q8NGI3 324 aa9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 OR10K1Q8NGX5 313 aa9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 EMG1Q92979 244 aaKnown RBP9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 S100A16Q96FQ6 103 aaKnown RBP9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 TIMD4Q96H15 378 aa9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 TMEM246Q9BRR3 403 aa9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 DCUN1D5Q9BTE7 237 aa9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 SELENOIQ9C0D9 397 aa9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 FAM234AQ9H0X4 552 aa9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 MIXL1Q9H2W2 232 aa9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 NCOR1P1Q9H4R4 102 aa9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 BANF2Q9H503 90 aa9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 ELL3Q9HB65 397 aaPredicted RBP9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 SPACA1Q9HBV2 294 aa9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 RHBDL2Q9NX52 303 aa9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 COMMD3Q9UBI1 195 aa9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 RABL2AQ9UBK7 228 aaPredicted RBP9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 RABL2BQ9UNT1 228 aa9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 PEX16Q9Y5Y5 336 aa9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 KMT2CQ8NEZ4 4911 aaKnown RBP9.28□□□□□ -0.92
CDK5RAP3-204ENST00000577664 PRKDCP78527 4128 aaKnown RBP9.27□□□□□ -0.93
CDK5RAP3-204ENST00000577664 A0A0A6YYD4 124 aa9.27□□□□□ -0.93
CDK5RAP3-204ENST00000577664 F5H0A9 414 aaPredicted RBP9.27□□□□□ -0.93
CDK5RAP3-204ENST00000577664 GPR37O15354 613 aa9.27□□□□□ -0.93
CDK5RAP3-204ENST00000577664 XRCC3O43542 346 aa9.27□□□□□ -0.93
CDK5RAP3-204ENST00000577664 ZNF737O75373 536 aa9.27□□□□□ -0.93
CDK5RAP3-204ENST00000577664 CA11O75493 328 aa9.27□□□□□ -0.93
CDK5RAP3-204ENST00000577664 MPIG6BO95866 241 aa9.27□□□□□ -0.93
CDK5RAP3-204ENST00000577664 CSN2P05814 226 aa9.27□□□□□ -0.93
CDK5RAP3-204ENST00000577664 MELTFP08582 738 aa9.27□□□□□ -0.93
CDK5RAP3-204ENST00000577664 WNT2P09544 360 aa9.27□□□□□ -0.93
CDK5RAP3-204ENST00000577664 FUT3P21217 361 aa9.27□□□□□ -0.93
CDK5RAP3-204ENST00000577664 ETV6P41212 452 aa9.27□□□□□ -0.93
CDK5RAP3-204ENST00000577664 NR4A2P43354 598 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms