RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 SLC7A11Q9UPY5 501 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 EML6Q6ZMW3 1958 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 TMEM218A2RU14 115 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 H7C2Y5 167 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 SLC33A1O00400 549 aaPredicted RBP4.64□□□□□ -1.67
VAPA-203ENST00000577539 ABCD4O14678 606 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 LAMTOR5O43504 91 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 XRCC2O43543 280 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 FGF5P12034 268 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 CCL1P22362 96 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 RBP2P50120 134 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 DUSP3P51452 185 aaPredicted RBP4.64□□□□□ -1.67
VAPA-203ENST00000577539 PIGPP57054 158 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 EIF5AP63241 154 aaKnown RBP4.64□□□□□ -1.67
VAPA-203ENST00000577539 TCF15Q12870 199 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 HIST3H3Q16695 136 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 AADACL3Q5VUY0 350 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 PMS2CLQ68D20 193 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 EIF5AL1Q6IS14 154 aaKnown RBP4.64□□□□□ -1.67
VAPA-203ENST00000577539 PLXDC2Q6UX71 529 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 SPAG16Q8N0X2 631 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 OR5L1Q8NGL2 311 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 OR1F12Q8NHA8 337 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 MRPL24Q96A35 216 aaKnown RBP4.64□□□□□ -1.67
VAPA-203ENST00000577539 SLC26A1Q9H2B4 701 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 NCOR1P1Q9H4R4 102 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 WDR54Q9H977 334 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 TAF9BQ9HBM6 251 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.64□□□□□ -1.67
VAPA-203ENST00000577539 GLRX2Q9NS18 164 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 PILRBQ9UKJ0 227 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 OSGIN2Q9Y236 505 aa4.64□□□□□ -1.67
VAPA-203ENST00000577539 A0A0U1RQV5 110 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 FAM90A20PA6NIJ5 464 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 GEMIN2O14893 280 aaKnown RBP4.63□□□□□ -1.67
VAPA-203ENST00000577539 KLF7O75840 302 aaPredicted RBP4.63□□□□□ -1.67
VAPA-203ENST00000577539 ACTL6AO96019 429 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 NRASP01111 189 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 ZNF728P0DKX0 622 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 PVALBP20472 110 aaPredicted RBP4.63□□□□□ -1.67
VAPA-203ENST00000577539 RPL12P30050 165 aaKnown RBP4.63□□□□□ -1.67
VAPA-203ENST00000577539 FCGR2CP31995 323 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 HERV-K104P61576 105 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 SRSF3P84103 164 aaKnown RBP4.63□□□□□ -1.67
VAPA-203ENST00000577539 H3F3AP84243 136 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 SRSF4Q08170 494 aaKnown RBP4.63□□□□□ -1.67
VAPA-203ENST00000577539 RSPO1Q2MKA7 263 aaPredicted RBP4.63□□□□□ -1.67
VAPA-203ENST00000577539 PIGYQ3MUY2 71 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 SPIN3Q5JUX0 258 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 OR2A2Q6IF42 318 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 PUSL1Q8N0Z8 303 aaKnown RBP4.63□□□□□ -1.67
VAPA-203ENST00000577539 SVBPQ8N300 66 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 EIF4E3Q8N5X7 224 aaKnown RBP4.63□□□□□ -1.67
VAPA-203ENST00000577539 ZIC4Q8N9L1 334 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 RNF138Q8WVD3 245 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 NABP1Q96AH0 204 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 PRRG4Q9BZD6 226 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 WNT5BQ9H1J7 359 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 AK3Q9UIJ7 227 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 DBX1A6NMT0 343 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 HSPB6O14558 160 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 ATG12O94817 140 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 PRH1P02810 166 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 RFPL3SP0C7P2 107 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 GLP1RP43220 463 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 ZNF133P52736 654 aaPredicted RBP4.63□□□□□ -1.67
VAPA-203ENST00000577539 MLF1P58340 268 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 RAC3P60763 192 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 MRPS34P82930 218 aaKnown RBP4.63□□□□□ -1.67
VAPA-203ENST00000577539 ZNF616Q08AN1 781 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 RBM39Q14498 530 aaKnown RBP4.63□□□□□ -1.67
VAPA-203ENST00000577539 RAB35Q15286 201 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 C10orf128Q5T292 105 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 FAM27BQ5VT28 67 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 GGNBP1Q5YKI7 109 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 CBLN2Q8IUK8 224 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 TMEM123Q8N131 208 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 FAM89BQ8N5H3 189 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 OR10D3Q8NH80 312 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 ABHD3Q8WU67 409 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 TMEM54Q969K7 222 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 ANXA10Q9UJ72 324 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 ST3GAL6Q9Y274 331 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 LOC102725191A0A1B0GVB3 256 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 DNASE2O00115 360 aaPredicted RBP4.63□□□□□ -1.67
VAPA-203ENST00000577539 BET1O15155 118 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 CD63P08962 238 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 CCL2P13500 99 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 SELLP14151 372 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 ITGA3P26006 1051 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 CD80P33681 288 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 FAM76BQ5HYJ3 339 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 SLC25A26Q70HW3 274 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 LHFPL1Q86WI0 220 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 RTN4IP1Q8WWV3 396 aaPredicted RBP4.63□□□□□ -1.67
VAPA-203ENST00000577539 SULT4A1Q9BR01 284 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 OR51B6Q9H340 312 aa4.63□□□□□ -1.67
VAPA-203ENST00000577539 BARX1Q9HBU1 254 aaPredicted RBP4.63□□□□□ -1.67
VAPA-203ENST00000577539 MBNL3Q9NUK0 354 aaKnown RBP4.63□□□□□ -1.67
VAPA-203ENST00000577539 ZNF407Q9C0G0 2248 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms