RNA–Protein interactions for RNA: ENST00000574855.1

NUP88-209, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-209ENST00000574855 DDX60LQ5H9U9 1706 aaKnown RBP2.67□□□□□ -1.98
NUP88-209ENST00000574855 BAZ2BQ9UIF8 2168 aaKnown RBP2.67□□□□□ -1.98
NUP88-209ENST00000574855 ASTN1O14525 1302 aa2.67□□□□□ -1.98
NUP88-209ENST00000574855 NFASCO94856 1347 aa2.67□□□□□ -1.98
NUP88-209ENST00000574855 ECM29Q5VYK3 1845 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 SBF2Q86WG5 1849 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 LRRC37AA6NMS7 1700 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 QSER1Q2KHR3 1735 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 LOC100131303A0A0U1RQF7 123 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 DAPL1A0PJW8 107 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 OR6C6A6NF89 314 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 IGLON5A6NGN9 336 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 DHRS7CA6NNS2 312 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 ANKRD65E5RJM6 399 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 F6UB75 175 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 BET1O15155 118 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 UGT2B11O75310 529 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 RP2O75695 350 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 CNMDO75829 334 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 SEC24AO95486 1093 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 DUS4LO95620 317 aaKnown RBP2.66□□□□□ -1.98
NUP88-209ENST00000574855 SLC25A27O95847 323 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 CYB5R3P00387 301 aaPredicted RBP2.66□□□□□ -1.98
NUP88-209ENST00000574855 APOC1P02654 83 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 SLC2A2P11168 524 aaPredicted RBP2.66□□□□□ -1.98
NUP88-209ENST00000574855 GZMHP20718 246 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 IGFBP5P24593 272 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 SHC1P29353 583 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 GPR183P32249 361 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 GCKP35557 465 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 GPX4P36969 197 aaPredicted RBP2.66□□□□□ -1.98
NUP88-209ENST00000574855 CSRP3P50461 194 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 GPM6AP51674 278 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 CDKN2DP55273 166 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 AP1S2P56377 157 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 RAB38P57729 211 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 ARG2P78540 354 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 CAV1Q03135 178 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 FMODQ06828 376 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 CLINT1Q14677 625 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 IRF4Q15306 451 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 SNRNP35Q16560 246 aaKnown RBP2.66□□□□□ -1.98
NUP88-209ENST00000574855 CYP51A1Q16850 503 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 SLC25A35Q3KQZ1 300 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 ARHGAP11BQ3KRB8 267 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 TMEM97Q5BJF2 176 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 ZNF57Q68EA5 555 aaPredicted RBP2.66□□□□□ -1.98
NUP88-209ENST00000574855 SPINK14Q6IE38 97 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 ZNF774Q6NX45 483 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 WDR74Q6RFH5 385 aaPredicted RBP2.66□□□□□ -1.98
NUP88-209ENST00000574855 APOOLQ6UXV4 268 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 TFAP2EQ6VUC0 442 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 Q6ZVH6 145 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 GLT6D1Q7Z4J2 308 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 PTAR1Q7Z6K3 402 aaPredicted RBP2.66□□□□□ -1.98
NUP88-209ENST00000574855 TMEM135Q86UB9 458 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 COMMD7Q86VX2 200 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 GPD1LQ8N335 351 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 PNKDQ8N490 385 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 STX19Q8N4C7 294 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 ZNF676Q8N7Q3 588 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 ARIH2OSQ8N7S6 290 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 PRSS33Q8NF86 280 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 SLC26A10Q8NG04 563 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 OR2Z1Q8NG97 314 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 OR4D10Q8NGI6 311 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 COQ8AQ8NI60 647 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 RNASE11Q8TAA1 199 aaKnown RBP2.66□□□□□ -1.98
NUP88-209ENST00000574855 STOML3Q8TAV4 291 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 Q8WTZ3 238 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 KCTD4Q8WVF5 259 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 YIPF5Q969M3 257 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 DDIT4LQ96D03 193 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 SLC25A38Q96DW6 304 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 TMEM80Q96HE8 168 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 OLFM3Q96PB7 478 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 ALKBH3Q96Q83 286 aaPredicted RBP2.66□□□□□ -1.98
NUP88-209ENST00000574855 PSMB7Q99436 277 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 MCHR1Q99705 422 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 MED18Q9BUE0 208 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 MIXL1Q9H2W2 232 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 OR51J1Q9H342 316 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 OR51I1Q9H343 314 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 RNF167Q9H6Y7 350 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 DDIT4Q9NX09 232 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 GSKIPQ9P0R6 139 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 KLK11Q9UBX7 282 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 OR52A1Q9UKL2 312 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 COQ4Q9Y3A0 265 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 SNX10Q9Y5X0 201 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 NUBP2Q9Y5Y2 271 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 PHF3Q92576 2039 aaKnown RBP2.66□□□□□ -1.98
NUP88-209ENST00000574855 IGSF9BQ9UPX0 1349 aa2.66□□□□□ -1.98
NUP88-209ENST00000574855 NRXN2Q9P2S2 1712 aa2.65□□□□□ -1.98
NUP88-209ENST00000574855 C2orf16Q68DN1 1984 aa2.65□□□□□ -1.98
NUP88-209ENST00000574855 A0A087WUJ7 227 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 IGHV2OR16-5A0A0B4J2B6 119 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 FAM240AA0A1B0GVK7 77 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 A0A1B0GWB2 263 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 RFPL4AA6NLU0 287 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms