RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 SMAD4Q13485 552 aaKnown RBP8.4□□□□□ -1.07
CCDC40-212ENST00000574799 ARSJQ5FYB0 599 aaPredicted RBP8.4□□□□□ -1.07
CCDC40-212ENST00000574799 KIAA0895LQ68EN5 471 aa8.4□□□□□ -1.07
CCDC40-212ENST00000574799 FDX2Q6P4F2 183 aa8.4□□□□□ -1.07
CCDC40-212ENST00000574799 C6orf201Q7Z4U5 140 aa8.4□□□□□ -1.07
CCDC40-212ENST00000574799 C17orf82Q86X59 251 aaPredicted RBP8.4□□□□□ -1.07
CCDC40-212ENST00000574799 OR4X1Q8NH49 305 aa8.4□□□□□ -1.07
CCDC40-212ENST00000574799 NEK7Q8TDX7 302 aa8.4□□□□□ -1.07
CCDC40-212ENST00000574799 TSLPQ969D9 159 aa8.4□□□□□ -1.07
CCDC40-212ENST00000574799 PIGTQ969N2 578 aa8.4□□□□□ -1.07
CCDC40-212ENST00000574799 GNPNAT1Q96EK6 184 aaPredicted RBP8.4□□□□□ -1.07
CCDC40-212ENST00000574799 TBX15Q96SF7 602 aa8.4□□□□□ -1.07
CCDC40-212ENST00000574799 GINS3Q9BRX5 216 aa8.4□□□□□ -1.07
CCDC40-212ENST00000574799 TXNIPQ9H3M7 391 aa8.4□□□□□ -1.07
CCDC40-212ENST00000574799 MED29Q9NX70 200 aa8.4□□□□□ -1.07
CCDC40-212ENST00000574799 CBY3A6NI87 242 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 M0QZK8 103 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 GGCTO75223 188 aaKnown RBP8.39□□□□□ -1.07
CCDC40-212ENST00000574799 RAD51DO75771 328 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 OR4A8P0C604 315 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 LYL1P12980 280 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 IGFBP3P17936 291 aaPredicted RBP8.39□□□□□ -1.07
CCDC40-212ENST00000574799 CCR5P51681 352 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 ERVFC1-1P60608 527 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 BTNL3Q6UXE8 466 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 NPSR1Q6W5P4 371 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 IL22RA1Q8N6P7 574 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 SDSLQ96GA7 329 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 SPIN2AQ99865 258 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 SPIN2BQ9BPZ2 258 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 PAM16Q9Y3D7 125 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 A0A1W2PPC4 97 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 C17orf105B2RV13 164 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 B4DEV8 164 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 H3BML4 177 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 AQP7O14520 342 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 LDLRAD4O15165 306 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 HSPB1P04792 205 aaKnown RBP8.39□□□□□ -1.07
CCDC40-212ENST00000574799 PNLIPP16233 465 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 GALR1P47211 349 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 CSNK1A1P48729 337 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 SUCLG1P53597 346 aaKnown RBP8.39□□□□□ -1.07
CCDC40-212ENST00000574799 TLE3Q04726 772 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 SPEM2Q0P670 501 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 C1orf61Q13536 156 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 SYT13Q7L8C5 426 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 CCDC71LQ8N9Z2 235 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 OR52M1Q8NGK5 317 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 SOHLH2Q9NX45 425 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 F5H5K5 113 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 BCAT2O15382 392 aaPredicted RBP8.39□□□□□ -1.07
CCDC40-212ENST00000574799 CYB5R3P00387 301 aaPredicted RBP8.39□□□□□ -1.07
CCDC40-212ENST00000574799 METTL15P1P0C7V9 234 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 THBS4P35443 961 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 ECI1P42126 302 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 PTTG1IPP53801 180 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 ROM1Q03395 351 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 DMWDQ09019 674 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 PNRC1Q12796 327 aaPredicted RBP8.39□□□□□ -1.07
CCDC40-212ENST00000574799 IL13RA2Q14627 380 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 VSTM2LQ96N03 204 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 HDHD3Q9BSH5 251 aaPredicted RBP8.39□□□□□ -1.07
CCDC40-212ENST00000574799 SAMD10Q9BYL1 202 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 SRPK3Q9UPE1 567 aa8.39□□□□□ -1.07
CCDC40-212ENST00000574799 WIPF3A6NGB9 483 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 TRAPPC6AO75865 159 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 OPN1LWP04000 364 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 OR1D4P47884 311 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 RRADP55042 308 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 CFHR1Q03591 330 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 CARFQ8N187 725 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 C11orf42Q8N5U0 333 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 SLC38A9Q8NBW4 561 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 ADAMTS9Q9P2N4 1935 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 TMED7-TICAM2A0A0A6YYA0 188 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 C20orf202A1L168 122 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 MASP2O00187 686 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 CTSDP07339 412 aaPredicted RBP8.38□□□□□ -1.07
CCDC40-212ENST00000574799 FGF5P12034 268 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 RABIFP47224 123 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 ELLP55199 621 aaPredicted RBP8.38□□□□□ -1.07
CCDC40-212ENST00000574799 CLRN1P58418 232 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 RPS18P62269 152 aaKnown RBP8.38□□□□□ -1.07
CCDC40-212ENST00000574799 HSD11B2P80365 405 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 ZNF117Q03924 483 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 EGR4Q05215 589 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 CDCP2Q5VXM1 449 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 ADAMTS18Q8TE60 1221 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 CCDC74BQ96LY2 380 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 FAAP24Q9BTP7 215 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 NAA60Q9H7X0 242 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 OSGIN2Q9Y236 505 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 K7N7A8 449 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 TTRP02766 147 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 TK1P04183 234 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 SLC6A8P48029 635 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 ZNF92Q03936 586 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 P2RY6Q15077 328 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 SGCBQ16585 318 aa8.38□□□□□ -1.07
CCDC40-212ENST00000574799 PLK3Q9H4B4 646 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms