RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 SSX1Q16384 188 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 KIF26BQ2KJY2 2108 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 ZNF404Q494X3 552 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 YIF1BQ5BJH7 314 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 CLLU1OSQ5K130 101 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 LCE1DQ5T752 114 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 ZNF774Q6NX45 483 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 PPP1R2P3Q6NXS1 205 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 XKRXQ6PP77 449 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 SPNS3Q6ZMD2 512 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 Q6ZR54 194 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 SLC16A13Q7RTY0 426 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 PRNTQ86SH4 94 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 LINC00596Q86U02 117 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 TRAPPC5Q8IUR0 188 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 ZNF584Q8IVC4 421 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 CPNE9Q8IYJ1 553 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 ZFP82Q8N141 532 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 TMEM256Q8N2U0 113 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 MUC15Q8N387 334 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 C11orf42Q8N5U0 333 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 LINC00337Q8N6G1 96 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 OR2M7Q8NG81 312 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 OR8K1Q8NGG5 319 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 OR5D18Q8NGL1 313 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 OR5W2Q8NH69 310 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 OR1L1Q8NH94 360 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 HAVCR2Q8TDQ0 301 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 DTD1Q8TEA8 209 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 SLC37A2Q8TED4 501 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 CYGBQ8WWM9 190 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 CCL17Q92583 94 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 RAB8BQ92930 207 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 PPCDCQ96CD2 204 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 ZNF382Q96SR6 550 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 STACQ99469 402 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 CDCA4Q9BXL8 241 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 TBL1XR1Q9BZK7 514 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 TSGA10Q9BZW7 698 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 MS4A6AQ9H2W1 248 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 MAP1LC3AQ9H492 121 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 RPP21Q9H633 154 aaKnown RBP1.44□□□□□ -2.18
CHD3-217ENST00000574022 ASB7Q9H672 318 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 C12orf10Q9HB07 376 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 WFDC1Q9HC57 220 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 SLC22A13Q9Y226 551 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.44□□□□□ -2.18
CHD3-217ENST00000574022 LRRC42Q9Y546 428 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 WSB1Q9Y6I7 421 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 EVC2Q86UK5 1308 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 LOC102724200A0A096LPH7 203 aaPredicted RBP1.43□□□□□ -2.18
CHD3-217ENST00000574022 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.43□□□□□ -2.18
CHD3-217ENST00000574022 IGHV2-26A0A0B4J1V2 119 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 IGHV3-72A0A0B4J1Y9 119 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 IGKV6-21A0A0C4DH24 114 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 A0A1W2PQL4 384 aaPredicted RBP1.43□□□□□ -2.18
CHD3-217ENST00000574022 MYBPHLA2RUH7 354 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 C5orf63A6NC05 138 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 CD300LBA8K4G0 201 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 C8orf87E5RJ46 101 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 H0YJW9 148 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 SOCS1O15524 211 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 PLIN3O60664 434 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 FOXH1O75593 365 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 DCTN3O75935 186 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 OR2A4O95047 310 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 OR5F1O95221 314 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 CA2P00918 260 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 OR56A5P0C7T3 313 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 CECR9P0C854 216 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 PSG2P11465 335 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 ZNF17P17021 662 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 ME2P23368 584 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 MT3P25713 68 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 EVI2BP34910 448 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 CD79BP40259 229 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 ESRRGP62508 458 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 MRPS25P82663 173 aaKnown RBP1.43□□□□□ -2.18
CHD3-217ENST00000574022 PSG7Q13046 419 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 SKP2Q13309 424 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 PPP1R1AQ13522 171 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 PAFAH1B3Q15102 231 aaKnown RBP1.43□□□□□ -2.18
CHD3-217ENST00000574022 LRRC26Q2I0M4 334 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 NXNL2Q5VZ03 156 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 SPOPLQ6IQ16 392 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 FBXL22Q6P050 247 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 FAM173BQ6P4H8 233 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 TNFAIP8L2Q6P589 184 aaPredicted RBP1.43□□□□□ -2.18
CHD3-217ENST00000574022 OLIG3Q7RTU3 272 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 GALNT10Q86SR1 603 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 STK40Q8N2I9 435 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 C15orf56Q8N910 161 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 LINC01555Q8NAE3 123 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 GATD1Q8NB37 220 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 TTLQ8NG68 377 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 OR4K5Q8NGD3 323 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 OR5M1Q8NGP8 315 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 SRSF12Q8WXF0 261 aaKnown RBP1.43□□□□□ -2.18
CHD3-217ENST00000574022 ASB13Q8WXK3 278 aa1.43□□□□□ -2.18
CHD3-217ENST00000574022 TLCD1Q96CP7 247 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms