RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 CIB1Q99828 191 aa7.41□□□□□ -1.22
NPLOC4-210ENST00000572824 CITED2Q99967 270 aaPredicted RBP7.41□□□□□ -1.22
NPLOC4-210ENST00000572824 C1orf21Q9H246 121 aa7.41□□□□□ -1.22
NPLOC4-210ENST00000572824 ABCB9Q9NP78 766 aa7.41□□□□□ -1.22
NPLOC4-210ENST00000572824 KRT84Q9NSB2 600 aa7.41□□□□□ -1.22
NPLOC4-210ENST00000572824 CAB39Q9Y376 341 aaPredicted RBP7.41□□□□□ -1.22
NPLOC4-210ENST00000572824 HILPDAQ9Y5L2 63 aa7.41□□□□□ -1.22
NPLOC4-210ENST00000572824 COL7A1Q02388 2944 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 IGKV1-12A0A0C4DH73 117 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 LOC107986453A0A1B0GWG9 222 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 UBE2QL1A1L167 161 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 A6NDX4 124 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 FAM90A8PA6NJQ4 464 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 SAC3D1A6NKF1 404 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 C17orf98A8MV24 154 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 K7N7A8 449 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 SLC1A7O00341 560 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 GYG2O15488 501 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 IGKV1D-12P01611 117 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 OPN1MWP04001 364 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 OPN1MW2P0DN77 364 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 OPN1MW3P0DN78 364 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 BCL3P20749 454 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 CCL1P22362 96 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 KIR2DS4P43632 304 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 POU3F4P49335 361 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 NANOS3P60323 173 aaKnown RBP7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 ZNF85Q03923 595 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 BLMHQ13867 455 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 GK3PQ14409 553 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 ATP6AP1Q15904 470 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 PRAMEF5Q5TYX0 476 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 KDM4DQ6B0I6 523 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 DEGS2Q6QHC5 323 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 Q6ZTK2 550 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 SLC25A26Q70HW3 274 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 ZNF561Q8N587 486 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 YIPF7Q8N8F6 280 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 OR10H4Q8NGA5 316 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 OR4S1Q8NGB4 309 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 OR51A4Q8NGJ6 313 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 OR5D13Q8NGL4 314 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 ZNF671Q8TAW3 534 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 ADAT3Q96EY9 351 aaPredicted RBP7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 CYYR1Q96J86 154 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 C20orf173Q96LM9 149 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 CLN6Q9NWW5 311 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 USE1Q9NZ43 259 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 TCF19Q9Y242 345 aa7.4□□□□□ -1.22
NPLOC4-210ENST00000572824 NBEAL2Q6ZNJ1 2754 aa7.39□□□□□ -1.23
NPLOC4-210ENST00000572824 ACOD1A6NK06 481 aa7.39□□□□□ -1.23
NPLOC4-210ENST00000572824 ZNF670-ZNF695F2Z2N8 137 aa7.39□□□□□ -1.23
NPLOC4-210ENST00000572824 SIRPB1O00241 398 aa7.39□□□□□ -1.23
NPLOC4-210ENST00000572824 DLGAP1O14490 977 aa7.39□□□□□ -1.23
NPLOC4-210ENST00000572824 NOS1APO75052 506 aaPredicted RBP7.39□□□□□ -1.23
NPLOC4-210ENST00000572824 ZNF254O75437 659 aa7.39□□□□□ -1.23
NPLOC4-210ENST00000572824 IGHV1-8P0DP01 117 aa7.39□□□□□ -1.23
NPLOC4-210ENST00000572824 RPS19P39019 145 aaKnown RBP7.39□□□□□ -1.23
NPLOC4-210ENST00000572824 OR3A1P47881 315 aa7.39□□□□□ -1.23
NPLOC4-210ENST00000572824 SNCBQ16143 134 aa7.39□□□□□ -1.23
NPLOC4-210ENST00000572824 TCTEX1D4Q5JR98 221 aa7.39□□□□□ -1.23
NPLOC4-210ENST00000572824 KPRPQ5T749 579 aaPredicted RBP7.39□□□□□ -1.23
NPLOC4-210ENST00000572824 NXNL2Q5VZ03 156 aa7.39□□□□□ -1.23
NPLOC4-210ENST00000572824 ZNF626Q68DY1 528 aa7.39□□□□□ -1.23
NPLOC4-210ENST00000572824 Q6ZSR3 168 aa7.39□□□□□ -1.23
NPLOC4-210ENST00000572824 ZNF573Q86YE8 665 aa7.39□□□□□ -1.23
NPLOC4-210ENST00000572824 OR5D18Q8NGL1 313 aa7.39□□□□□ -1.23
NPLOC4-210ENST00000572824 OR2T6Q8NHC8 308 aa7.39□□□□□ -1.23
NPLOC4-210ENST00000572824 ASB17Q8WXJ9 295 aa7.39□□□□□ -1.23
NPLOC4-210ENST00000572824 GABARAPL1Q9H0R8 117 aa7.39□□□□□ -1.23
NPLOC4-210ENST00000572824 RIBC2Q9H4K1 309 aa7.39□□□□□ -1.23
NPLOC4-210ENST00000572824 RASL12Q9NYN1 266 aa7.39□□□□□ -1.23
NPLOC4-210ENST00000572824 ZNF581Q9P0T4 197 aa7.39□□□□□ -1.23
NPLOC4-210ENST00000572824 SNX5Q9Y5X3 404 aa7.39□□□□□ -1.23
NPLOC4-210ENST00000572824 SYT7O43581 403 aa7.38□□□□□ -1.23
NPLOC4-210ENST00000572824 HAND1O96004 215 aa7.38□□□□□ -1.23
NPLOC4-210ENST00000572824 ZNF728P0DKX0 622 aa7.38□□□□□ -1.23
NPLOC4-210ENST00000572824 ATP6V1B1P15313 513 aa7.38□□□□□ -1.23
NPLOC4-210ENST00000572824 ISL1P61371 349 aa7.38□□□□□ -1.23
NPLOC4-210ENST00000572824 ACTA2P62736 377 aa7.38□□□□□ -1.23
NPLOC4-210ENST00000572824 ACTG2P63267 376 aa7.38□□□□□ -1.23
NPLOC4-210ENST00000572824 ACTC1P68032 377 aa7.38□□□□□ -1.23
NPLOC4-210ENST00000572824 ACTA1P68133 377 aa7.38□□□□□ -1.23
NPLOC4-210ENST00000572824 ZNF91Q05481 1191 aa7.38□□□□□ -1.23
NPLOC4-210ENST00000572824 IL24Q13007 206 aa7.38□□□□□ -1.23
NPLOC4-210ENST00000572824 DYNC1I2Q13409 638 aaKnown RBP7.38□□□□□ -1.23
NPLOC4-210ENST00000572824 OR8H2Q8N162 312 aa7.38□□□□□ -1.23
NPLOC4-210ENST00000572824 OR4P4Q8NGL7 312 aa7.38□□□□□ -1.23
NPLOC4-210ENST00000572824 BCAS4Q8TDM0 211 aa7.38□□□□□ -1.23
NPLOC4-210ENST00000572824 EMG1Q92979 244 aaKnown RBP7.38□□□□□ -1.23
NPLOC4-210ENST00000572824 EME1Q96AY2 570 aa7.38□□□□□ -1.23
NPLOC4-210ENST00000572824 PHF21AQ96BD5 680 aa7.38□□□□□ -1.23
NPLOC4-210ENST00000572824 CEP19Q96LK0 163 aa7.38□□□□□ -1.23
NPLOC4-210ENST00000572824 PKIBQ9C010 78 aa7.38□□□□□ -1.23
NPLOC4-210ENST00000572824 NPFFR1Q9GZQ6 430 aa7.38□□□□□ -1.23
NPLOC4-210ENST00000572824 CHST5Q9GZS9 411 aa7.38□□□□□ -1.23
NPLOC4-210ENST00000572824 HEXA-AS1Q9H8Q6 139 aa7.38□□□□□ -1.23
NPLOC4-210ENST00000572824 MOB1AQ9H8S9 216 aa7.38□□□□□ -1.23
NPLOC4-210ENST00000572824 AURKAIP1Q9NWT8 199 aaPredicted RBP7.38□□□□□ -1.23
NPLOC4-210ENST00000572824 GNG8Q9UK08 70 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms