RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 RPS10P5Q9NQ39 176 aa14.07□□□□□ -0.16
RAB40B-206ENST00000571995 LIPGQ9Y5X9 500 aa14.07□□□□□ -0.16
RAB40B-206ENST00000571995 KLK10O43240 276 aa14.06□□□□□ -0.16
RAB40B-206ENST00000571995 ERVS71-1P61550 626 aa14.06□□□□□ -0.16
RAB40B-206ENST00000571995 ZNF239Q16600 458 aaKnown RBP14.06□□□□□ -0.16
RAB40B-206ENST00000571995 FAM27BQ5VT28 67 aa14.06□□□□□ -0.16
RAB40B-206ENST00000571995 KLF13Q9Y2Y9 288 aaPredicted RBP14.06□□□□□ -0.16
RAB40B-206ENST00000571995 LINC00862A6NCI5 91 aa14.06□□□□□ -0.16
RAB40B-206ENST00000571995 HPP00738 406 aa14.06□□□□□ -0.16
RAB40B-206ENST00000571995 OR13C7P0DN81 318 aa14.06□□□□□ -0.16
RAB40B-206ENST00000571995 Q6ZRG5 221 aa14.06□□□□□ -0.16
RAB40B-206ENST00000571995 ZNF826PQ6ZT77 177 aa14.06□□□□□ -0.16
RAB40B-206ENST00000571995 CBLN2Q8IUK8 224 aa14.06□□□□□ -0.16
RAB40B-206ENST00000571995 H7C2Y5 167 aa14.06□□□□□ -0.16
RAB40B-206ENST00000571995 FKBP2P26885 142 aaKnown RBP14.06□□□□□ -0.16
RAB40B-206ENST00000571995 GCH1P30793 250 aa14.06□□□□□ -0.16
RAB40B-206ENST00000571995 CALCRP30988 508 aa14.06□□□□□ -0.16
RAB40B-206ENST00000571995 SCAND1P57086 179 aa14.06□□□□□ -0.16
RAB40B-206ENST00000571995 ACTBL2Q562R1 376 aa14.06□□□□□ -0.16
RAB40B-206ENST00000571995 TMEM182Q6ZP80 229 aaPredicted RBP14.06□□□□□ -0.16
RAB40B-206ENST00000571995 TMEM178AQ8NBL3 297 aa14.06□□□□□ -0.16
RAB40B-206ENST00000571995 HMGB3O15347 200 aaKnown RBP14.05□□□□□ -0.16
RAB40B-206ENST00000571995 AADACP22760 399 aa14.05□□□□□ -0.16
RAB40B-206ENST00000571995 OR8G2PQ6IF36 304 aa14.05□□□□□ -0.16
RAB40B-206ENST00000571995 ZDHHC22Q8N966 263 aa14.05□□□□□ -0.16
RAB40B-206ENST00000571995 CPEB3Q8NE35 698 aaKnown RBP14.05□□□□□ -0.16
RAB40B-206ENST00000571995 C2orf50Q96LR7 162 aa14.05□□□□□ -0.16
RAB40B-206ENST00000571995 ERRFI1Q9UJM3 462 aaPredicted RBP14.05□□□□□ -0.16
RAB40B-206ENST00000571995 DOPEY2Q9Y3R5 2298 aa14.05□□□□□ -0.16
RAB40B-206ENST00000571995 BORCS7-ASMTA0A0B4J1R7 106 aa14.05□□□□□ -0.16
RAB40B-206ENST00000571995 HMSDA8MTL9 139 aa14.05□□□□□ -0.16
RAB40B-206ENST00000571995 SERPINE3A8MV23 424 aa14.05□□□□□ -0.16
RAB40B-206ENST00000571995 PTAFRP25105 342 aa14.05□□□□□ -0.16
RAB40B-206ENST00000571995 FAM166AQ6J272 317 aa14.05□□□□□ -0.16
RAB40B-206ENST00000571995 OR10V1Q8NGI7 309 aa14.05□□□□□ -0.16
RAB40B-206ENST00000571995 SDSLQ96GA7 329 aa14.05□□□□□ -0.16
RAB40B-206ENST00000571995 OR2J1Q9GZK6 312 aa14.05□□□□□ -0.16
RAB40B-206ENST00000571995 WNT5BQ9H1J7 359 aa14.05□□□□□ -0.16
RAB40B-206ENST00000571995 PUS1Q9Y606 427 aaKnown RBP eCLIP14.05□□□□□ -0.16
RAB40B-206ENST00000571995 CD300LBA8K4G0 201 aa14.05□□□□□ -0.16
RAB40B-206ENST00000571995 ZNF17P17021 662 aa14.05□□□□□ -0.16
RAB40B-206ENST00000571995 FUT3P21217 361 aa14.05□□□□□ -0.16
RAB40B-206ENST00000571995 FPR2P25090 351 aa14.05□□□□□ -0.16
RAB40B-206ENST00000571995 PTGER4P35408 488 aa14.05□□□□□ -0.16
RAB40B-206ENST00000571995 NHLRC3Q5JS37 347 aa14.05□□□□□ -0.16
RAB40B-206ENST00000571995 SLC25A32Q9H2D1 315 aa14.05□□□□□ -0.16
RAB40B-206ENST00000571995 FBXL17Q9UF56 701 aa14.05□□□□□ -0.16
RAB40B-206ENST00000571995 S100A6P06703 90 aa14.04□□□□□ -0.16
RAB40B-206ENST00000571995 DAOP14920 347 aa14.04□□□□□ -0.16
RAB40B-206ENST00000571995 FHITP49789 147 aa14.04□□□□□ -0.16
RAB40B-206ENST00000571995 POLR2GP62487 172 aaKnown RBP eCLIP14.04□□□□□ -0.16
RAB40B-206ENST00000571995 SMUG1Q53HV7 270 aa14.04□□□□□ -0.16
RAB40B-206ENST00000571995 FADS6Q8N9I5 356 aa14.04□□□□□ -0.16
RAB40B-206ENST00000571995 SLC30A7Q8NEW0 376 aa14.04□□□□□ -0.16
RAB40B-206ENST00000571995 OIT3Q8WWZ8 545 aa14.04□□□□□ -0.16
RAB40B-206ENST00000571995 NANOS1Q8WY41 292 aaKnown RBP14.04□□□□□ -0.16
RAB40B-206ENST00000571995 DMRTA2Q96SC8 542 aa14.04□□□□□ -0.16
RAB40B-206ENST00000571995 DHRS9Q9BPW9 319 aa14.04□□□□□ -0.16
RAB40B-206ENST00000571995 TNFSF18Q9UNG2 199 aa14.04□□□□□ -0.16
RAB40B-206ENST00000571995 ASPMQ8IZT6 3477 aa14.04□□□□□ -0.16
RAB40B-206ENST00000571995 SCTP09683 121 aa14.04□□□□□ -0.16
RAB40B-206ENST00000571995 P2RY4P51582 365 aa14.04□□□□□ -0.16
RAB40B-206ENST00000571995 FUT6P51993 359 aa14.04□□□□□ -0.16
RAB40B-206ENST00000571995 ARL6IP1Q15041 203 aa14.04□□□□□ -0.16
RAB40B-206ENST00000571995 HOGA1Q86XE5 327 aa14.04□□□□□ -0.16
RAB40B-206ENST00000571995 RNF141Q8WVD5 230 aa14.04□□□□□ -0.16
RAB40B-206ENST00000571995 OCSTAMPQ9BR26 566 aa14.04□□□□□ -0.16
RAB40B-206ENST00000571995 PTPRQQ9UMZ3 2332 aa14.04□□□□□ -0.16
RAB40B-206ENST00000571995 FAM24AA6NFZ4 105 aa14.04□□□□□ -0.16
RAB40B-206ENST00000571995 ZNF133P52736 654 aaPredicted RBP14.04□□□□□ -0.16
RAB40B-206ENST00000571995 ZFP36L1Q07352 338 aaKnown RBP14.04□□□□□ -0.16
RAB40B-206ENST00000571995 PDZK1IP1Q13113 114 aa14.04□□□□□ -0.16
RAB40B-206ENST00000571995 LHFPL2Q6ZUX7 228 aa14.04□□□□□ -0.16
RAB40B-206ENST00000571995 ZNF552Q9H707 407 aaPredicted RBP14.04□□□□□ -0.16
RAB40B-206ENST00000571995 KRBOX1C9JBD0 128 aa14.03□□□□□ -0.16
RAB40B-206ENST00000571995 ZNF83P51522 516 aa14.03□□□□□ -0.16
RAB40B-206ENST00000571995 GPR132Q9UNW8 380 aa14.03□□□□□ -0.16
RAB40B-206ENST00000571995 LOC400499M0QZD8 3231 aa14.03□□□□□ -0.16
RAB40B-206ENST00000571995 SSBP1Q04837 148 aaKnown RBP14.03□□□□□ -0.16
RAB40B-206ENST00000571995 LPCAT3Q6P1A2 487 aa14.03□□□□□ -0.16
RAB40B-206ENST00000571995 TFAP2EQ6VUC0 442 aa14.03□□□□□ -0.16
RAB40B-206ENST00000571995 MDP1Q86V88 176 aa14.03□□□□□ -0.16
RAB40B-206ENST00000571995 OR6K3Q8NGY3 331 aa14.03□□□□□ -0.16
RAB40B-206ENST00000571995 PNRC2Q9NPJ4 139 aaKnown RBP14.03□□□□□ -0.16
RAB40B-206ENST00000571995 FAM74A7A6NL05 159 aa14.03□□□□□ -0.16
RAB40B-206ENST00000571995 MFNGO00587 321 aa14.03□□□□□ -0.16
RAB40B-206ENST00000571995 CD63P08962 238 aa14.03□□□□□ -0.16
RAB40B-206ENST00000571995 BMP5P22003 454 aa14.03□□□□□ -0.16
RAB40B-206ENST00000571995 TMEM33P57088 247 aa14.03□□□□□ -0.16
RAB40B-206ENST00000571995 OR8G1Q15617 311 aa14.03□□□□□ -0.16
RAB40B-206ENST00000571995 FAM74A3Q4VXF1 159 aa14.03□□□□□ -0.16
RAB40B-206ENST00000571995 CCDC71LQ8N9Z2 235 aa14.03□□□□□ -0.16
RAB40B-206ENST00000571995 KIRREL1Q96J84 757 aa14.03□□□□□ -0.16
RAB40B-206ENST00000571995 RGCCQ9H4X1 137 aa14.03□□□□□ -0.16
RAB40B-206ENST00000571995 AMDHD2Q9Y303 409 aa14.03□□□□□ -0.16
RAB40B-206ENST00000571995 URGCP-MRPS24S4R325 110 aa14.03□□□□□ -0.16
RAB40B-206ENST00000571995 F8VVB4 439 aa14.02□□□□□ -0.16
RAB40B-206ENST00000571995 F8VWA3 439 aa14.02□□□□□ -0.16
RAB40B-206ENST00000571995 SP1P08047 785 aa14.02□□□□□ -0.16
RAB40B-206ENST00000571995 CELA3BP08861 270 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms