RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 F5H0A9 414 aaPredicted RBP11.01□□□□□ -0.65
CCDC40-205ENST00000571028 DVL1O14640 695 aa11.01□□□□□ -0.65
CCDC40-205ENST00000571028 TNFRSF13BO14836 293 aaPredicted RBP11.01□□□□□ -0.65
CCDC40-205ENST00000571028 NDUFB3O43676 98 aa11.01□□□□□ -0.65
CCDC40-205ENST00000571028 FOXH1O75593 365 aa11.01□□□□□ -0.65
CCDC40-205ENST00000571028 KDM4BO94953 1096 aa11.01□□□□□ -0.65
CCDC40-205ENST00000571028 FSTL3O95633 263 aa11.01□□□□□ -0.65
CCDC40-205ENST00000571028 KNG1P01042 644 aa11.01□□□□□ -0.65
CCDC40-205ENST00000571028 CSTBP04080 98 aaKnown RBP11.01□□□□□ -0.65
CCDC40-205ENST00000571028 NDUFB7P17568 137 aa11.01□□□□□ -0.65
CCDC40-205ENST00000571028 MDKP21741 143 aaPredicted RBP11.01□□□□□ -0.65
CCDC40-205ENST00000571028 SLC22A6Q4U2R8 563 aa11.01□□□□□ -0.65
CCDC40-205ENST00000571028 WDR25Q64LD2 544 aaPredicted RBP11.01□□□□□ -0.65
CCDC40-205ENST00000571028 GLT8D1Q68CQ7 371 aa11.01□□□□□ -0.65
CCDC40-205ENST00000571028 AWAT2Q6E213 333 aa11.01□□□□□ -0.65
CCDC40-205ENST00000571028 METAP1DQ6UB28 335 aaPredicted RBP11.01□□□□□ -0.65
CCDC40-205ENST00000571028 FIP1L1Q6UN15 594 aaKnown RBP11.01□□□□□ -0.65
CCDC40-205ENST00000571028 GLIPR1L1Q6UWM5 242 aa11.01□□□□□ -0.65
CCDC40-205ENST00000571028 Q8IYB0 196 aa11.01□□□□□ -0.65
CCDC40-205ENST00000571028 SAXO1Q8IYX7 474 aa11.01□□□□□ -0.65
CCDC40-205ENST00000571028 NKAIN3Q8N8D7 197 aa11.01□□□□□ -0.65
CCDC40-205ENST00000571028 ZSCAN4Q8NAM6 433 aaPredicted RBP11.01□□□□□ -0.65
CCDC40-205ENST00000571028 ZNRF1Q8ND25 227 aa11.01□□□□□ -0.65
CCDC40-205ENST00000571028 ANGPTL6Q8NI99 470 aa11.01□□□□□ -0.65
CCDC40-205ENST00000571028 H1FXQ92522 213 aaKnown RBP11.01□□□□□ -0.65
CCDC40-205ENST00000571028 PHYHIPQ92561 330 aa11.01□□□□□ -0.65
CCDC40-205ENST00000571028 C12orf43Q96C57 262 aaKnown RBP11.01□□□□□ -0.65
CCDC40-205ENST00000571028 MRPS26Q9BYN8 205 aaKnown RBP11.01□□□□□ -0.65
CCDC40-205ENST00000571028 RNF167Q9H6Y7 350 aa11.01□□□□□ -0.65
CCDC40-205ENST00000571028 HES4Q9HCC6 221 aa11.01□□□□□ -0.65
CCDC40-205ENST00000571028 OR5V1Q9UGF6 321 aa11.01□□□□□ -0.65
CCDC40-205ENST00000571028 OPN4Q9UHM6 478 aa11.01□□□□□ -0.65
CCDC40-205ENST00000571028 NUP50Q9UKX7 468 aa11.01□□□□□ -0.65
CCDC40-205ENST00000571028 SIRPB1O00241 398 aa11□□□□□ -0.65
CCDC40-205ENST00000571028 HAND1O96004 215 aa11□□□□□ -0.65
CCDC40-205ENST00000571028 FSHBP01225 129 aa11□□□□□ -0.65
CCDC40-205ENST00000571028 ACAA1P09110 424 aaPredicted RBP11□□□□□ -0.65
CCDC40-205ENST00000571028 JUNBP17275 347 aaPredicted RBP11□□□□□ -0.65
CCDC40-205ENST00000571028 LSM3P62310 102 aaKnown RBP11□□□□□ -0.65
CCDC40-205ENST00000571028 COL10A1Q03692 680 aa11□□□□□ -0.65
CCDC40-205ENST00000571028 DGUOKQ16854 277 aa11□□□□□ -0.65
CCDC40-205ENST00000571028 LRRC10Q5BKY1 277 aa11□□□□□ -0.65
CCDC40-205ENST00000571028 ZNF841Q6ZN19 808 aa11□□□□□ -0.65
CCDC40-205ENST00000571028 ZNF788Q6ZQV5 615 aa11□□□□□ -0.65
CCDC40-205ENST00000571028 ASCC1Q8N9N2 400 aaKnown RBP11□□□□□ -0.65
CCDC40-205ENST00000571028 PXT1Q8NFP0 134 aa11□□□□□ -0.65
CCDC40-205ENST00000571028 OR4D6Q8NGJ1 314 aa11□□□□□ -0.65
CCDC40-205ENST00000571028 MED30Q96HR3 178 aa11□□□□□ -0.65
CCDC40-205ENST00000571028 PLGRKTQ9HBL7 147 aa11□□□□□ -0.65
CCDC40-205ENST00000571028 HMG20AQ9NP66 347 aa11□□□□□ -0.65
CCDC40-205ENST00000571028 TXNL4BQ9NX01 149 aaKnown RBP11□□□□□ -0.65
CCDC40-205ENST00000571028 ING3Q9NXR8 418 aa11□□□□□ -0.65
CCDC40-205ENST00000571028 A0A1W2PP11 408 aa10.99□□□□□ -0.65
CCDC40-205ENST00000571028 SHISA3A0PJX4 238 aa10.99□□□□□ -0.65
CCDC40-205ENST00000571028 PDCD5O14737 125 aa10.99□□□□□ -0.65
CCDC40-205ENST00000571028 TIMM23O14925 209 aa10.99□□□□□ -0.65
CCDC40-205ENST00000571028 SIGLEC5O15389 551 aa10.99□□□□□ -0.65
CCDC40-205ENST00000571028 ZNF44P15621 663 aa10.99□□□□□ -0.65
CCDC40-205ENST00000571028 GABRR1P24046 479 aa10.99□□□□□ -0.65
CCDC40-205ENST00000571028 OR10A3P58181 314 aa10.99□□□□□ -0.65
CCDC40-205ENST00000571028 P2RY14Q15391 338 aa10.99□□□□□ -0.65
CCDC40-205ENST00000571028 PIGYQ3MUY2 71 aa10.99□□□□□ -0.65
CCDC40-205ENST00000571028 HES5Q5TA89 166 aa10.99□□□□□ -0.65
CCDC40-205ENST00000571028 ATPAF1Q5TC12 328 aaPredicted RBP10.99□□□□□ -0.65
CCDC40-205ENST00000571028 BRICD5Q6PL45 260 aa10.99□□□□□ -0.65
CCDC40-205ENST00000571028 CD200R1LQ6Q8B3 271 aa10.99□□□□□ -0.65
CCDC40-205ENST00000571028 GFI1Q99684 422 aa10.99□□□□□ -0.65
CCDC40-205ENST00000571028 MS4A7Q9GZW8 240 aaPredicted RBP10.99□□□□□ -0.65
CCDC40-205ENST00000571028 BANF2Q9H503 90 aa10.99□□□□□ -0.65
CCDC40-205ENST00000571028 MMP26Q9NRE1 261 aa10.99□□□□□ -0.65
CCDC40-205ENST00000571028 KAAG1Q9UBP8 84 aa10.99□□□□□ -0.65
CCDC40-205ENST00000571028 SLC25A10Q9UBX3 287 aaPredicted RBP10.99□□□□□ -0.65
CCDC40-205ENST00000571028 ZNF69Q9UC07 566 aa10.99□□□□□ -0.65
CCDC40-205ENST00000571028 GLS2Q9UI32 602 aa10.99□□□□□ -0.65
CCDC40-205ENST00000571028 ZNF222Q9UK12 451 aa10.99□□□□□ -0.65
CCDC40-205ENST00000571028 MAB21L2Q9Y586 359 aa10.99□□□□□ -0.65
CCDC40-205ENST00000571028 NOTCH1P46531 2555 aa10.99□□□□□ -0.65
CCDC40-205ENST00000571028 A0A1B0GUS0 222 aa10.98□□□□□ -0.65
CCDC40-205ENST00000571028 TRIM64CA6NLI5 447 aa10.98□□□□□ -0.65
CCDC40-205ENST00000571028 CLDN34H7C241 214 aa10.98□□□□□ -0.65
CCDC40-205ENST00000571028 HSPB6O14558 160 aa10.98□□□□□ -0.65
CCDC40-205ENST00000571028 SH2D1BO14796 132 aa10.98□□□□□ -0.65
CCDC40-205ENST00000571028 DEGS1O15121 323 aa10.98□□□□□ -0.65
CCDC40-205ENST00000571028 AIREO43918 545 aa10.98□□□□□ -0.65
CCDC40-205ENST00000571028 FCN3O75636 299 aa10.98□□□□□ -0.65
CCDC40-205ENST00000571028 CRTAPO75718 401 aaPredicted RBP10.98□□□□□ -0.65
CCDC40-205ENST00000571028 CHRM2P08172 466 aa10.98□□□□□ -0.65
CCDC40-205ENST00000571028 OMGP23515 440 aa10.98□□□□□ -0.65
CCDC40-205ENST00000571028 MTNR1BP49286 362 aa10.98□□□□□ -0.65
CCDC40-205ENST00000571028 CLDN12P56749 244 aa10.98□□□□□ -0.65
CCDC40-205ENST00000571028 FGF12P61328 243 aa10.98□□□□□ -0.65
CCDC40-205ENST00000571028 MXD1Q05195 221 aa10.98□□□□□ -0.65
CCDC40-205ENST00000571028 BTN2A1Q7KYR7 527 aa10.98□□□□□ -0.65
CCDC40-205ENST00000571028 OR4M1Q8NGD0 313 aa10.98□□□□□ -0.65
CCDC40-205ENST00000571028 FAM46BQ96A09 425 aa10.98□□□□□ -0.65
CCDC40-205ENST00000571028 FOXRED1Q96CU9 486 aaPredicted RBP10.98□□□□□ -0.65
CCDC40-205ENST00000571028 YIPF6Q96EC8 236 aa10.98□□□□□ -0.65
CCDC40-205ENST00000571028 CENPOQ9BU64 300 aa10.98□□□□□ -0.65
CCDC40-205ENST00000571028 CHST6Q9GZX3 395 aa10.98□□□□□ -0.65
CCDC40-205ENST00000571028 KCNK15Q9H427 330 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms