RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 EXTL1Q92935 676 aa6.77□□□□□ -1.33
LINC00559-201ENST00000569476 ZNF75AQ96N20 296 aa6.77□□□□□ -1.33
LINC00559-201ENST00000569476 GINS3Q9BRX5 216 aa6.77□□□□□ -1.33
LINC00559-201ENST00000569476 FAAP24Q9BTP7 215 aa6.77□□□□□ -1.33
LINC00559-201ENST00000569476 NARFLQ9H6Q4 476 aa6.77□□□□□ -1.33
LINC00559-201ENST00000569476 LPAR3Q9UBY5 353 aa6.77□□□□□ -1.33
LINC00559-201ENST00000569476 MMP24Q9Y5R2 645 aa6.77□□□□□ -1.33
LINC00559-201ENST00000569476 ATP23Q9Y6H3 246 aa6.77□□□□□ -1.33
LINC00559-201ENST00000569476 LOC100509620A0A075B734 347 aa6.77□□□□□ -1.33
LINC00559-201ENST00000569476 H0YIZ8 118 aa6.77□□□□□ -1.33
LINC00559-201ENST00000569476 TRIM77I1YAP6 450 aa6.77□□□□□ -1.33
LINC00559-201ENST00000569476 TNFSF15O95150 251 aa6.77□□□□□ -1.33
LINC00559-201ENST00000569476 MBPP02686 304 aaPredicted RBP6.77□□□□□ -1.33
LINC00559-201ENST00000569476 TK1P04183 234 aa6.77□□□□□ -1.33
LINC00559-201ENST00000569476 RAC2P15153 192 aa6.77□□□□□ -1.33
LINC00559-201ENST00000569476 MAGEA5P43359 124 aa6.77□□□□□ -1.33
LINC00559-201ENST00000569476 PIGPP57054 158 aa6.77□□□□□ -1.33
LINC00559-201ENST00000569476 LFNGQ8NES3 379 aa6.77□□□□□ -1.33
LINC00559-201ENST00000569476 OR5D13Q8NGL4 314 aa6.77□□□□□ -1.33
LINC00559-201ENST00000569476 OR2AE1Q8NHA4 323 aa6.77□□□□□ -1.33
LINC00559-201ENST00000569476 RTN4IP1Q8WWV3 396 aaPredicted RBP6.77□□□□□ -1.33
LINC00559-201ENST00000569476 SLC25A31Q9H0C2 315 aa6.77□□□□□ -1.33
LINC00559-201ENST00000569476 TMEM222Q9H0R3 208 aa6.77□□□□□ -1.33
LINC00559-201ENST00000569476 CLCF1Q9UBD9 225 aa6.77□□□□□ -1.33
LINC00559-201ENST00000569476 SLC22A20A6NK97 555 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 CD300LBA8K4G0 201 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 H0Y980 276 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 K7EPK0 472 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 ABCD4O14678 606 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 GEMIN2O14893 280 aaKnown RBP6.76□□□□□ -1.33
LINC00559-201ENST00000569476 RPL12P30050 165 aaKnown RBP6.76□□□□□ -1.33
LINC00559-201ENST00000569476 PJVKQ0ZLH3 352 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 FAM76BQ5HYJ3 339 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 TRAT1Q6PIZ9 186 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 SSX8Q7RTT4 187 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 OR4D5Q8NGN0 318 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 FGFBP3Q8TAT2 258 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 MSI2Q96DH6 328 aaKnown RBP6.76□□□□□ -1.33
LINC00559-201ENST00000569476 SEC22AQ96IW7 307 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 NKX3-1Q99801 234 aaPredicted RBP6.76□□□□□ -1.33
LINC00559-201ENST00000569476 SEC11CQ9BY50 192 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 CALHM2Q9HA72 323 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 A0A1W2PNU3 283 aaPredicted RBP6.76□□□□□ -1.33
LINC00559-201ENST00000569476 IQCF6A8MYZ5 107 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 SPRY1O43609 319 aaPredicted RBP6.76□□□□□ -1.33
LINC00559-201ENST00000569476 CEACAM4O75871 244 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 LIPCP11150 499 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 UCP1P25874 307 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 PAX6P26367 422 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 TAF9Q16594 264 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 SVBPQ8N300 66 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 OR5D18Q8NGL1 313 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 NPRL2Q8WTW4 380 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 WNT2BQ93097 391 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 OR10C1Q96KK4 312 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 LINC00052Q96N35 136 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 PAPOLGQ9BWT3 736 aaKnown RBP6.76□□□□□ -1.33
LINC00559-201ENST00000569476 PARD6GQ9BYG4 376 aaPredicted RBP6.76□□□□□ -1.33
LINC00559-201ENST00000569476 C11orf1Q9H5F2 150 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 ZNF442Q9H7R0 627 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 TAS2R3Q9NYW6 316 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 BTBD17A6NE02 478 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 RNF212BA8MTL3 300 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 ST8SIA3O43173 380 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 PPYP01298 95 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 FAM157CP0CG43 387 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 ZNF250P15622 560 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 RAB1AP62820 205 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 CLN3Q13286 438 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 RAB32Q13637 225 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 HPSE2Q8WWQ2 592 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 SLC2A9Q9NRM0 540 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 NCKAP5O14513 1909 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.76□□□□□ -1.33
LINC00559-201ENST00000569476 MSTNO14793 375 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 MPPED1O15442 326 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 CBR1P16152 277 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 FCGR2CP31995 323 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 ARHGDIBP52566 201 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 HLA-DRB3P79483 266 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 ACSF3Q4G176 576 aaPredicted RBP6.76□□□□□ -1.33
LINC00559-201ENST00000569476 ZNF585AQ6P3V2 769 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 FAM90A1Q86YD7 464 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 ZNF565Q8N9K5 539 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 PRR7Q8TB68 274 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 LSM10Q969L4 123 aaKnown RBP6.76□□□□□ -1.33
LINC00559-201ENST00000569476 TLNRD1Q9H1K6 362 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 OR51I2Q9H344 312 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 NCOR1P1Q9H4R4 102 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 SPEF1Q9Y4P9 236 aa6.76□□□□□ -1.33
LINC00559-201ENST00000569476 ASXL3Q9C0F0 2248 aa6.75□□□□□ -1.33
LINC00559-201ENST00000569476 TRAV17A0A0B4J275 112 aa6.75□□□□□ -1.33
LINC00559-201ENST00000569476 PITX3O75364 302 aa6.75□□□□□ -1.33
LINC00559-201ENST00000569476 SLC34A2O95436 690 aa6.75□□□□□ -1.33
LINC00559-201ENST00000569476 COX5AP20674 150 aa6.75□□□□□ -1.33
LINC00559-201ENST00000569476 F2RL1P55085 397 aa6.75□□□□□ -1.33
LINC00559-201ENST00000569476 SLC25A26Q70HW3 274 aa6.75□□□□□ -1.33
LINC00559-201ENST00000569476 CMTM1Q8IZ96 169 aa6.75□□□□□ -1.33
LINC00559-201ENST00000569476 TSNAXQ99598 290 aaKnown RBP6.75□□□□□ -1.33
LINC00559-201ENST00000569476 WDR13Q9H1Z4 485 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms