RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 RPL36Q9Y3U8 105 aaKnown RBP3.89□□□□□ -1.79
CLK3-219ENST00000567805 TBL2Q9Y4P3 447 aaKnown RBP3.89□□□□□ -1.79
CLK3-219ENST00000567805 PCDHGB5Q9Y5G0 923 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 LINC00312Q9Y6C7 94 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 KIAA2026Q5HYC2 2103 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 IRGMA1A4Y4 181 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 FUOMA2VDF0 154 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 FAM90A8PA6NJQ4 464 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 VGLL3A8MV65 326 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 ODF3BA8MYP8 253 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 SH2D1BO14796 132 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 MGST3O14880 152 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 SULT1B1O43704 296 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 PSPNO60542 156 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 KDM4BO94953 1096 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 INMTO95050 263 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 ZFPL1O95159 310 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 BAG2O95816 211 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 PF4P02776 101 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 ARG1P05089 322 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 HCKP08631 526 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 IGHV1-8P0DP01 117 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 PRKACAP17612 351 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 COX7A1P24310 79 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 LMO1P25800 156 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 DUSP1P28562 367 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 ERP29P30040 261 aaKnown RBP3.88□□□□□ -1.79
CLK3-219ENST00000567805 GBX2P52951 348 aaPredicted RBP3.88□□□□□ -1.79
CLK3-219ENST00000567805 SRSF4Q08170 494 aaKnown RBP3.88□□□□□ -1.79
CLK3-219ENST00000567805 EDDM3AQ14507 147 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 KISS1Q15726 138 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 CCDC58Q4VC31 144 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 MINOS1Q5TGZ0 78 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 ZNF691Q5VV52 312 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 ZNF626Q68DY1 528 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 SLC35E4Q6ICL7 350 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 C11orf88Q6PI97 169 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 CRIP3Q6Q6R5 217 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 ZNF782Q6ZMW2 699 aaPredicted RBP3.88□□□□□ -1.79
CLK3-219ENST00000567805 TCF23Q7RTU1 214 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 PARP16Q8N5Y8 322 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 CHST4Q8NCG5 386 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 ZNF555Q8NEP9 628 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 OR11H6Q8NGC7 330 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 OR52N4Q8NGI2 321 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 OR52I1Q8NGK6 324 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 OR5D14Q8NGL3 314 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 OR4C13Q8NGP0 309 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 OR13C9Q8NGT0 318 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 OR10AC1Q8NH08 325 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 OR5AK2Q8NH90 309 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 TSEN15Q8WW01 171 aaKnown RBP3.88□□□□□ -1.79
CLK3-219ENST00000567805 APH1BQ8WW43 257 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 STMN2Q93045 179 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 RFT1Q96AA3 541 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 MALSU1Q96EH3 234 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 SPACA5Q96QH8 159 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 PDCD1LG2Q9BQ51 273 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 ZNF649Q9BS31 505 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 JAM3Q9BX67 310 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 CDCA4Q9BXL8 241 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 CHST6Q9GZX3 395 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 MMP27Q9H306 513 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 GAL3ST2Q9H3Q3 398 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 RANBP3Q9H6Z4 567 aaPredicted RBP3.88□□□□□ -1.79
CLK3-219ENST00000567805 ISG20L2Q9H9L3 353 aaKnown RBP3.88□□□□□ -1.79
CLK3-219ENST00000567805 TCF7L1Q9HCS4 588 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 HMG20AQ9NP66 347 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 AMBNQ9NP70 447 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 FGF20Q9NP95 211 aaPredicted RBP3.88□□□□□ -1.79
CLK3-219ENST00000567805 EXOSC4Q9NPD3 245 aaKnown RBP3.88□□□□□ -1.79
CLK3-219ENST00000567805 C8orf4Q9NR00 106 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 SMPD3Q9NY59 655 aaPredicted RBP3.88□□□□□ -1.79
CLK3-219ENST00000567805 IL36RNQ9UBH0 155 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 FBLN5Q9UBX5 448 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 MYRFQ9Y2G1 1151 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 GSTK1Q9Y2Q3 226 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 UBE2J1Q9Y385 318 aaPredicted RBP3.88□□□□□ -1.79
CLK3-219ENST00000567805 SESN1Q9Y6P5 492 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 MINOS1-NBL1R4GNA1 71 aa3.88□□□□□ -1.79
CLK3-219ENST00000567805 IGHV2-26A0A0B4J1V2 119 aa3.87□□□□□ -1.79
CLK3-219ENST00000567805 IGKV1-12A0A0C4DH73 117 aa3.87□□□□□ -1.79
CLK3-219ENST00000567805 A0A0G2JK05 382 aa3.87□□□□□ -1.79
CLK3-219ENST00000567805 MEX3AA1L020 520 aaKnown RBP3.87□□□□□ -1.79
CLK3-219ENST00000567805 E9PI62 339 aa3.87□□□□□ -1.79
CLK3-219ENST00000567805 SIRPB1O00241 398 aa3.87□□□□□ -1.79
CLK3-219ENST00000567805 MAGEB3O15480 346 aa3.87□□□□□ -1.79
CLK3-219ENST00000567805 WBP4O75554 376 aaKnown RBP3.87□□□□□ -1.79
CLK3-219ENST00000567805 OR2H2O95918 312 aa3.87□□□□□ -1.79
CLK3-219ENST00000567805 IGKV1D-12P01611 117 aa3.87□□□□□ -1.79
CLK3-219ENST00000567805 CSN2P05814 226 aa3.87□□□□□ -1.79
CLK3-219ENST00000567805 CD2P06729 351 aa3.87□□□□□ -1.79
CLK3-219ENST00000567805 LIMS3P0CW19 117 aa3.87□□□□□ -1.79
CLK3-219ENST00000567805 LIMS4P0CW20 117 aa3.87□□□□□ -1.79
CLK3-219ENST00000567805 TMEM225BP0DP42 221 aa3.87□□□□□ -1.79
CLK3-219ENST00000567805 CALCBP10092 127 aa3.87□□□□□ -1.79
CLK3-219ENST00000567805 MYL12AP19105 171 aa3.87□□□□□ -1.79
CLK3-219ENST00000567805 PAX6P26367 422 aa3.87□□□□□ -1.79
CLK3-219ENST00000567805 DCKP27707 260 aa3.87□□□□□ -1.79
CLK3-219ENST00000567805 GABRA5P31644 462 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms