RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 DTX2Q86UW9 622 aa25.73■■□□□ 1.71
CTCF-203ENST00000566078 FBXO9Q9UK97 447 aaPredicted RBP25.73■■□□□ 1.71
CTCF-203ENST00000566078 NPTNQ9Y639 398 aa25.73■■□□□ 1.71
CTCF-203ENST00000566078 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP25.72■■□□□ 1.71
CTCF-203ENST00000566078 CYB5R3P00387 301 aaPredicted RBP25.72■■□□□ 1.71
CTCF-203ENST00000566078 LHBP01229 141 aa25.72■■□□□ 1.71
CTCF-203ENST00000566078 IRF2P14316 349 aa25.72■■□□□ 1.71
CTCF-203ENST00000566078 ZNF44P15621 663 aa25.72■■□□□ 1.71
CTCF-203ENST00000566078 Q6P435 159 aa25.72■■□□□ 1.71
CTCF-203ENST00000566078 TGIF2LYQ8IUE0 185 aa25.72■■□□□ 1.71
CTCF-203ENST00000566078 SETD6Q8TBK2 473 aa25.72■■□□□ 1.71
CTCF-203ENST00000566078 HPS1Q92902 700 aa25.72■■□□□ 1.71
CTCF-203ENST00000566078 IFT22Q9H7X7 185 aa25.72■■□□□ 1.71
CTCF-203ENST00000566078 SPACA1Q9HBV2 294 aa25.72■■□□□ 1.71
CTCF-203ENST00000566078 AK3Q9UIJ7 227 aa25.72■■□□□ 1.71
CTCF-203ENST00000566078 DCHS2Q6V1P9 2916 aa25.72■■□□□ 1.71
CTCF-203ENST00000566078 UBE2QL1A1L167 161 aa25.71■■□□□ 1.71
CTCF-203ENST00000566078 H3BUI4 141 aa25.71■■□□□ 1.71
CTCF-203ENST00000566078 DEGS1O15121 323 aa25.71■■□□□ 1.71
CTCF-203ENST00000566078 HAND1O96004 215 aa25.71■■□□□ 1.71
CTCF-203ENST00000566078 KNG1P01042 644 aa25.71■■□□□ 1.71
CTCF-203ENST00000566078 ACTBP60709 375 aa25.71■■□□□ 1.71
CTCF-203ENST00000566078 ACTG1P63261 375 aa25.71■■□□□ 1.71
CTCF-203ENST00000566078 ASAH1Q13510 395 aa25.71■■□□□ 1.71
CTCF-203ENST00000566078 DYRK2Q92630 601 aa25.71■■□□□ 1.71
CTCF-203ENST00000566078 TRAF4Q9BUZ4 470 aaPredicted RBP25.71■■□□□ 1.71
CTCF-203ENST00000566078 DNAJB11Q9UBS4 358 aa25.71■■□□□ 1.71
CTCF-203ENST00000566078 TENM4Q6N022 2769 aa25.71■■□□□ 1.71
CTCF-203ENST00000566078 SIRPB1O00241 398 aa25.7■■□□□ 1.71
CTCF-203ENST00000566078 HSPB6O14558 160 aa25.7■■□□□ 1.71
CTCF-203ENST00000566078 SH2D1BO14796 132 aa25.7■■□□□ 1.71
CTCF-203ENST00000566078 CA11O75493 328 aa25.7■■□□□ 1.71
CTCF-203ENST00000566078 OR2H2O95918 312 aa25.7■■□□□ 1.71
CTCF-203ENST00000566078 FCER2P06734 321 aa25.7■■□□□ 1.71
CTCF-203ENST00000566078 CD80P33681 288 aa25.7■■□□□ 1.71
CTCF-203ENST00000566078 CEBPDP49716 269 aaPredicted RBP25.7■■□□□ 1.71
CTCF-203ENST00000566078 SSBP1Q04837 148 aaKnown RBP25.7■■□□□ 1.71
CTCF-203ENST00000566078 SUMF2Q8NBJ7 301 aa25.7■■□□□ 1.71
CTCF-203ENST00000566078 GLS2Q9UI32 602 aa25.7■■□□□ 1.71
CTCF-203ENST00000566078 TRAV24A0A0B4J272 114 aa25.7■■□□□ 1.7
CTCF-203ENST00000566078 FAM221AA4D161 298 aa25.7■■□□□ 1.7
CTCF-203ENST00000566078 LRRC30A6NM36 301 aa25.7■■□□□ 1.7
CTCF-203ENST00000566078 VGLL3A8MV65 326 aa25.7■■□□□ 1.7
CTCF-203ENST00000566078 PLA2G10O15496 165 aa25.7■■□□□ 1.7
CTCF-203ENST00000566078 ECDO95905 644 aaPredicted RBP25.7■■□□□ 1.7
CTCF-203ENST00000566078 HPXP02790 462 aa25.7■■□□□ 1.7
CTCF-203ENST00000566078 GSTT2BP0CG30 244 aa25.7■■□□□ 1.7
CTCF-203ENST00000566078 KLF9Q13886 244 aaPredicted RBP25.7■■□□□ 1.7
CTCF-203ENST00000566078 IFT46Q9NQC8 304 aa25.7■■□□□ 1.7
CTCF-203ENST00000566078 DCAF16Q9NXF7 216 aa25.7■■□□□ 1.7
CTCF-203ENST00000566078 LAMP3Q9UQV4 416 aa25.7■■□□□ 1.7
CTCF-203ENST00000566078 PLEKHA6Q9Y2H5 1048 aa25.7■■□□□ 1.7
CTCF-203ENST00000566078 CACNG2Q9Y698 323 aa25.7■■□□□ 1.7
CTCF-203ENST00000566078 FAM201AQ5SY85 155 aa25.69■■□□□ 1.7
CTCF-203ENST00000566078 FAM90A1Q86YD7 464 aa25.69■■□□□ 1.7
CTCF-203ENST00000566078 RDH5Q92781 318 aa25.69■■□□□ 1.7
CTCF-203ENST00000566078 COX4I2Q96KJ9 171 aa25.69■■□□□ 1.7
CTCF-203ENST00000566078 HDHD3Q9BSH5 251 aaPredicted RBP25.69■■□□□ 1.7
CTCF-203ENST00000566078 C11orf54Q9H0W9 315 aaPredicted RBP25.69■■□□□ 1.7
CTCF-203ENST00000566078 NLKQ9UBE8 527 aa25.69■■□□□ 1.7
CTCF-203ENST00000566078 IGHV3OR15-7A0A075B7D8 119 aa25.68■■□□□ 1.7
CTCF-203ENST00000566078 ANKRD20A5PA0PJZ0 165 aa25.68■■□□□ 1.7
CTCF-203ENST00000566078 CSF1P09603 554 aa25.68■■□□□ 1.7
CTCF-203ENST00000566078 COX6B1P14854 86 aa25.68■■□□□ 1.7
CTCF-203ENST00000566078 MRPS15P82914 257 aaKnown RBP25.68■■□□□ 1.7
CTCF-203ENST00000566078 GVQW1Q8N7I0 195 aa25.68■■□□□ 1.7
CTCF-203ENST00000566078 NEK7Q8TDX7 302 aa25.68■■□□□ 1.7
CTCF-203ENST00000566078 CMSS1Q9BQ75 279 aaKnown RBP25.68■■□□□ 1.7
CTCF-203ENST00000566078 DPCDQ9BVM2 203 aaPredicted RBP25.68■■□□□ 1.7
CTCF-203ENST00000566078 CACNG6Q9BXT2 260 aa25.68■■□□□ 1.7
CTCF-203ENST00000566078 WIPI2Q9Y4P8 454 aa25.68■■□□□ 1.7
CTCF-203ENST00000566078 RFPL4AA6NLU0 287 aa25.67■■□□□ 1.7
CTCF-203ENST00000566078 MCRIP1C9JLW8 97 aa25.67■■□□□ 1.7
CTCF-203ENST00000566078 RFPL4AL1F8VTS6 287 aa25.67■■□□□ 1.7
CTCF-203ENST00000566078 SLC33A1O00400 549 aaPredicted RBP25.67■■□□□ 1.7
CTCF-203ENST00000566078 RCVRNP35243 200 aa25.67■■□□□ 1.7
CTCF-203ENST00000566078 AP3S2P59780 193 aa25.67■■□□□ 1.7
CTCF-203ENST00000566078 TLE4Q04727 773 aa25.67■■□□□ 1.7
CTCF-203ENST00000566078 OR5T2Q8NGG2 359 aa25.67■■□□□ 1.7
CTCF-203ENST00000566078 RAB1BQ9H0U4 201 aa25.67■■□□□ 1.7
CTCF-203ENST00000566078 TAS2R8Q9NYW2 309 aa25.67■■□□□ 1.7
CTCF-203ENST00000566078 IGHV1-69-2A0A0G2JMI3 117 aa25.66■■□□□ 1.7
CTCF-203ENST00000566078 LYRM1O43325 122 aa25.66■■□□□ 1.7
CTCF-203ENST00000566078 TFF1P04155 84 aa25.66■■□□□ 1.7
CTCF-203ENST00000566078 PAN3Q58A45 887 aaKnown RBP25.66■■□□□ 1.7
CTCF-203ENST00000566078 SP5Q6BEB4 398 aaPredicted RBP25.66■■□□□ 1.7
CTCF-203ENST00000566078 SFRP4Q6FHJ7 346 aaPredicted RBP25.66■■□□□ 1.7
CTCF-203ENST00000566078 BPIFB2Q8N4F0 458 aa25.66■■□□□ 1.7
CTCF-203ENST00000566078 TMEM106BQ9NUM4 274 aa25.66■■□□□ 1.7
CTCF-203ENST00000566078 PSG2P11465 335 aa25.66■■□□□ 1.7
CTCF-203ENST00000566078 CBX5P45973 191 aa25.66■■□□□ 1.7
CTCF-203ENST00000566078 CCL17Q92583 94 aa25.66■■□□□ 1.7
CTCF-203ENST00000566078 CLEC4MQ9H2X3 399 aaPredicted RBP25.66■■□□□ 1.7
CTCF-203ENST00000566078 OR2AT4A6NND4 320 aa25.65■■□□□ 1.7
CTCF-203ENST00000566078 ZNF205O95201 554 aa25.65■■□□□ 1.7
CTCF-203ENST00000566078 C1orf87Q8N0U7 546 aa25.65■■□□□ 1.7
CTCF-203ENST00000566078 OCSTAMPQ9BR26 566 aa25.65■■□□□ 1.7
CTCF-203ENST00000566078 ZNF701Q9NV72 531 aaPredicted RBP25.65■■□□□ 1.7
CTCF-203ENST00000566078 PTTG1O95997 202 aa25.64■■□□□ 1.7
CTCF-203ENST00000566078 GLAP06280 429 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms