RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 OR2T6Q8NHC8 308 aa12.63□□□□□ -0.39
CDH3-204ENST00000565453 APH1BQ8WW43 257 aa12.63□□□□□ -0.39
CDH3-204ENST00000565453 NPFFR1Q9GZQ6 430 aa12.63□□□□□ -0.39
CDH3-204ENST00000565453 COMMD4Q9H0A8 199 aa12.63□□□□□ -0.39
CDH3-204ENST00000565453 TMEM133Q9H2Q1 129 aa12.63□□□□□ -0.39
CDH3-204ENST00000565453 ZCCHC4Q9H5U6 513 aa12.63□□□□□ -0.39
CDH3-204ENST00000565453 S100A14Q9HCY8 104 aa12.63□□□□□ -0.39
CDH3-204ENST00000565453 AMBNQ9NP70 447 aa12.63□□□□□ -0.39
CDH3-204ENST00000565453 MRPS18AQ9NVS2 196 aaKnown RBP12.63□□□□□ -0.39
CDH3-204ENST00000565453 ERVK13-1Q9NX77 482 aa12.63□□□□□ -0.39
CDH3-204ENST00000565453 GSTK1Q9Y2Q3 226 aa12.63□□□□□ -0.39
CDH3-204ENST00000565453 IGHV2-26A0A0B4J1V2 119 aa12.62□□□□□ -0.39
CDH3-204ENST00000565453 LOC100130705A0A1B0GUX0 176 aa12.62□□□□□ -0.39
CDH3-204ENST00000565453 ZFPL1O95159 310 aa12.62□□□□□ -0.39
CDH3-204ENST00000565453 OR2H2O95918 312 aa12.62□□□□□ -0.39
CDH3-204ENST00000565453 JUNBP17275 347 aaPredicted RBP12.62□□□□□ -0.39
CDH3-204ENST00000565453 ZP1P60852 638 aa12.62□□□□□ -0.39
CDH3-204ENST00000565453 RAB40BQ12829 278 aa12.62□□□□□ -0.39
CDH3-204ENST00000565453 DYNC1I2Q13409 638 aaKnown RBP12.62□□□□□ -0.39
CDH3-204ENST00000565453 MINOS1Q5TGZ0 78 aa12.62□□□□□ -0.39
CDH3-204ENST00000565453 HIST2H2BDQ6DRA6 164 aa12.62□□□□□ -0.39
CDH3-204ENST00000565453 Q6P435 159 aa12.62□□□□□ -0.39
CDH3-204ENST00000565453 Q6ZTK2 550 aa12.62□□□□□ -0.39
CDH3-204ENST00000565453 C10orf67Q8IYJ2 551 aa12.62□□□□□ -0.39
CDH3-204ENST00000565453 PQLC1Q8N2U9 271 aa12.62□□□□□ -0.39
CDH3-204ENST00000565453 OR52I1Q8NGK6 324 aa12.62□□□□□ -0.39
CDH3-204ENST00000565453 OR5D18Q8NGL1 313 aa12.62□□□□□ -0.39
CDH3-204ENST00000565453 RPS4Y2Q8TD47 263 aa12.62□□□□□ -0.39
CDH3-204ENST00000565453 CORO2AQ92828 525 aa12.62□□□□□ -0.39
CDH3-204ENST00000565453 MRPL48Q96GC5 212 aaKnown RBP12.62□□□□□ -0.39
CDH3-204ENST00000565453 Q96MT0 163 aa12.62□□□□□ -0.39
CDH3-204ENST00000565453 RHOFQ9HBH0 211 aa12.62□□□□□ -0.39
CDH3-204ENST00000565453 EXOSC4Q9NPD3 245 aaKnown RBP12.62□□□□□ -0.39
CDH3-204ENST00000565453 INPP5EQ9NRR6 644 aa12.62□□□□□ -0.39
CDH3-204ENST00000565453 FAM118AQ9NWS6 357 aa12.62□□□□□ -0.39
CDH3-204ENST00000565453 GLS2Q9UI32 602 aa12.62□□□□□ -0.39
CDH3-204ENST00000565453 UBE2J1Q9Y385 318 aaPredicted RBP12.62□□□□□ -0.39
CDH3-204ENST00000565453 MINOS1-NBL1R4GNA1 71 aa12.62□□□□□ -0.39
CDH3-204ENST00000565453 TET2Q6N021 2002 aaPredicted RBP12.62□□□□□ -0.39
CDH3-204ENST00000565453 SH2D1BO14796 132 aa12.61□□□□□ -0.39
CDH3-204ENST00000565453 FADS2O95864 444 aaKnown RBP12.61□□□□□ -0.39
CDH3-204ENST00000565453 CSF1P09603 554 aa12.61□□□□□ -0.39
CDH3-204ENST00000565453 MRPL28Q13084 256 aaKnown RBP12.61□□□□□ -0.39
CDH3-204ENST00000565453 BAIAP2L2Q6UXY1 529 aa12.61□□□□□ -0.39
CDH3-204ENST00000565453 ZBTB49Q6ZSB9 765 aa12.61□□□□□ -0.39
CDH3-204ENST00000565453 TMEM219Q86XT9 240 aa12.61□□□□□ -0.39
CDH3-204ENST00000565453 PARP16Q8N5Y8 322 aa12.61□□□□□ -0.39
CDH3-204ENST00000565453 OR4P4Q8NGL7 312 aa12.61□□□□□ -0.39
CDH3-204ENST00000565453 FAM110DQ8TAY7 271 aaPredicted RBP12.61□□□□□ -0.39
CDH3-204ENST00000565453 MYCBPQ99417 103 aaPredicted RBP12.61□□□□□ -0.39
CDH3-204ENST00000565453 NKX3-1Q99801 234 aaPredicted RBP12.61□□□□□ -0.39
CDH3-204ENST00000565453 CLEC7AQ9BXN2 247 aa12.61□□□□□ -0.39
CDH3-204ENST00000565453 ABCB10Q9NRK6 738 aa12.61□□□□□ -0.39
CDH3-204ENST00000565453 SERTAD4Q9NUC0 356 aa12.61□□□□□ -0.39
CDH3-204ENST00000565453 A0A0G2JK05 382 aa12.6□□□□□ -0.39
CDH3-204ENST00000565453 TMEM212A6NML5 194 aa12.6□□□□□ -0.39
CDH3-204ENST00000565453 FAM90A22PA8MWA6 464 aa12.6□□□□□ -0.39
CDH3-204ENST00000565453 SULT1B1O43704 296 aa12.6□□□□□ -0.39
CDH3-204ENST00000565453 OCM2P0CE71 109 aa12.6□□□□□ -0.39
CDH3-204ENST00000565453 OCMP0CE72 109 aaPredicted RBP12.6□□□□□ -0.39
CDH3-204ENST00000565453 GDNFP39905 211 aa12.6□□□□□ -0.39
CDH3-204ENST00000565453 GLIPR1P48060 266 aa12.6□□□□□ -0.39
CDH3-204ENST00000565453 HABP2Q14520 560 aaPredicted RBP12.6□□□□□ -0.39
CDH3-204ENST00000565453 CDK5R1Q15078 307 aa12.6□□□□□ -0.39
CDH3-204ENST00000565453 ZNF529Q6P280 563 aa12.6□□□□□ -0.39
CDH3-204ENST00000565453 SERPINA12Q8IW75 414 aa12.6□□□□□ -0.39
CDH3-204ENST00000565453 C11orf44Q8N8P7 122 aa12.6□□□□□ -0.39
CDH3-204ENST00000565453 DTX3Q8N9I9 347 aa12.6□□□□□ -0.39
CDH3-204ENST00000565453 OR5AK2Q8NH90 309 aa12.6□□□□□ -0.39
CDH3-204ENST00000565453 WIPF2Q8TF74 440 aaPredicted RBP12.6□□□□□ -0.39
CDH3-204ENST00000565453 COQ2Q96H96 371 aa12.6□□□□□ -0.39
CDH3-204ENST00000565453 PDCD1LG2Q9BQ51 273 aa12.6□□□□□ -0.39
CDH3-204ENST00000565453 JAM3Q9BX67 310 aa12.6□□□□□ -0.39
CDH3-204ENST00000565453 TAS2R3Q9NYW6 316 aa12.6□□□□□ -0.39
CDH3-204ENST00000565453 RPL36Q9Y3U8 105 aaKnown RBP12.6□□□□□ -0.39
CDH3-204ENST00000565453 HILPDAQ9Y5L2 63 aa12.6□□□□□ -0.39
CDH3-204ENST00000565453 SLC33A1O00400 549 aaPredicted RBP12.59□□□□□ -0.39
CDH3-204ENST00000565453 WBP4O75554 376 aaKnown RBP12.59□□□□□ -0.39
CDH3-204ENST00000565453 CSN2P05814 226 aa12.59□□□□□ -0.39
CDH3-204ENST00000565453 RPSAP08865 295 aaKnown RBP12.59□□□□□ -0.39
CDH3-204ENST00000565453 CCDC159P0C7I6 412 aa12.59□□□□□ -0.39
CDH3-204ENST00000565453 LIMS3P0CW19 117 aa12.59□□□□□ -0.39
CDH3-204ENST00000565453 LIMS4P0CW20 117 aa12.59□□□□□ -0.39
CDH3-204ENST00000565453 AESQ08117 197 aa12.59□□□□□ -0.39
CDH3-204ENST00000565453 IL18R1Q13478 541 aa12.59□□□□□ -0.39
CDH3-204ENST00000565453 KISS1Q15726 138 aa12.59□□□□□ -0.39
CDH3-204ENST00000565453 PRAMEF5Q5TYX0 476 aa12.59□□□□□ -0.39
CDH3-204ENST00000565453 LPCAT4Q643R3 524 aa12.59□□□□□ -0.39
CDH3-204ENST00000565453 HEPN1Q6WQI6 88 aa12.59□□□□□ -0.39
CDH3-204ENST00000565453 TRAPPC6BQ86SZ2 158 aa12.59□□□□□ -0.39
CDH3-204ENST00000565453 OR5D14Q8NGL3 314 aa12.59□□□□□ -0.39
CDH3-204ENST00000565453 RGP1Q92546 391 aaPredicted RBP12.59□□□□□ -0.39
CDH3-204ENST00000565453 NEK6Q9HC98 313 aa12.59□□□□□ -0.39
CDH3-204ENST00000565453 FGF20Q9NP95 211 aaPredicted RBP12.59□□□□□ -0.39
CDH3-204ENST00000565453 PITPNC1Q9UKF7 332 aa12.59□□□□□ -0.39
CDH3-204ENST00000565453 TRGV10A0A0A0MS01 117 aa12.58□□□□□ -0.4
CDH3-204ENST00000565453 ODAMA1E959 279 aa12.58□□□□□ -0.4
CDH3-204ENST00000565453 FUOMA2VDF0 154 aa12.58□□□□□ -0.4
CDH3-204ENST00000565453 HCKP08631 526 aa12.58□□□□□ -0.4
CDH3-204ENST00000565453 VSIG10L2P0DP72 767 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms