RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 ZNF92Q03936 586 aa7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 ST3GAL4Q11206 333 aa7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 SMN1Q16637 294 aaKnown RBP7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 ABCA11PQ4W5N1 156 aa7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 FDX2Q6P4F2 183 aa7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 PRSS45Q7RTY3 260 aa7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 FAM220AQ7Z4H9 259 aa7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 SATL1Q86VE3 508 aa7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 STX19Q8N4C7 294 aa7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 YIPF7Q8N8F6 280 aa7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 BPIFB6Q8NFQ5 453 aa7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 OR13D1Q8NGV5 346 aa7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 ANGPTL6Q8NI99 470 aa7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 SPSB4Q96A44 273 aa7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 AMELYQ99218 206 aa7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 OR10A2Q9H208 303 aa7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 LIN7BQ9HAP6 207 aa7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 ERVK13-1Q9NX77 482 aa7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 AASSQ9UDR5 926 aa7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 COPS3Q9UNS2 423 aa7.18□□□□□ -1.26
VPS9D1-205ENST00000565452 SLC1A7O00341 560 aa7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 LDLRAD4O15165 306 aa7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 MTRF1O75570 445 aaKnown RBP7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 ANXA2P07355 339 aaKnown RBP7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 FRMD6-AS1P0C7T7 363 aa7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 CCR9P51686 369 aa7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 CAPZA1P52907 286 aa7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 ZNF121P58317 390 aaPredicted RBP7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 RPL31P62899 125 aaKnown RBP7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 ZNF85Q03923 595 aa7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 TIGD6Q17RP2 521 aa7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 CCDC58Q4VC31 144 aa7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 FAM27D1Q5T7N8 215 aa7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 TMEM200BQ69YZ2 307 aa7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 LHFPL3Q86UP9 236 aa7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 CALHM1Q8IU99 346 aa7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 ZNF695Q8IW36 515 aa7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 FTMTQ8N4E7 242 aa7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 C11orf42Q8N5U0 333 aa7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 KLHL30-AS1Q8NEE0 82 aa7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 CSNK2A3Q8NEV1 391 aa7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 OR10Z1Q8NGY1 313 aa7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 PGAM5Q96HS1 289 aa7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 DUSP21Q9H596 190 aa7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 FKBP14Q9NWM8 211 aa7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 NUFIP1Q9UHK0 495 aaKnown RBP7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 MRM2Q9UI43 246 aaKnown RBP7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 MYRFQ9Y2G1 1151 aa7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 KLHDC2Q9Y2U9 406 aa7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 HILPDAQ9Y5L2 63 aa7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 R4GMQ9 66 aa7.17□□□□□ -1.26
VPS9D1-205ENST00000565452 OR2AT4A6NND4 320 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 DHRS7CA6NNS2 312 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 PTGES3LE9PB15 166 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 LOC110117498-PIK3R3F6TDL0 507 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 J3QLW9 94 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 SRSF10O75494 262 aaKnown RBP7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 CDK1P06493 297 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 HTR1AP08908 422 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 LIMS3P0CW19 117 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 LIMS4P0CW20 117 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 PGA5P0DJD9 388 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 ZNF19P17023 458 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 CRHBPP24387 322 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 GNALP38405 381 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 MAP2K3P46734 347 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 INSL3P51460 131 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 GBX2P52951 348 aaPredicted RBP7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 DYNC1I2Q13409 638 aaKnown RBP7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 C9orf152Q5JTZ5 239 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 TMEM244Q5VVB8 128 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 LAIR2Q6ISS4 152 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 Q6ZSR3 168 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 FAM57BQ71RH2 274 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 KRT74Q7RTS7 529 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 ZNF329Q86UD4 541 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 CATSPERDQ86XM0 798 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 ELMOD2Q8IZ81 293 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 ZNRF1Q8ND25 227 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 TMEM185AQ8NFB2 350 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 OR52N1Q8NH53 320 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 SGK3Q96BR1 496 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 C10orf35Q96D05 121 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 RAX2Q96IS3 184 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 LYZL4Q96KX0 146 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 CNBD2Q96M20 576 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 TBX5Q99593 518 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 MICU1Q9BPX6 476 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 TM2D3Q9BRN9 247 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 ALG8Q9BVK2 526 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 PBOV1Q9GZY1 135 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 WDR13Q9H1Z4 485 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 ELL3Q9HB65 397 aaPredicted RBP7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 ABCB9Q9NP78 766 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 C19orf12Q9NSK7 152 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 FAM206AQ9NX38 181 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 NLKQ9UBE8 527 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 GNG8Q9UK08 70 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 OR52A1Q9UKL2 312 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 ERGIC3Q9Y282 383 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms