RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 CFHR4Q92496 578 aa14.98□□□□□ -0.01
CLN6-204ENST00000564752 RANBP3Q9H6Z4 567 aaPredicted RBP14.98□□□□□ -0.01
CLN6-204ENST00000564752 GLS2Q9UI32 602 aa14.98□□□□□ -0.01
CLN6-204ENST00000564752 TMEM82A0PJX8 343 aa14.97□□□□□ -0.01
CLN6-204ENST00000564752 SULT1B1O43704 296 aa14.97□□□□□ -0.01
CLN6-204ENST00000564752 CALCBP10092 127 aa14.97□□□□□ -0.01
CLN6-204ENST00000564752 DCKP27707 260 aa14.97□□□□□ -0.01
CLN6-204ENST00000564752 DUSP1P28562 367 aa14.97□□□□□ -0.01
CLN6-204ENST00000564752 BMXP51813 675 aa14.97□□□□□ -0.01
CLN6-204ENST00000564752 LGALS4P56470 323 aa14.97□□□□□ -0.01
CLN6-204ENST00000564752 ZNF146Q15072 292 aa14.97□□□□□ -0.01
CLN6-204ENST00000564752 GRK1Q15835 563 aa14.97□□□□□ -0.01
CLN6-204ENST00000564752 ZNF782Q6ZMW2 699 aaPredicted RBP14.97□□□□□ -0.01
CLN6-204ENST00000564752 LIAT1Q6ZQX7 453 aa14.97□□□□□ -0.01
CLN6-204ENST00000564752 SERPINA12Q8IW75 414 aa14.97□□□□□ -0.01
CLN6-204ENST00000564752 OR5D14Q8NGL3 314 aa14.97□□□□□ -0.01
CLN6-204ENST00000564752 OR2T6Q8NHC8 308 aa14.97□□□□□ -0.01
CLN6-204ENST00000564752 CHST6Q9GZX3 395 aa14.97□□□□□ -0.01
CLN6-204ENST00000564752 SEBOXQ9HB31 216 aaPredicted RBP14.97□□□□□ -0.01
CLN6-204ENST00000564752 FOXJ3Q9UPW0 622 aa14.97□□□□□ -0.01
CLN6-204ENST00000564752 PCDHGB5Q9Y5G0 923 aa14.97□□□□□ -0.01
CLN6-204ENST00000564752 MEX3AA1L020 520 aaKnown RBP14.96□□□□□ -0.01
CLN6-204ENST00000564752 FAM90A8PA6NJQ4 464 aa14.96□□□□□ -0.01
CLN6-204ENST00000564752 C17orf98A8MV24 154 aa14.96□□□□□ -0.01
CLN6-204ENST00000564752 VGLL3A8MV65 326 aa14.96□□□□□ -0.01
CLN6-204ENST00000564752 MYL12AP19105 171 aa14.96□□□□□ -0.01
CLN6-204ENST00000564752 ETV1P50549 477 aa14.96□□□□□ -0.01
CLN6-204ENST00000564752 GTF2A1P52655 376 aaPredicted RBP14.96□□□□□ -0.01
CLN6-204ENST00000564752 DLX6P56179 175 aa14.96□□□□□ -0.01
CLN6-204ENST00000564752 TMPRSS11AQ6ZMR5 421 aa14.96□□□□□ -0.01
CLN6-204ENST00000564752 LHFPL4Q7Z7J7 247 aa14.96□□□□□ -0.01
CLN6-204ENST00000564752 DHRSXQ8N5I4 330 aa14.96□□□□□ -0.01
CLN6-204ENST00000564752 PARP16Q8N5Y8 322 aa14.96□□□□□ -0.01
CLN6-204ENST00000564752 KLHDC1Q8N7A1 406 aa14.96□□□□□ -0.01
CLN6-204ENST00000564752 NPFFR1Q9GZQ6 430 aa14.96□□□□□ -0.01
CLN6-204ENST00000564752 HMG20AQ9NP66 347 aa14.96□□□□□ -0.01
CLN6-204ENST00000564752 EXOSC4Q9NPD3 245 aaKnown RBP14.96□□□□□ -0.01
CLN6-204ENST00000564752 GSTK1Q9Y2Q3 226 aa14.96□□□□□ -0.01
CLN6-204ENST00000564752 IGKV1-12A0A0C4DH73 117 aa14.95□□□□□ -0.02
CLN6-204ENST00000564752 hADV38S2A0JD32 116 aa14.95□□□□□ -0.02
CLN6-204ENST00000564752 CHST1O43916 411 aa14.95□□□□□ -0.02
CLN6-204ENST00000564752 KDM4BO94953 1096 aa14.95□□□□□ -0.02
CLN6-204ENST00000564752 IGKV1D-12P01611 117 aa14.95□□□□□ -0.02
CLN6-204ENST00000564752 RBP4P02753 201 aa14.95□□□□□ -0.02
CLN6-204ENST00000564752 ZNF728P0DKX0 622 aa14.95□□□□□ -0.02
CLN6-204ENST00000564752 MEF2CQ06413 473 aaPredicted RBP14.95□□□□□ -0.02
CLN6-204ENST00000564752 CDK5R1Q15078 307 aa14.95□□□□□ -0.02
CLN6-204ENST00000564752 CCDC58Q4VC31 144 aa14.95□□□□□ -0.02
CLN6-204ENST00000564752 OR2G6Q5TZ20 316 aa14.95□□□□□ -0.02
CLN6-204ENST00000564752 HIST2H2BDQ6DRA6 164 aa14.95□□□□□ -0.02
CLN6-204ENST00000564752 RNF144BQ7Z419 303 aa14.95□□□□□ -0.02
CLN6-204ENST00000564752 SAXO1Q8IYX7 474 aa14.95□□□□□ -0.02
CLN6-204ENST00000564752 DYNAPQ8N1N2 210 aa14.95□□□□□ -0.02
CLN6-204ENST00000564752 C11orf44Q8N8P7 122 aa14.95□□□□□ -0.02
CLN6-204ENST00000564752 DTX3Q8N9I9 347 aa14.95□□□□□ -0.02
CLN6-204ENST00000564752 OR52N4Q8NGI2 321 aa14.95□□□□□ -0.02
CLN6-204ENST00000564752 CPNE2Q96FN4 548 aaPredicted RBP14.95□□□□□ -0.02
CLN6-204ENST00000564752 ZNF714Q96N38 554 aa14.95□□□□□ -0.02
CLN6-204ENST00000564752 DIMT1Q9UNQ2 313 aaKnown RBP14.95□□□□□ -0.02
CLN6-204ENST00000564752 EXOSC1Q9Y3B2 195 aaKnown RBP14.95□□□□□ -0.02
CLN6-204ENST00000564752 SIRPB1O00241 398 aa14.94□□□□□ -0.02
CLN6-204ENST00000564752 PSPNO60542 156 aa14.94□□□□□ -0.02
CLN6-204ENST00000564752 ALX3O95076 343 aa14.94□□□□□ -0.02
CLN6-204ENST00000564752 OPN1MWP04001 364 aa14.94□□□□□ -0.02
CLN6-204ENST00000564752 CD2P06729 351 aa14.94□□□□□ -0.02
CLN6-204ENST00000564752 OPN1MW2P0DN77 364 aa14.94□□□□□ -0.02
CLN6-204ENST00000564752 OPN1MW3P0DN78 364 aa14.94□□□□□ -0.02
CLN6-204ENST00000564752 TMEM225BP0DP42 221 aa14.94□□□□□ -0.02
CLN6-204ENST00000564752 SOX2P48431 317 aa14.94□□□□□ -0.02
CLN6-204ENST00000564752 ADARB1P78563 741 aaKnown RBP14.94□□□□□ -0.02
CLN6-204ENST00000564752 IL18R1Q13478 541 aa14.94□□□□□ -0.02
CLN6-204ENST00000564752 MED21Q13503 144 aa14.94□□□□□ -0.02
CLN6-204ENST00000564752 KISS1Q15726 138 aa14.94□□□□□ -0.02
CLN6-204ENST00000564752 XAF1Q6GPH4 301 aa14.94□□□□□ -0.02
CLN6-204ENST00000564752 RPL22L1Q6P5R6 122 aaKnown RBP14.94□□□□□ -0.02
CLN6-204ENST00000564752 TPRX1Q8N7U7 411 aa14.94□□□□□ -0.02
CLN6-204ENST00000564752 OR4S1Q8NGB4 309 aa14.94□□□□□ -0.02
CLN6-204ENST00000564752 GPR148Q8TDV2 347 aa14.94□□□□□ -0.02
CLN6-204ENST00000564752 RGP1Q92546 391 aaPredicted RBP14.94□□□□□ -0.02
CLN6-204ENST00000564752 RHOFQ9HBH0 211 aa14.94□□□□□ -0.02
CLN6-204ENST00000564752 LINC00312Q9Y6C7 94 aa14.94□□□□□ -0.02
CLN6-204ENST00000564752 G3V4G9 280 aa14.93□□□□□ -0.02
CLN6-204ENST00000564752 SH2D1BO14796 132 aa14.93□□□□□ -0.02
CLN6-204ENST00000564752 MGST3O14880 152 aa14.93□□□□□ -0.02
CLN6-204ENST00000564752 MAGEB3O15480 346 aa14.93□□□□□ -0.02
CLN6-204ENST00000564752 OR2H2O95918 312 aa14.93□□□□□ -0.02
CLN6-204ENST00000564752 RAB3AP20336 220 aa14.93□□□□□ -0.02
CLN6-204ENST00000564752 OR3A1P47881 315 aa14.93□□□□□ -0.02
CLN6-204ENST00000564752 RAB13P51153 203 aa14.93□□□□□ -0.02
CLN6-204ENST00000564752 ZP1P60852 638 aa14.93□□□□□ -0.02
CLN6-204ENST00000564752 TCF23Q7RTU1 214 aa14.93□□□□□ -0.02
CLN6-204ENST00000564752 OR13D1Q8NGV5 346 aa14.93□□□□□ -0.02
CLN6-204ENST00000564752 MALSU1Q96EH3 234 aa14.93□□□□□ -0.02
CLN6-204ENST00000564752 CDCA4Q9BXL8 241 aa14.93□□□□□ -0.02
CLN6-204ENST00000564752 CHCHD3Q9NX63 227 aaKnown RBP14.93□□□□□ -0.02
CLN6-204ENST00000564752 TBL2Q9Y4P3 447 aaKnown RBP14.93□□□□□ -0.02
CLN6-204ENST00000564752 HSPE1-MOB4S4R3N1 261 aa14.93□□□□□ -0.02
CLN6-204ENST00000564752 TET2Q6N021 2002 aaPredicted RBP14.93□□□□□ -0.02
CLN6-204ENST00000564752 ODF3BA8MYP8 253 aa14.92□□□□□ -0.02
CLN6-204ENST00000564752 ANKRD65E5RJM6 399 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms