RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 COMMD4Q9H0A8 199 aa13.85□□□□□ -0.19
VPS9D1-203ENST00000563798 ORC6Q9Y5N6 252 aa13.85□□□□□ -0.19
VPS9D1-203ENST00000563798 SH2D1BO14796 132 aa13.84□□□□□ -0.19
VPS9D1-203ENST00000563798 CSN2P05814 226 aa13.84□□□□□ -0.19
VPS9D1-203ENST00000563798 VSIG10L2P0DP72 767 aa13.84□□□□□ -0.19
VPS9D1-203ENST00000563798 DUSP1P28562 367 aa13.84□□□□□ -0.19
VPS9D1-203ENST00000563798 ALKBH1Q13686 389 aaKnown RBP13.84□□□□□ -0.19
VPS9D1-203ENST00000563798 PLA1AQ53H76 456 aa13.84□□□□□ -0.19
VPS9D1-203ENST00000563798 ZFP1Q6P2D0 407 aa13.84□□□□□ -0.19
VPS9D1-203ENST00000563798 HEPN1Q6WQI6 88 aa13.84□□□□□ -0.19
VPS9D1-203ENST00000563798 RTN4RL2Q86UN3 420 aa13.84□□□□□ -0.19
VPS9D1-203ENST00000563798 TMEM219Q86XT9 240 aa13.84□□□□□ -0.19
VPS9D1-203ENST00000563798 SYS1Q8N2H4 156 aa13.84□□□□□ -0.19
VPS9D1-203ENST00000563798 C11orf44Q8N8P7 122 aa13.84□□□□□ -0.19
VPS9D1-203ENST00000563798 OR4P4Q8NGL7 312 aa13.84□□□□□ -0.19
VPS9D1-203ENST00000563798 OR10AC1Q8NH08 325 aa13.84□□□□□ -0.19
VPS9D1-203ENST00000563798 EXOSC4Q9NPD3 245 aaKnown RBP13.84□□□□□ -0.19
VPS9D1-203ENST00000563798 TAS2R3Q9NYW6 316 aa13.84□□□□□ -0.19
VPS9D1-203ENST00000563798 FUOMA2VDF0 154 aa13.83□□□□□ -0.2
VPS9D1-203ENST00000563798 FBXO24O75426 580 aa13.83□□□□□ -0.2
VPS9D1-203ENST00000563798 MMP23AO75900 390 aa13.83□□□□□ -0.2
VPS9D1-203ENST00000563798 OR2H2O95918 312 aa13.83□□□□□ -0.2
VPS9D1-203ENST00000563798 HTR1DP28221 377 aa13.83□□□□□ -0.2
VPS9D1-203ENST00000563798 CD34P28906 385 aa13.83□□□□□ -0.2
VPS9D1-203ENST00000563798 BDH1Q02338 343 aa13.83□□□□□ -0.2
VPS9D1-203ENST00000563798 EMX1Q04741 257 aaPredicted RBP13.83□□□□□ -0.2
VPS9D1-203ENST00000563798 GALEQ14376 348 aa13.83□□□□□ -0.2
VPS9D1-203ENST00000563798 HABP2Q14520 560 aaPredicted RBP13.83□□□□□ -0.2
VPS9D1-203ENST00000563798 OR52W1Q6IF63 320 aa13.83□□□□□ -0.2
VPS9D1-203ENST00000563798 NDUFA11Q86Y39 141 aa13.83□□□□□ -0.2
VPS9D1-203ENST00000563798 C1QL4Q86Z23 238 aa13.83□□□□□ -0.2
VPS9D1-203ENST00000563798 CHST4Q8NCG5 386 aa13.83□□□□□ -0.2
VPS9D1-203ENST00000563798 OR51A4Q8NGJ6 313 aa13.83□□□□□ -0.2
VPS9D1-203ENST00000563798 LGALS12Q96DT0 336 aa13.83□□□□□ -0.2
VPS9D1-203ENST00000563798 MRPL48Q96GC5 212 aaKnown RBP13.83□□□□□ -0.2
VPS9D1-203ENST00000563798 C4orf36Q96KX1 117 aa13.83□□□□□ -0.2
VPS9D1-203ENST00000563798 ZNF649Q9BS31 505 aa13.83□□□□□ -0.2
VPS9D1-203ENST00000563798 GAL3ST2Q9H3Q3 398 aa13.83□□□□□ -0.2
VPS9D1-203ENST00000563798 NEK6Q9HC98 313 aa13.83□□□□□ -0.2
VPS9D1-203ENST00000563798 HILPDAQ9Y5L2 63 aa13.83□□□□□ -0.2
VPS9D1-203ENST00000563798 TRGV10A0A0A0MS01 117 aa13.82□□□□□ -0.2
VPS9D1-203ENST00000563798 J3QLW9 94 aa13.82□□□□□ -0.2
VPS9D1-203ENST00000563798 F2RL2O00254 374 aa13.82□□□□□ -0.2
VPS9D1-203ENST00000563798 IGLV1-47P01700 117 aa13.82□□□□□ -0.2
VPS9D1-203ENST00000563798 ZNF19P17023 458 aa13.82□□□□□ -0.2
VPS9D1-203ENST00000563798 MRPL28Q13084 256 aaKnown RBP13.82□□□□□ -0.2
VPS9D1-203ENST00000563798 IL18R1Q13478 541 aa13.82□□□□□ -0.2
VPS9D1-203ENST00000563798 Q6P435 159 aa13.82□□□□□ -0.2
VPS9D1-203ENST00000563798 C16orf82Q7Z2V1 217 aa13.82□□□□□ -0.2
VPS9D1-203ENST00000563798 RNF144BQ7Z419 303 aa13.82□□□□□ -0.2
VPS9D1-203ENST00000563798 PARP16Q8N5Y8 322 aa13.82□□□□□ -0.2
VPS9D1-203ENST00000563798 OR13C3Q8NGS6 347 aa13.82□□□□□ -0.2
VPS9D1-203ENST00000563798 OR13C9Q8NGT0 318 aa13.82□□□□□ -0.2
VPS9D1-203ENST00000563798 RHOXF1Q8NHV9 184 aa13.82□□□□□ -0.2
VPS9D1-203ENST00000563798 ZCCHC4Q9H5U6 513 aa13.82□□□□□ -0.2
VPS9D1-203ENST00000563798 INPP5EQ9NRR6 644 aa13.82□□□□□ -0.2
VPS9D1-203ENST00000563798 DPM3Q9P2X0 92 aa13.82□□□□□ -0.2
VPS9D1-203ENST00000563798 GSTK1Q9Y2Q3 226 aa13.82□□□□□ -0.2
VPS9D1-203ENST00000563798 PCDHGB5Q9Y5G0 923 aa13.82□□□□□ -0.2
VPS9D1-203ENST00000563798 A0A087X0M5 115 aa13.81□□□□□ -0.2
VPS9D1-203ENST00000563798 A0A1B0GX30 115 aa13.81□□□□□ -0.2
VPS9D1-203ENST00000563798 ADARB2-AS1A8MUL3 147 aa13.81□□□□□ -0.2
VPS9D1-203ENST00000563798 G3V4G9 280 aa13.81□□□□□ -0.2
VPS9D1-203ENST00000563798 H3BUI4 141 aa13.81□□□□□ -0.2
VPS9D1-203ENST00000563798 SIRPB1O00241 398 aa13.81□□□□□ -0.2
VPS9D1-203ENST00000563798 MPZL2O60487 215 aa13.81□□□□□ -0.2
VPS9D1-203ENST00000563798 ALDOBP05062 364 aa13.81□□□□□ -0.2
VPS9D1-203ENST00000563798 CALCBP10092 127 aa13.81□□□□□ -0.2
VPS9D1-203ENST00000563798 CD28P10747 220 aa13.81□□□□□ -0.2
VPS9D1-203ENST00000563798 DBTP11182 482 aaKnown RBP13.81□□□□□ -0.2
VPS9D1-203ENST00000563798 JUNBP17275 347 aaPredicted RBP13.81□□□□□ -0.2
VPS9D1-203ENST00000563798 ZP1P60852 638 aa13.81□□□□□ -0.2
VPS9D1-203ENST00000563798 BLCAPP62952 87 aa13.81□□□□□ -0.2
VPS9D1-203ENST00000563798 SLC34A1Q06495 639 aa13.81□□□□□ -0.2
VPS9D1-203ENST00000563798 ZIK1Q3SY52 487 aaPredicted RBP13.81□□□□□ -0.2
VPS9D1-203ENST00000563798 HIST2H2BDQ6DRA6 164 aa13.81□□□□□ -0.2
VPS9D1-203ENST00000563798 Q6ZS46 218 aa13.81□□□□□ -0.2
VPS9D1-203ENST00000563798 TRAPPC6BQ86SZ2 158 aa13.81□□□□□ -0.2
VPS9D1-203ENST00000563798 ABHD12Q8N2K0 398 aa13.81□□□□□ -0.2
VPS9D1-203ENST00000563798 CBR4Q8N4T8 237 aa13.81□□□□□ -0.2
VPS9D1-203ENST00000563798 NDNFQ8TB73 568 aa13.81□□□□□ -0.2
VPS9D1-203ENST00000563798 ZNF596Q8TC21 504 aa13.81□□□□□ -0.2
VPS9D1-203ENST00000563798 RFT1Q96AA3 541 aa13.81□□□□□ -0.2
VPS9D1-203ENST00000563798 OCSTAMPQ9BR26 566 aa13.81□□□□□ -0.2
VPS9D1-203ENST00000563798 MRPS18AQ9NVS2 196 aaKnown RBP13.81□□□□□ -0.2
VPS9D1-203ENST00000563798 FADS2O95864 444 aaKnown RBP13.8□□□□□ -0.2
VPS9D1-203ENST00000563798 OCM2P0CE71 109 aa13.8□□□□□ -0.2
VPS9D1-203ENST00000563798 OCMP0CE72 109 aaPredicted RBP13.8□□□□□ -0.2
VPS9D1-203ENST00000563798 CDK2P24941 298 aa13.8□□□□□ -0.2
VPS9D1-203ENST00000563798 GLIPR1P48060 266 aa13.8□□□□□ -0.2
VPS9D1-203ENST00000563798 SNU13P55769 128 aaKnown RBP13.8□□□□□ -0.2
VPS9D1-203ENST00000563798 RAB40BQ12829 278 aa13.8□□□□□ -0.2
VPS9D1-203ENST00000563798 KPNB1Q14974 876 aaKnown RBP13.8□□□□□ -0.2
VPS9D1-203ENST00000563798 ELP2Q6IA86 826 aa13.8□□□□□ -0.2
VPS9D1-203ENST00000563798 SERPINA12Q8IW75 414 aa13.8□□□□□ -0.2
VPS9D1-203ENST00000563798 C10orf67Q8IYJ2 551 aa13.8□□□□□ -0.2
VPS9D1-203ENST00000563798 OR5D14Q8NGL3 314 aa13.8□□□□□ -0.2
VPS9D1-203ENST00000563798 HAVCR2Q8TDQ0 301 aa13.8□□□□□ -0.2
VPS9D1-203ENST00000563798 Q96MT0 163 aa13.8□□□□□ -0.2
VPS9D1-203ENST00000563798 SPACA5Q96QH8 159 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms