RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 ACP7Q6ZNF0 438 aa18.52■□□□□ 0.55
LINC01960-201ENST00000563759 NEK7Q8TDX7 302 aa18.52■□□□□ 0.55
LINC01960-201ENST00000563759 DYRK2Q92630 601 aa18.52■□□□□ 0.55
LINC01960-201ENST00000563759 CMSS1Q9BQ75 279 aaKnown RBP18.52■□□□□ 0.55
LINC01960-201ENST00000563759 SAP30LQ9HAJ7 183 aa18.52■□□□□ 0.55
LINC01960-201ENST00000563759 ZNF701Q9NV72 531 aaPredicted RBP18.52■□□□□ 0.55
LINC01960-201ENST00000563759 MCUBQ9NWR8 336 aa18.52■□□□□ 0.55
LINC01960-201ENST00000563759 OR14J1Q9UGF5 321 aa18.52■□□□□ 0.55
LINC01960-201ENST00000563759 LRBAP50851 2863 aa18.51■□□□□ 0.55
LINC01960-201ENST00000563759 AKAIN1P0CW23 69 aa18.51■□□□□ 0.55
LINC01960-201ENST00000563759 SPNP16150 400 aa18.51■□□□□ 0.55
LINC01960-201ENST00000563759 ZNF146Q15072 292 aa18.51■□□□□ 0.55
LINC01960-201ENST00000563759 MST1LQ2TV78 715 aa18.51■□□□□ 0.55
LINC01960-201ENST00000563759 FAAP20Q6NZ36 180 aa18.51■□□□□ 0.55
LINC01960-201ENST00000563759 CCBE1Q6UXH8 406 aaPredicted RBP18.51■□□□□ 0.55
LINC01960-201ENST00000563759 BOLLQ8N9W6 283 aaKnown RBP18.51■□□□□ 0.55
LINC01960-201ENST00000563759 DEDD2Q8WXF8 326 aa18.51■□□□□ 0.55
LINC01960-201ENST00000563759 ERGIC1Q969X5 290 aa18.51■□□□□ 0.55
LINC01960-201ENST00000563759 HRASLSQ9HDD0 168 aa18.51■□□□□ 0.55
LINC01960-201ENST00000563759 RALYQ9UKM9 306 aaKnown RBP18.51■□□□□ 0.55
LINC01960-201ENST00000563759 PPP1R3CQ9UQK1 317 aa18.51■□□□□ 0.55
LINC01960-201ENST00000563759 SRRM5B3KS81 715 aa18.5■□□□□ 0.55
LINC01960-201ENST00000563759 ZNF736B4DX44 427 aaPredicted RBP18.5■□□□□ 0.55
LINC01960-201ENST00000563759 DEGS1O15121 323 aa18.5■□□□□ 0.55
LINC01960-201ENST00000563759 CD3DP04234 171 aa18.5■□□□□ 0.55
LINC01960-201ENST00000563759 HLA-DMAP28067 261 aa18.5■□□□□ 0.55
LINC01960-201ENST00000563759 CFHR2P36980 270 aa18.5■□□□□ 0.55
LINC01960-201ENST00000563759 OR4S1Q8NGB4 309 aa18.5■□□□□ 0.55
LINC01960-201ENST00000563759 HDHD3Q9BSH5 251 aaPredicted RBP18.5■□□□□ 0.55
LINC01960-201ENST00000563759 FAIMQ9NVQ4 179 aa18.5■□□□□ 0.55
LINC01960-201ENST00000563759 GLS2Q9UI32 602 aa18.5■□□□□ 0.55
LINC01960-201ENST00000563759 ZNF107Q9UII5 783 aaPredicted RBP18.5■□□□□ 0.55
LINC01960-201ENST00000563759 RAI1Q7Z5J4 1906 aaPredicted RBP18.5■□□□□ 0.55
LINC01960-201ENST00000563759 NAP1L6A6NFF2 107 aa18.5■□□□□ 0.55
LINC01960-201ENST00000563759 MCRIP1C9JLW8 97 aa18.5■□□□□ 0.55
LINC01960-201ENST00000563759 HS3ST1O14792 307 aa18.5■□□□□ 0.55
LINC01960-201ENST00000563759 SH2D1BO14796 132 aa18.5■□□□□ 0.55
LINC01960-201ENST00000563759 RBMXP38159 391 aaKnown RBP18.5■□□□□ 0.55
LINC01960-201ENST00000563759 SWI5Q1ZZU3 235 aa18.5■□□□□ 0.55
LINC01960-201ENST00000563759 OR52W1Q6IF63 320 aa18.5■□□□□ 0.55
LINC01960-201ENST00000563759 STEAP1BQ6NZ63 245 aa18.5■□□□□ 0.55
LINC01960-201ENST00000563759 Q6ZNX1 250 aa18.5■□□□□ 0.55
LINC01960-201ENST00000563759 GCSAMQ8N6F7 178 aa18.5■□□□□ 0.55
LINC01960-201ENST00000563759 TMEM229BQ8NBD8 167 aa18.5■□□□□ 0.55
LINC01960-201ENST00000563759 SUMF2Q8NBJ7 301 aa18.5■□□□□ 0.55
LINC01960-201ENST00000563759 OR4C16Q8NGL9 310 aa18.5■□□□□ 0.55
LINC01960-201ENST00000563759 OR11L1Q8NGX0 322 aa18.5■□□□□ 0.55
LINC01960-201ENST00000563759 RDH5Q92781 318 aa18.5■□□□□ 0.55
LINC01960-201ENST00000563759 COL12A1Q99715 3063 aa18.5■□□□□ 0.55
LINC01960-201ENST00000563759 OCSTAMPQ9BR26 566 aa18.5■□□□□ 0.55
LINC01960-201ENST00000563759 IFT22Q9H7X7 185 aa18.5■□□□□ 0.55
LINC01960-201ENST00000563759 C12orf4Q9NQ89 552 aa18.5■□□□□ 0.55
LINC01960-201ENST00000563759 RASL12Q9NYN1 266 aa18.5■□□□□ 0.55
LINC01960-201ENST00000563759 NLKQ9UBE8 527 aa18.5■□□□□ 0.55
LINC01960-201ENST00000563759 DNAJB11Q9UBS4 358 aa18.5■□□□□ 0.55
LINC01960-201ENST00000563759 NPTNQ9Y639 398 aa18.5■□□□□ 0.55
LINC01960-201ENST00000563759 hCG_2014768A0A024R1R8 64 aa18.49■□□□□ 0.55
LINC01960-201ENST00000563759 SIRPB1O00241 398 aa18.49■□□□□ 0.55
LINC01960-201ENST00000563759 OR2H2O95918 312 aa18.49■□□□□ 0.55
LINC01960-201ENST00000563759 HAND1O96004 215 aa18.49■□□□□ 0.55
LINC01960-201ENST00000563759 IRF2P14316 349 aa18.49■□□□□ 0.55
LINC01960-201ENST00000563759 EGR1P18146 543 aa18.49■□□□□ 0.55
LINC01960-201ENST00000563759 SLC6A1P30531 599 aa18.49■□□□□ 0.55
LINC01960-201ENST00000563759 BTCP35070 178 aa18.49■□□□□ 0.55
LINC01960-201ENST00000563759 PMELP40967 661 aa18.49■□□□□ 0.55
LINC01960-201ENST00000563759 ST6GALNAC5Q9BVH7 336 aa18.49■□□□□ 0.55
LINC01960-201ENST00000563759 TREM2Q9NZC2 230 aa18.49■□□□□ 0.55
LINC01960-201ENST00000563759 RNF7Q9UBF6 113 aa18.49■□□□□ 0.55
LINC01960-201ENST00000563759 ZNF230Q9UIE0 474 aaPredicted RBP18.49■□□□□ 0.55
LINC01960-201ENST00000563759 KLF2Q9Y5W3 355 aaPredicted RBP18.49■□□□□ 0.55
LINC01960-201ENST00000563759 KNG1P01042 644 aa18.48■□□□□ 0.55
LINC01960-201ENST00000563759 Q6P435 159 aa18.48■□□□□ 0.55
LINC01960-201ENST00000563759 DPCDQ9BVM2 203 aaPredicted RBP18.48■□□□□ 0.55
LINC01960-201ENST00000563759 LRRK2Q5S007 2527 aa18.48■□□□□ 0.55
LINC01960-201ENST00000563759 TRAV24A0A0B4J272 114 aa18.48■□□□□ 0.55
LINC01960-201ENST00000563759 GIFP27352 417 aa18.48■□□□□ 0.55
LINC01960-201ENST00000563759 CEBPDP49716 269 aaPredicted RBP18.48■□□□□ 0.55
LINC01960-201ENST00000563759 RBM39Q14498 530 aaKnown RBP18.48■□□□□ 0.55
LINC01960-201ENST00000563759 PAN3Q58A45 887 aaKnown RBP18.48■□□□□ 0.55
LINC01960-201ENST00000563759 PLET1Q6UQ28 207 aa18.48■□□□□ 0.55
LINC01960-201ENST00000563759 GLCCI1Q86VQ1 547 aa18.48■□□□□ 0.55
LINC01960-201ENST00000563759 BPIFB2Q8N4F0 458 aa18.48■□□□□ 0.55
LINC01960-201ENST00000563759 Q8TCH9 128 aa18.48■□□□□ 0.55
LINC01960-201ENST00000563759 MAFIPQ8WZ33 124 aa18.48■□□□□ 0.55
LINC01960-201ENST00000563759 HPS1Q92902 700 aa18.48■□□□□ 0.55
LINC01960-201ENST00000563759 DPAGT1Q9H3H5 408 aa18.48■□□□□ 0.55
LINC01960-201ENST00000563759 CHMP1AQ9HD42 196 aaPredicted RBP18.48■□□□□ 0.55
LINC01960-201ENST00000563759 ANAPC10Q9UM13 185 aa18.48■□□□□ 0.55
LINC01960-201ENST00000563759 PLEKHA6Q9Y2H5 1048 aa18.48■□□□□ 0.55
LINC01960-201ENST00000563759 DSCAMO60469 2012 aa18.47■□□□□ 0.55
LINC01960-201ENST00000563759 FAM221AA4D161 298 aa18.47■□□□□ 0.55
LINC01960-201ENST00000563759 A6NNC1 897 aa18.47■□□□□ 0.55
LINC01960-201ENST00000563759 RAB3DO95716 219 aa18.47■□□□□ 0.55
LINC01960-201ENST00000563759 AMY2BP19961 511 aa18.47■□□□□ 0.55
LINC01960-201ENST00000563759 BEST4Q8NFU0 473 aa18.47■□□□□ 0.55
LINC01960-201ENST00000563759 OR4D10Q8NGI6 311 aa18.47■□□□□ 0.55
LINC01960-201ENST00000563759 SNAPC3Q92966 411 aa18.47■□□□□ 0.55
LINC01960-201ENST00000563759 VRK1Q99986 396 aaPredicted RBP18.47■□□□□ 0.55
LINC01960-201ENST00000563759 MMP28Q9H239 520 aa18.47■□□□□ 0.55
LINC01960-201ENST00000563759 LRRC30A6NM36 301 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms