RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 C5orf56Q8N8D9 126 aa8.12□□□□□ -1.11
SF3B3-204ENST00000563739 ASCC1Q8N9N2 400 aaKnown RBP8.12□□□□□ -1.11
SF3B3-204ENST00000563739 Q8NFD4 153 aa8.12□□□□□ -1.11
SF3B3-204ENST00000563739 BBS1Q8NFJ9 593 aa8.12□□□□□ -1.11
SF3B3-204ENST00000563739 OR51E1Q8TCB6 317 aa8.12□□□□□ -1.11
SF3B3-204ENST00000563739 CITED4Q96RK1 184 aa8.12□□□□□ -1.11
SF3B3-204ENST00000563739 CIB1Q99828 191 aa8.12□□□□□ -1.11
SF3B3-204ENST00000563739 OSBPL10Q9BXB5 764 aa8.12□□□□□ -1.11
SF3B3-204ENST00000563739 SLC25A19Q9HC21 320 aa8.12□□□□□ -1.11
SF3B3-204ENST00000563739 GPR84Q9NQS5 396 aa8.12□□□□□ -1.11
SF3B3-204ENST00000563739 MTCH1Q9NZJ7 389 aa8.12□□□□□ -1.11
SF3B3-204ENST00000563739 DPM3Q9P2X0 92 aa8.12□□□□□ -1.11
SF3B3-204ENST00000563739 COPS3Q9UNS2 423 aa8.12□□□□□ -1.11
SF3B3-204ENST00000563739 A0A1W2PPI3 338 aa8.11□□□□□ -1.11
SF3B3-204ENST00000563739 H0YJX3 145 aa8.11□□□□□ -1.11
SF3B3-204ENST00000563739 CCL24O00175 119 aa8.11□□□□□ -1.11
SF3B3-204ENST00000563739 PSMD9O00233 223 aa8.11□□□□□ -1.11
SF3B3-204ENST00000563739 EI24O14681 340 aa8.11□□□□□ -1.11
SF3B3-204ENST00000563739 DENRO43583 198 aaKnown RBP8.11□□□□□ -1.11
SF3B3-204ENST00000563739 RPLP1P05386 114 aaKnown RBP8.11□□□□□ -1.11
SF3B3-204ENST00000563739 ALOX5APP20292 161 aa8.11□□□□□ -1.11
SF3B3-204ENST00000563739 ECI1P42126 302 aa8.11□□□□□ -1.11
SF3B3-204ENST00000563739 OR3A1P47881 315 aa8.11□□□□□ -1.11
SF3B3-204ENST00000563739 CRISP1P54107 249 aa8.11□□□□□ -1.11
SF3B3-204ENST00000563739 ESRRGP62508 458 aa8.11□□□□□ -1.11
SF3B3-204ENST00000563739 DIAPH2-AS1Q14236 149 aa8.11□□□□□ -1.11
SF3B3-204ENST00000563739 EDDM3AQ14507 147 aa8.11□□□□□ -1.11
SF3B3-204ENST00000563739 HLA-DRB5Q30154 266 aa8.11□□□□□ -1.11
SF3B3-204ENST00000563739 TPTE2P1Q5T6R2 138 aa8.11□□□□□ -1.11
SF3B3-204ENST00000563739 SHFQ7M4L6 423 aa8.11□□□□□ -1.11
SF3B3-204ENST00000563739 ZNF695Q8IW36 515 aa8.11□□□□□ -1.11
SF3B3-204ENST00000563739 NR1H4Q96RI1 486 aaPredicted RBP8.11□□□□□ -1.11
SF3B3-204ENST00000563739 GABARAPL3Q9BY60 117 aa8.11□□□□□ -1.11
SF3B3-204ENST00000563739 CHST6Q9GZX3 395 aa8.11□□□□□ -1.11
SF3B3-204ENST00000563739 VCXQ9H320 206 aa8.11□□□□□ -1.11
SF3B3-204ENST00000563739 ENOPH1Q9UHY7 261 aa8.11□□□□□ -1.11
SF3B3-204ENST00000563739 RAB26Q9ULW5 256 aa8.11□□□□□ -1.11
SF3B3-204ENST00000563739 PIGLQ9Y2B2 252 aa8.11□□□□□ -1.11
SF3B3-204ENST00000563739 MOB4Q9Y3A3 225 aa8.11□□□□□ -1.11
SF3B3-204ENST00000563739 HSPE1-MOB4S4R3N1 261 aa8.11□□□□□ -1.11
SF3B3-204ENST00000563739 V9GYS6 101 aa8.11□□□□□ -1.11
SF3B3-204ENST00000563739 ABCA13Q86UQ4 5058 aa8.1□□□□□ -1.11
SF3B3-204ENST00000563739 NRASP01111 189 aa8.1□□□□□ -1.11
SF3B3-204ENST00000563739 HMGN1P05114 100 aa8.1□□□□□ -1.11
SF3B3-204ENST00000563739 ALPLP05186 524 aa8.1□□□□□ -1.11
SF3B3-204ENST00000563739 EPHA2P29317 976 aa8.1□□□□□ -1.11
SF3B3-204ENST00000563739 SLC6A1P30531 599 aa8.1□□□□□ -1.11
SF3B3-204ENST00000563739 HSPA13P48723 471 aa8.1□□□□□ -1.11
SF3B3-204ENST00000563739 ALDH3A2P51648 485 aa8.1□□□□□ -1.11
SF3B3-204ENST00000563739 GTF2A1P52655 376 aaPredicted RBP8.1□□□□□ -1.11
SF3B3-204ENST00000563739 BLVRAP53004 296 aa8.1□□□□□ -1.11
SF3B3-204ENST00000563739 CDK5Q00535 292 aa8.1□□□□□ -1.11
SF3B3-204ENST00000563739 CFHR3Q02985 330 aa8.1□□□□□ -1.11
SF3B3-204ENST00000563739 ZNF91Q05481 1191 aa8.1□□□□□ -1.11
SF3B3-204ENST00000563739 IL24Q13007 206 aa8.1□□□□□ -1.11
SF3B3-204ENST00000563739 C9orf152Q5JTZ5 239 aa8.1□□□□□ -1.11
SF3B3-204ENST00000563739 TMEM236Q5W0B7 351 aa8.1□□□□□ -1.11
SF3B3-204ENST00000563739 UNQ9370/PRO34162Q6UXP9 181 aa8.1□□□□□ -1.11
SF3B3-204ENST00000563739 OVCH2Q7RTZ1 564 aa8.1□□□□□ -1.11
SF3B3-204ENST00000563739 CBR4Q8N4T8 237 aa8.1□□□□□ -1.11
SF3B3-204ENST00000563739 RNF152Q8N8N0 203 aa8.1□□□□□ -1.11
SF3B3-204ENST00000563739 OR14K1Q8NGZ2 314 aa8.1□□□□□ -1.11
SF3B3-204ENST00000563739 FAM81AQ8TBF8 368 aa8.1□□□□□ -1.11
SF3B3-204ENST00000563739 EME1Q96AY2 570 aa8.1□□□□□ -1.11
SF3B3-204ENST00000563739 SNX22Q96L94 193 aa8.1□□□□□ -1.11
SF3B3-204ENST00000563739 HIST1H2AAQ96QV6 131 aa8.1□□□□□ -1.11
SF3B3-204ENST00000563739 C9orf16Q9BUW7 83 aa8.1□□□□□ -1.11
SF3B3-204ENST00000563739 TEX12Q9BXU0 123 aa8.1□□□□□ -1.11
SF3B3-204ENST00000563739 PKIBQ9C010 78 aa8.1□□□□□ -1.11
SF3B3-204ENST00000563739 PBOV1Q9GZY1 135 aa8.1□□□□□ -1.11
SF3B3-204ENST00000563739 C8orf4Q9NR00 106 aa8.1□□□□□ -1.11
SF3B3-204ENST00000563739 ZFP57Q9NU63 452 aa8.1□□□□□ -1.11
SF3B3-204ENST00000563739 NUFIP1Q9UHK0 495 aaKnown RBP8.1□□□□□ -1.11
SF3B3-204ENST00000563739 ZNF256Q9Y2P7 627 aaPredicted RBP8.1□□□□□ -1.11
SF3B3-204ENST00000563739 CCDC182A6NF36 153 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 A6NIN4 97 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 ZAR1LA6NP61 321 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 NUDT19A8MXV4 375 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 SEC14L6B5MCN3 397 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 DHRS3O75911 302 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 IGHG2P01859 326 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 HCKP08631 526 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 FRMD6-AS1P0C7T7 363 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 ATP6V1B1P15313 513 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 RIPPLY1Q0D2K3 151 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 IL18R1Q13478 541 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 MED21Q13503 144 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 PTGES3Q15185 160 aaKnown RBP8.09□□□□□ -1.11
SF3B3-204ENST00000563739 SNAPC1Q16533 368 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 C9orf66Q5T8R8 295 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 SLX4IPQ5VYV7 408 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 HEPN1Q6WQI6 88 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 ZNF573Q86YE8 665 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 ABHD12Q8N2K0 398 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 STPG2Q8N412 459 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 PACRGLQ8N7B6 248 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 MYOZ3Q8TDC0 251 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 THEM6Q8WUY1 208 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 AKR1E2Q96JD6 320 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 SLC29A1Q99808 456 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms