RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 CD80P33681 288 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 DCDC5Q6ZRR9 648 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 SUMF2Q8NBJ7 301 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 C19orf18Q8NEA5 215 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 DYRK2Q92630 601 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 CACNG6Q9BXT2 260 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 PLEKHF2Q9H8W4 249 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 SCPEP1Q9HB40 452 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 MTFP1Q9UDX5 166 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 OR14J1Q9UGF5 321 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 AK3Q9UIJ7 227 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 FBXO9Q9UK97 447 aaPredicted RBP8.54□□□□□ -1.04
SMG1-208ENST00000563448 TBC1D24Q9ULP9 559 aa8.54□□□□□ -1.04
SMG1-208ENST00000563448 DOCK11Q5JSL3 2073 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 IGHV3OR15-7A0A075B7D8 119 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 TRAV24A0A0B4J272 114 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 LINC00854A0A1B0GVQ3 168 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 UBE2QL1A1L167 161 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 SERPINE3A8MV23 424 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 SIRPB1O00241 398 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 DEGS1O15121 323 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 PLA2G10O15496 165 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 CA11O75493 328 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 RBBP9O75884 186 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 HAND1O96004 215 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 KNG1P01042 644 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 LPLP06858 475 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 COX6B1P14854 86 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 GNG2P59768 71 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 ARFRP1Q13795 201 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 ARL6IP1Q15041 203 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 SMIM21Q3B7S5 101 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 ZNF57Q68EA5 555 aaPredicted RBP8.53□□□□□ -1.04
SMG1-208ENST00000563448 FIP1L1Q6UN15 594 aaKnown RBP8.53□□□□□ -1.04
SMG1-208ENST00000563448 TRAPPC6BQ86SZ2 158 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 OR5T2Q8NGG2 359 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 NLKQ9UBE8 527 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 PLEKHA6Q9Y2H5 1048 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 NPTNQ9Y639 398 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 LRBAP50851 2863 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 ISPDA4D126 451 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 RFPL4AA6NLU0 287 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 RFPL4AL1F8VTS6 287 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 TMEM178BH3BS89 294 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 SLC33A1O00400 549 aaPredicted RBP8.53□□□□□ -1.04
SMG1-208ENST00000563448 SH2D1BO14796 132 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 ZNF205O95201 554 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 FCER2P06734 321 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 PSG2P11465 335 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 IRF2P14316 349 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 ZNF44P15621 663 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 COL8A2P25067 703 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 LMO1P25800 156 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 KLF9Q13886 244 aaPredicted RBP8.53□□□□□ -1.04
SMG1-208ENST00000563448 SFRP4Q6FHJ7 346 aaPredicted RBP8.53□□□□□ -1.04
SMG1-208ENST00000563448 FAM90A1Q86YD7 464 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 BPIFB2Q8N4F0 458 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 TOMM5Q8N4H5 51 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 CD177Q8N6Q3 437 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 GVQW1Q8N7I0 195 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 RDH5Q92781 318 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 HPS1Q92902 700 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 HDHD3Q9BSH5 251 aaPredicted RBP8.53□□□□□ -1.04
SMG1-208ENST00000563448 RAB1BQ9H0U4 201 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 CLEC4MQ9H2X3 399 aaPredicted RBP8.53□□□□□ -1.04
SMG1-208ENST00000563448 TMEM106BQ9NUM4 274 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 DNAJB11Q9UBS4 358 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 METRNQ9UJH8 293 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 WIPI2Q9Y4P8 454 aa8.53□□□□□ -1.04
SMG1-208ENST00000563448 IGKV1D-17A0A075B6S4 117 aa8.52□□□□□ -1.05
SMG1-208ENST00000563448 IGHV1-69-2A0A0G2JMI3 117 aa8.52□□□□□ -1.05
SMG1-208ENST00000563448 A0A1B0GVG6 124 aa8.52□□□□□ -1.05
SMG1-208ENST00000563448 ANKRD20A5PA0PJZ0 165 aa8.52□□□□□ -1.05
SMG1-208ENST00000563448 LRRC30A6NM36 301 aa8.52□□□□□ -1.05
SMG1-208ENST00000563448 OR2AT4A6NND4 320 aa8.52□□□□□ -1.05
SMG1-208ENST00000563448 HSPB6O14558 160 aa8.52□□□□□ -1.05
SMG1-208ENST00000563448 COL8A1P27658 744 aa8.52□□□□□ -1.05
SMG1-208ENST00000563448 CDKN1AP38936 164 aa8.52□□□□□ -1.05
SMG1-208ENST00000563448 INPP1P49441 399 aa8.52□□□□□ -1.05
SMG1-208ENST00000563448 SSBP1Q04837 148 aaKnown RBP8.52□□□□□ -1.05
SMG1-208ENST00000563448 TEX36Q5VZQ5 186 aa8.52□□□□□ -1.05
SMG1-208ENST00000563448 ZNF295-AS1Q8N0V1 137 aa8.52□□□□□ -1.05
SMG1-208ENST00000563448 CCL17Q92583 94 aa8.52□□□□□ -1.05
SMG1-208ENST00000563448 DPCDQ9BVM2 203 aaPredicted RBP8.52□□□□□ -1.05
SMG1-208ENST00000563448 SEBOXQ9HB31 216 aaPredicted RBP8.52□□□□□ -1.05
SMG1-208ENST00000563448 SPACA1Q9HBV2 294 aa8.52□□□□□ -1.05
SMG1-208ENST00000563448 ANAPC10Q9UM13 185 aa8.52□□□□□ -1.05
SMG1-208ENST00000563448 MCRIP1C9JLW8 97 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 LYNX1G3V0Z9 82 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 H3BUI4 141 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 GLAP06280 429 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 LYNX1P0DP58 116 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 AMY2BP19961 511 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 PRDX2P32119 198 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 COL10A1Q03692 680 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 ASAH1Q13510 395 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 Q6ZPA2 131 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 POC5Q8NA72 575 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 CMSS1Q9BQ75 279 aaKnown RBP8.51□□□□□ -1.05
SMG1-208ENST00000563448 OCSTAMPQ9BR26 566 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms