RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 CADM2Q8N3J6 435 aa3.72□□□□□ -1.81
LINC00254-201ENST00000563416 CNEP1R1Q8N9A8 125 aa3.72□□□□□ -1.81
LINC00254-201ENST00000563416 ATP6V1C2Q8NEY4 427 aa3.72□□□□□ -1.81
LINC00254-201ENST00000563416 OR4C5Q8NGB2 326 aa3.72□□□□□ -1.81
LINC00254-201ENST00000563416 OR4D11Q8NGI4 311 aa3.72□□□□□ -1.81
LINC00254-201ENST00000563416 OR6T1Q8NGN1 323 aa3.72□□□□□ -1.81
LINC00254-201ENST00000563416 PIGXQ8TBF5 258 aa3.72□□□□□ -1.81
LINC00254-201ENST00000563416 TSEN15Q8WW01 171 aaKnown RBP3.72□□□□□ -1.81
LINC00254-201ENST00000563416 RASSF5Q8WWW0 418 aa3.72□□□□□ -1.81
LINC00254-201ENST00000563416 SLC38A4Q969I6 547 aa3.72□□□□□ -1.81
LINC00254-201ENST00000563416 DDIT4LQ96D03 193 aa3.72□□□□□ -1.81
LINC00254-201ENST00000563416 CMTM5Q96DZ9 223 aa3.72□□□□□ -1.81
LINC00254-201ENST00000563416 ZHX1-C8orf76Q96EF9 292 aa3.72□□□□□ -1.81
LINC00254-201ENST00000563416 CITED1Q99966 193 aa3.72□□□□□ -1.81
LINC00254-201ENST00000563416 HOPXQ9BPY8 73 aaPredicted RBP3.72□□□□□ -1.81
LINC00254-201ENST00000563416 ECSITQ9BQ95 431 aa3.72□□□□□ -1.81
LINC00254-201ENST00000563416 ZNF426Q9BUY5 554 aa3.72□□□□□ -1.81
LINC00254-201ENST00000563416 FAM107BQ9H098 131 aa3.72□□□□□ -1.81
LINC00254-201ENST00000563416 OPN3Q9H1Y3 402 aaPredicted RBP3.72□□□□□ -1.81
LINC00254-201ENST00000563416 CMTM6Q9NX76 183 aa3.72□□□□□ -1.81
LINC00254-201ENST00000563416 KLHL28Q9NXS3 571 aa3.72□□□□□ -1.81
LINC00254-201ENST00000563416 THYN1Q9P016 225 aa3.72□□□□□ -1.81
LINC00254-201ENST00000563416 SEC14L4Q9UDX3 406 aa3.72□□□□□ -1.81
LINC00254-201ENST00000563416 POLDIP2Q9Y2S7 368 aa3.72□□□□□ -1.81
LINC00254-201ENST00000563416 RTTNQ86VV8 2226 aa3.72□□□□□ -1.81
LINC00254-201ENST00000563416 TANC2Q9HCD6 1990 aa3.72□□□□□ -1.81
LINC00254-201ENST00000563416 FLNAP21333 2647 aaKnown RBP3.72□□□□□ -1.81
LINC00254-201ENST00000563416 TRBV7-9A0A0J9YWB2 115 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 LOC102725191A0A1B0GVB3 256 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 TUBAL3A6NHL2 446 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 K7EQG2 157 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 NDUFAB1O14561 156 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 AIM2O14862 343 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 PHF1O43189 567 aaPredicted RBP3.71□□□□□ -1.82
LINC00254-201ENST00000563416 CHP2O43745 196 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 IFNA14P01570 189 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 THY1P04216 161 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 HSD17B1P14061 328 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 KDELR2P33947 212 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 UGT2B10P36537 528 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 GSK3BP49841 420 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 CTBP2P56545 445 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 OR2B6P58173 313 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 PSME3P61289 254 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 NCALDP61601 193 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 SELENOWP63302 87 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 HOXC5Q00444 222 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 TLE4Q04727 773 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 LIPEQ05469 1076 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 RIPPLY1Q0D2K3 151 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 BNIP2Q12982 314 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 RAB35Q15286 201 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 OR1Q1Q15612 314 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 C1orf140Q5VVS0 124 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 SLX4IPQ5VYV7 408 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 WDR25Q64LD2 544 aaPredicted RBP3.71□□□□□ -1.82
LINC00254-201ENST00000563416 BAIAP2L2Q6UXY1 529 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 STAC2Q6ZMT1 411 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 Q6ZT83 130 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 NUFIP2Q7Z417 695 aaKnown RBP3.71□□□□□ -1.82
LINC00254-201ENST00000563416 RBM45Q8IUH3 476 aaKnown RBP3.71□□□□□ -1.82
LINC00254-201ENST00000563416 PGAM4Q8N0Y7 254 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 OR52E4Q8NGH9 312 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 OR1L4Q8NGR5 311 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 MFSD8Q8NHS3 518 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 RHOXF1Q8NHV9 184 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 ADAMTS16Q8TE57 1224 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 NABP1Q96AH0 204 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 TNFRSF13CQ96RJ3 184 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 CCT8L2Q96SF2 557 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 MCHR1Q99705 422 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 SLC6A7Q99884 636 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 BCL7BQ9BQE9 202 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 PRSS27Q9BQR3 290 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 POLR2J2Q9GZM3 115 aaKnown RBP3.71□□□□□ -1.82
LINC00254-201ENST00000563416 POLR2J3Q9H1A7 115 aaKnown RBP3.71□□□□□ -1.82
LINC00254-201ENST00000563416 AUNIPQ9H7T9 357 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 SLC17A5Q9NRA2 495 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 EMC3Q9P0I2 261 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 MGAT4AQ9UM21 535 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 TIMM10BQ9Y5J6 103 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 GMPPBQ9Y5P6 360 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 FLVCR1Q9Y5Y0 555 aa3.71□□□□□ -1.82
LINC00254-201ENST00000563416 HIVEP1P15822 2718 aa3.7□□□□□ -1.82
LINC00254-201ENST00000563416 TRAV36DV7A0A075B6V5 113 aa3.7□□□□□ -1.82
LINC00254-201ENST00000563416 IGHV3-16A0A0C4DH30 117 aa3.7□□□□□ -1.82
LINC00254-201ENST00000563416 LRP5LA4QPB2 252 aa3.7□□□□□ -1.82
LINC00254-201ENST00000563416 TRAPPC13A5PLN9 417 aa3.7□□□□□ -1.82
LINC00254-201ENST00000563416 CPSF4LA6NMK7 179 aaKnown RBP3.7□□□□□ -1.82
LINC00254-201ENST00000563416 G3V4G9 280 aa3.7□□□□□ -1.82
LINC00254-201ENST00000563416 CXCR6O00574 342 aa3.7□□□□□ -1.82
LINC00254-201ENST00000563416 GPR171O14626 319 aa3.7□□□□□ -1.82
LINC00254-201ENST00000563416 OR2T1O43869 369 aa3.7□□□□□ -1.82
LINC00254-201ENST00000563416 VAMP5O95183 116 aa3.7□□□□□ -1.82
LINC00254-201ENST00000563416 OR5F1O95221 314 aa3.7□□□□□ -1.82
LINC00254-201ENST00000563416 AHSA1O95433 338 aa3.7□□□□□ -1.82
LINC00254-201ENST00000563416 IGF2P01344 180 aa3.7□□□□□ -1.82
LINC00254-201ENST00000563416 BGLAPP02818 100 aa3.7□□□□□ -1.82
LINC00254-201ENST00000563416 IGFBP1P08833 259 aaPredicted RBP3.7□□□□□ -1.82
LINC00254-201ENST00000563416 GGT1P19440 569 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms