RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 RCC2Q9P258 522 aaKnown RBP15.29■□□□□ 0.04
COMMD4-208ENST00000563220 ADGRG4Q8IZF6 3080 aa15.28■□□□□ 0.04
COMMD4-208ENST00000563220 FAM221AA4D161 298 aa15.28■□□□□ 0.04
COMMD4-208ENST00000563220 PEX14O75381 377 aa15.28■□□□□ 0.04
COMMD4-208ENST00000563220 ACAA1P09110 424 aaPredicted RBP15.28■□□□□ 0.04
COMMD4-208ENST00000563220 AMY2BP19961 511 aa15.28■□□□□ 0.04
COMMD4-208ENST00000563220 TBPP20226 339 aa15.28■□□□□ 0.04
COMMD4-208ENST00000563220 RBMXP38159 391 aaKnown RBP15.28■□□□□ 0.04
COMMD4-208ENST00000563220 GMFBP60983 142 aa15.28■□□□□ 0.04
COMMD4-208ENST00000563220 HOXA4Q00056 320 aaPredicted RBP15.28■□□□□ 0.04
COMMD4-208ENST00000563220 IKZF1Q13422 519 aa15.28■□□□□ 0.04
COMMD4-208ENST00000563220 IL13RA2Q14627 380 aa15.28■□□□□ 0.04
COMMD4-208ENST00000563220 OR13C8Q8NGS7 320 aa15.28■□□□□ 0.04
COMMD4-208ENST00000563220 PRR7Q8TB68 274 aa15.28■□□□□ 0.04
COMMD4-208ENST00000563220 ZNF442Q9H7R0 627 aa15.28■□□□□ 0.04
COMMD4-208ENST00000563220 UFSP2Q9NUQ7 469 aa15.28■□□□□ 0.04
COMMD4-208ENST00000563220 PLEKHA6Q9Y2H5 1048 aa15.28■□□□□ 0.04
COMMD4-208ENST00000563220 KALRNO60229 2985 aa15.27■□□□□ 0.04
COMMD4-208ENST00000563220 DISC1C4P0D8 188 aa15.27■□□□□ 0.04
COMMD4-208ENST00000563220 NOS1APO75052 506 aaPredicted RBP15.27■□□□□ 0.04
COMMD4-208ENST00000563220 PMELP40967 661 aa15.27■□□□□ 0.04
COMMD4-208ENST00000563220 SCGB2B2Q4G0G5 96 aa15.27■□□□□ 0.04
COMMD4-208ENST00000563220 SPRNQ5BIV9 151 aa15.27■□□□□ 0.04
COMMD4-208ENST00000563220 CD276Q5ZPR3 534 aa15.27■□□□□ 0.04
COMMD4-208ENST00000563220 Q8IYB0 196 aa15.27■□□□□ 0.04
COMMD4-208ENST00000563220 CA5BP1Q8WTZ4 195 aa15.27■□□□□ 0.04
COMMD4-208ENST00000563220 GIMAP1Q8WWP7 306 aa15.27■□□□□ 0.04
COMMD4-208ENST00000563220 HYLS1Q96M11 299 aa15.27■□□□□ 0.04
COMMD4-208ENST00000563220 MED28Q9H204 178 aa15.27■□□□□ 0.04
COMMD4-208ENST00000563220 NGBQ9NPG2 151 aa15.27■□□□□ 0.04
COMMD4-208ENST00000563220 SCP2D1Q9UJQ7 156 aa15.27■□□□□ 0.04
COMMD4-208ENST00000563220 ATP23Q9Y6H3 246 aa15.27■□□□□ 0.04
COMMD4-208ENST00000563220 A6NLC8 198 aa15.27■□□□□ 0.03
COMMD4-208ENST00000563220 FCGR3AP08637 254 aa15.27■□□□□ 0.03
COMMD4-208ENST00000563220 ANXA7P20073 488 aaKnown RBP15.27■□□□□ 0.03
COMMD4-208ENST00000563220 CD200P41217 278 aa15.27■□□□□ 0.03
COMMD4-208ENST00000563220 UQCRFS1P47985 274 aa15.27■□□□□ 0.03
COMMD4-208ENST00000563220 SELENOVP59797 346 aa15.27■□□□□ 0.03
COMMD4-208ENST00000563220 VAX1Q5SQQ9 334 aa15.27■□□□□ 0.03
COMMD4-208ENST00000563220 NCMAPQ5T1S8 102 aa15.27■□□□□ 0.03
COMMD4-208ENST00000563220 ADAM5Q6NVV9 412 aa15.27■□□□□ 0.03
COMMD4-208ENST00000563220 Q6P435 159 aa15.27■□□□□ 0.03
COMMD4-208ENST00000563220 WDR82Q6UXN9 313 aa15.27■□□□□ 0.03
COMMD4-208ENST00000563220 Q6ZPA2 131 aa15.27■□□□□ 0.03
COMMD4-208ENST00000563220 LINC00596Q86U02 117 aa15.27■□□□□ 0.03
COMMD4-208ENST00000563220 POC1AQ8NBT0 407 aa15.27■□□□□ 0.03
COMMD4-208ENST00000563220 MRGPRFQ96AM1 343 aa15.27■□□□□ 0.03
COMMD4-208ENST00000563220 ELMOD3Q96FG2 381 aa15.27■□□□□ 0.03
COMMD4-208ENST00000563220 SLC2A8Q9NY64 477 aa15.27■□□□□ 0.03
COMMD4-208ENST00000563220 SMG1Q96Q15 3661 aaKnown RBP15.26■□□□□ 0.03
COMMD4-208ENST00000563220 TRAV24A0A0B4J272 114 aa15.26■□□□□ 0.03
COMMD4-208ENST00000563220 PLSCR5A0PG75 271 aa15.26■□□□□ 0.03
COMMD4-208ENST00000563220 SPRY3O43610 288 aa15.26■□□□□ 0.03
COMMD4-208ENST00000563220 NXPH2O95156 264 aa15.26■□□□□ 0.03
COMMD4-208ENST00000563220 DTYMKP23919 212 aa15.26■□□□□ 0.03
COMMD4-208ENST00000563220 MECP2P51608 486 aaKnown RBP15.26■□□□□ 0.03
COMMD4-208ENST00000563220 ADIPOQQ15848 244 aa15.26■□□□□ 0.03
COMMD4-208ENST00000563220 ST3GAL2Q16842 350 aa15.26■□□□□ 0.03
COMMD4-208ENST00000563220 SUMF2Q8NBJ7 301 aa15.26■□□□□ 0.03
COMMD4-208ENST00000563220 PLPPR2Q96GM1 343 aa15.26■□□□□ 0.03
COMMD4-208ENST00000563220 CHST6Q9GZX3 395 aa15.26■□□□□ 0.03
COMMD4-208ENST00000563220 HES4Q9HCC6 221 aa15.26■□□□□ 0.03
COMMD4-208ENST00000563220 A0A1B0GUH1 482 aa15.25■□□□□ 0.03
COMMD4-208ENST00000563220 HSPB6O14558 160 aa15.25■□□□□ 0.03
COMMD4-208ENST00000563220 HS3ST1O14792 307 aa15.25■□□□□ 0.03
COMMD4-208ENST00000563220 WNT9BO14905 357 aa15.25■□□□□ 0.03
COMMD4-208ENST00000563220 PTBP3O95758 552 aaKnown RBP15.25■□□□□ 0.03
COMMD4-208ENST00000563220 HPXP02790 462 aa15.25■□□□□ 0.03
COMMD4-208ENST00000563220 IFNA6P05013 189 aa15.25■□□□□ 0.03
COMMD4-208ENST00000563220 GNLYP22749 145 aa15.25■□□□□ 0.03
COMMD4-208ENST00000563220 MZT1Q08AG7 82 aa15.25■□□□□ 0.03
COMMD4-208ENST00000563220 ACTBL2Q562R1 376 aa15.25■□□□□ 0.03
COMMD4-208ENST00000563220 DMRTC2Q8IXT2 367 aaPredicted RBP15.25■□□□□ 0.03
COMMD4-208ENST00000563220 OR5AP2Q8NGF4 316 aa15.25■□□□□ 0.03
COMMD4-208ENST00000563220 OR5H2Q8NGV7 314 aa15.25■□□□□ 0.03
COMMD4-208ENST00000563220 PRRT1Q99946 306 aa15.25■□□□□ 0.03
COMMD4-208ENST00000563220 SLC25A21Q9BQT8 299 aaPredicted RBP15.25■□□□□ 0.03
COMMD4-208ENST00000563220 WDR13Q9H1Z4 485 aa15.25■□□□□ 0.03
COMMD4-208ENST00000563220 KCNJ16Q9NPI9 418 aa15.25■□□□□ 0.03
COMMD4-208ENST00000563220 NDRG3Q9UGV2 375 aa15.25■□□□□ 0.03
COMMD4-208ENST00000563220 EDARQ9UNE0 448 aa15.25■□□□□ 0.03
COMMD4-208ENST00000563220 SHISA9B4DS77 424 aa15.25■□□□□ 0.03
COMMD4-208ENST00000563220 SDCBPO00560 298 aaPredicted RBP15.25■□□□□ 0.03
COMMD4-208ENST00000563220 DEGS1O15121 323 aa15.25■□□□□ 0.03
COMMD4-208ENST00000563220 TPD52L2O43399 206 aaKnown RBP15.25■□□□□ 0.03
COMMD4-208ENST00000563220 OR4A8P0C604 315 aa15.25■□□□□ 0.03
COMMD4-208ENST00000563220 VSIG10L2P0DP72 767 aa15.25■□□□□ 0.03
COMMD4-208ENST00000563220 ZNF146Q15072 292 aa15.25■□□□□ 0.03
COMMD4-208ENST00000563220 FCN2Q15485 313 aa15.25■□□□□ 0.03
COMMD4-208ENST00000563220 RDH5Q92781 318 aa15.25■□□□□ 0.03
COMMD4-208ENST00000563220 MEGF10Q96KG7 1140 aa15.25■□□□□ 0.03
COMMD4-208ENST00000563220 OR2V2Q96R30 315 aa15.25■□□□□ 0.03
COMMD4-208ENST00000563220 OR51J1Q9H342 316 aa15.25■□□□□ 0.03
COMMD4-208ENST00000563220 ESRP2Q9H6T0 727 aaKnown RBP15.25■□□□□ 0.03
COMMD4-208ENST00000563220 IFT22Q9H7X7 185 aa15.25■□□□□ 0.03
COMMD4-208ENST00000563220 C1orf123Q9NWV4 160 aa15.25■□□□□ 0.03
COMMD4-208ENST00000563220 OR2AT4A6NND4 320 aa15.24■□□□□ 0.03
COMMD4-208ENST00000563220 MCRIP1C9JLW8 97 aa15.24■□□□□ 0.03
COMMD4-208ENST00000563220 RLN1P04808 185 aa15.24■□□□□ 0.03
COMMD4-208ENST00000563220 ZNF81P51508 661 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms