RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 PRICKLE4Q2TBC4 344 aa8.19□□□□□ -1.1
CDH1-205ENST00000562836 PRRT2Q7Z6L0 340 aaPredicted RBP8.19□□□□□ -1.1
CDH1-205ENST00000562836 TMEM217Q8N7C4 229 aa8.19□□□□□ -1.1
CDH1-205ENST00000562836 NKD1Q969G9 470 aa8.19□□□□□ -1.1
CDH1-205ENST00000562836 MYADMQ96S97 322 aa8.19□□□□□ -1.1
CDH1-205ENST00000562836 LRRC61Q9BV99 259 aa8.19□□□□□ -1.1
CDH1-205ENST00000562836 SH2D2AQ9NP31 389 aa8.19□□□□□ -1.1
CDH1-205ENST00000562836 NOX4Q9NPH5 578 aa8.19□□□□□ -1.1
CDH1-205ENST00000562836 VDAC3Q9Y277 283 aa8.19□□□□□ -1.1
CDH1-205ENST00000562836 ZNF443Q9Y2A4 671 aaPredicted RBP8.19□□□□□ -1.1
CDH1-205ENST00000562836 CENPVL1A0A0U1RR11 272 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 CENPVL3A0A0U1RRI6 287 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 LIPT2A6NK58 231 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 CCDC179H3BU77 68 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 TIMM8AO60220 97 aaPredicted RBP8.18□□□□□ -1.1
CDH1-205ENST00000562836 TIAF1O95411 115 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 PMS2P2O95744 297 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 PIPP12273 146 aaPredicted RBP8.18□□□□□ -1.1
CDH1-205ENST00000562836 CD99P14209 185 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 RPL7P18124 248 aaKnown RBP8.18□□□□□ -1.1
CDH1-205ENST00000562836 ADRA1AP35348 466 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 MDH2P40926 338 aaKnown RBP8.18□□□□□ -1.1
CDH1-205ENST00000562836 SLC6A12P48065 614 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 SNRPFP62306 86 aaKnown RBP8.18□□□□□ -1.1
CDH1-205ENST00000562836 HBMQ6B0K9 141 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 TMEM25Q86YD3 366 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 C20orf196Q8IYI0 205 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 OSR2Q8N2R0 312 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 SMIM4Q8WVI0 70 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 NEIL2Q969S2 332 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 PPCDCQ96CD2 204 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 DCBLD2Q96PD2 775 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 ACCSQ96QU6 501 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 SRD5A3Q9H8P0 318 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 ZDHHC11Q9H8X9 412 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 IGLV3-22A0A075B6J6 115 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 GAGE12JA6NER3 117 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 ANKRD30BLA7E2S9 258 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 GABARAPH6UMI1 98 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 KIR2DS3K7RE56 304 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 M0R2Z0 102 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 ETV2O00321 342 aaPredicted RBP8.18□□□□□ -1.1
CDH1-205ENST00000562836 GAGE7O76087 117 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 GAGE12FP0CL80 117 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 GAGE12GP0CL81 117 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 GAGE12IP0CL82 117 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 FABP6P51161 128 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 POLR2JP52435 117 aaKnown RBP8.18□□□□□ -1.1
CDH1-205ENST00000562836 TAS2R19P59542 299 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 GAGE4Q13068 117 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 KIR2DS3Q14952 304 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 SYPL1Q16563 259 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 UPP1Q16831 310 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 TCEAL5Q5H9L2 206 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 C1orf220Q5T0J3 134 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 FAM182BQ5T319 152 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 SMIM5Q71RC9 77 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 BHLHA9Q7RTU4 235 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 DEFB125Q8N687 156 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 MRAPQ8TCY5 172 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 IGSF8Q969P0 613 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 FLYWCH2Q96CP2 140 aaKnown RBP8.18□□□□□ -1.1
CDH1-205ENST00000562836 CABLES2Q9BTV7 478 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 NRN1Q9NPD7 142 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 MARCH2Q9P0N8 246 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 MARCH4Q9P2E8 410 aaPredicted RBP8.18□□□□□ -1.1
CDH1-205ENST00000562836 HS3ST4Q9Y661 456 aa8.18□□□□□ -1.1
CDH1-205ENST00000562836 TNRC6AQ8NDV7 1962 aaKnown RBP8.17□□□□□ -1.1
CDH1-205ENST00000562836 A0A0U1RRA0 63 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 ZNF816-ZNF321PA0A0X1KG74 233 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 A0A1B0GW64 132 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 RAMP2O60895 175 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 HBZP02008 142 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 PF4P02776 101 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 SLC6A9P48067 706 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 MPV17L2Q567V2 206 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 CLEC12AQ5QGZ9 265 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 OLFML2AQ68BL7 652 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 ENPP7Q6UWV6 458 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 ZNF534Q76KX8 674 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 CENPVQ7Z7K6 275 aaPredicted RBP8.17□□□□□ -1.1
CDH1-205ENST00000562836 UMODL1-AS1Q8N2C9 162 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 OR4K17Q8NGC6 315 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 OR1L4Q8NGR5 311 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 SAP25Q8TEE9 199 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 SLC25A38Q96DW6 304 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 OR5V1Q9UGF6 321 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 WASHC3Q9Y3C0 194 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 LOC107984640A0A0U1RRK4 108 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 CLDN5O00501 218 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 TMEM50AO95807 157 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 HRASP01112 189 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 KRASP01116 189 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 GPD1P21695 349 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 TACR1P25103 407 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 SULT1A2P50226 295 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 CATR1Q13166 79 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 LEG1Q6P5S2 330 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 C1orf174Q8IYL3 243 aa8.17□□□□□ -1.1
CDH1-205ENST00000562836 OR4A16Q8NH70 328 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms