RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 DAZAP2Q15038 168 aaPredicted RBP12.07□□□□□ -0.48
COMMD4-205ENST00000562310 MPPED2Q15777 294 aa12.07□□□□□ -0.48
COMMD4-205ENST00000562310 RNASE10Q5GAN6 216 aaKnown RBP12.07□□□□□ -0.48
COMMD4-205ENST00000562310 ACP7Q6ZNF0 438 aa12.07□□□□□ -0.48
COMMD4-205ENST00000562310 RTN4RL2Q86UN3 420 aa12.07□□□□□ -0.48
COMMD4-205ENST00000562310 HOGA1Q86XE5 327 aa12.07□□□□□ -0.48
COMMD4-205ENST00000562310 OR4C16Q8NGL9 310 aa12.07□□□□□ -0.48
COMMD4-205ENST00000562310 OR11L1Q8NGX0 322 aa12.07□□□□□ -0.48
COMMD4-205ENST00000562310 Q8TCH9 128 aa12.07□□□□□ -0.48
COMMD4-205ENST00000562310 LRRC29Q8WV35 223 aa12.07□□□□□ -0.48
COMMD4-205ENST00000562310 HPS1Q92902 700 aa12.07□□□□□ -0.48
COMMD4-205ENST00000562310 FAAP24Q9BTP7 215 aa12.07□□□□□ -0.48
COMMD4-205ENST00000562310 CACNG6Q9BXT2 260 aa12.07□□□□□ -0.48
COMMD4-205ENST00000562310 MS4A5Q9H3V2 200 aa12.07□□□□□ -0.48
COMMD4-205ENST00000562310 RIMS4Q9H426 269 aaPredicted RBP12.07□□□□□ -0.48
COMMD4-205ENST00000562310 SEBOXQ9HB31 216 aaPredicted RBP12.07□□□□□ -0.48
COMMD4-205ENST00000562310 MCUBQ9NWR8 336 aa12.07□□□□□ -0.48
COMMD4-205ENST00000562310 CISD1Q9NZ45 108 aaKnown RBP12.07□□□□□ -0.48
COMMD4-205ENST00000562310 NLKQ9UBE8 527 aa12.07□□□□□ -0.48
COMMD4-205ENST00000562310 AK3Q9UIJ7 227 aa12.07□□□□□ -0.48
COMMD4-205ENST00000562310 NPTNQ9Y639 398 aa12.07□□□□□ -0.48
COMMD4-205ENST00000562310 SMG1Q96Q15 3661 aaKnown RBP12.07□□□□□ -0.48
COMMD4-205ENST00000562310 IGHV3-64DA0A0J9YX35 117 aa12.06□□□□□ -0.48
COMMD4-205ENST00000562310 POM121CA8CG34 1229 aa12.06□□□□□ -0.48
COMMD4-205ENST00000562310 DISC1C4P0D8 188 aa12.06□□□□□ -0.48
COMMD4-205ENST00000562310 DEGS1O15121 323 aa12.06□□□□□ -0.48
COMMD4-205ENST00000562310 CD3DP04234 171 aa12.06□□□□□ -0.48
COMMD4-205ENST00000562310 ZNF44P15621 663 aa12.06□□□□□ -0.48
COMMD4-205ENST00000562310 IGFBP2P18065 325 aa12.06□□□□□ -0.48
COMMD4-205ENST00000562310 AMY2BP19961 511 aa12.06□□□□□ -0.48
COMMD4-205ENST00000562310 GIFP27352 417 aa12.06□□□□□ -0.48
COMMD4-205ENST00000562310 SNRPD2P62316 118 aaKnown RBP12.06□□□□□ -0.48
COMMD4-205ENST00000562310 SHEQ5VZ18 495 aa12.06□□□□□ -0.48
COMMD4-205ENST00000562310 ZNF826PQ6ZT77 177 aa12.06□□□□□ -0.48
COMMD4-205ENST00000562310 MOGAT3Q86VF5 341 aa12.06□□□□□ -0.48
COMMD4-205ENST00000562310 FBXW5Q969U6 566 aa12.06□□□□□ -0.48
COMMD4-205ENST00000562310 HS3ST6Q96QI5 342 aa12.06□□□□□ -0.48
COMMD4-205ENST00000562310 MARVELD1Q9BSK0 173 aa12.06□□□□□ -0.48
COMMD4-205ENST00000562310 ZNF701Q9NV72 531 aaPredicted RBP12.06□□□□□ -0.48
COMMD4-205ENST00000562310 IL36RNQ9UBH0 155 aa12.06□□□□□ -0.48
COMMD4-205ENST00000562310 TANC2Q9HCD6 1990 aa12.05□□□□□ -0.48
COMMD4-205ENST00000562310 hCG_2014768A0A024R1R8 64 aa12.05□□□□□ -0.48
COMMD4-205ENST00000562310 H7C1Q1 480 aa12.05□□□□□ -0.48
COMMD4-205ENST00000562310 IFNL4K9M1U5 179 aa12.05□□□□□ -0.48
COMMD4-205ENST00000562310 HAND1O96004 215 aa12.05□□□□□ -0.48
COMMD4-205ENST00000562310 TCRBP04435 133 aa12.05□□□□□ -0.48
COMMD4-205ENST00000562310 FCGR3AP08637 254 aa12.05□□□□□ -0.48
COMMD4-205ENST00000562310 IRF2P14316 349 aa12.05□□□□□ -0.48
COMMD4-205ENST00000562310 HLA-DMAP28067 261 aa12.05□□□□□ -0.48
COMMD4-205ENST00000562310 RAG2P55895 527 aa12.05□□□□□ -0.48
COMMD4-205ENST00000562310 BTG1P62324 171 aa12.05□□□□□ -0.48
COMMD4-205ENST00000562310 VAX1Q5SQQ9 334 aa12.05□□□□□ -0.48
COMMD4-205ENST00000562310 RSBN1Q5VWQ0 802 aaPredicted RBP12.05□□□□□ -0.48
COMMD4-205ENST00000562310 Q6P435 159 aa12.05□□□□□ -0.48
COMMD4-205ENST00000562310 ZNF782Q6ZMW2 699 aaPredicted RBP12.05□□□□□ -0.48
COMMD4-205ENST00000562310 BTN2A1Q7KYR7 527 aa12.05□□□□□ -0.48
COMMD4-205ENST00000562310 GVQW1Q8N7I0 195 aa12.05□□□□□ -0.48
COMMD4-205ENST00000562310 SUMF2Q8NBJ7 301 aa12.05□□□□□ -0.48
COMMD4-205ENST00000562310 BEST4Q8NFU0 473 aa12.05□□□□□ -0.48
COMMD4-205ENST00000562310 OR4K15Q8NH41 348 aa12.05□□□□□ -0.48
COMMD4-205ENST00000562310 NEK7Q8TDX7 302 aa12.05□□□□□ -0.48
COMMD4-205ENST00000562310 NEUROG1Q92886 237 aa12.05□□□□□ -0.48
COMMD4-205ENST00000562310 SNAPC3Q92966 411 aa12.05□□□□□ -0.48
COMMD4-205ENST00000562310 PRRT1Q99946 306 aa12.05□□□□□ -0.48
COMMD4-205ENST00000562310 DPCDQ9BVM2 203 aaPredicted RBP12.05□□□□□ -0.48
COMMD4-205ENST00000562310 MMP28Q9H239 520 aa12.05□□□□□ -0.48
COMMD4-205ENST00000562310 SLC2A8Q9NY64 477 aa12.05□□□□□ -0.48
COMMD4-205ENST00000562310 TREM2Q9NZC2 230 aa12.05□□□□□ -0.48
COMMD4-205ENST00000562310 ZNF581Q9P0T4 197 aa12.05□□□□□ -0.48
COMMD4-205ENST00000562310 RNF7Q9UBF6 113 aa12.05□□□□□ -0.48
COMMD4-205ENST00000562310 SCP2D1Q9UJQ7 156 aa12.05□□□□□ -0.48
COMMD4-205ENST00000562310 TRAV24A0A0B4J272 114 aa12.04□□□□□ -0.48
COMMD4-205ENST00000562310 UBE2QL1A1L167 161 aa12.04□□□□□ -0.48
COMMD4-205ENST00000562310 LRRC30A6NM36 301 aa12.04□□□□□ -0.48
COMMD4-205ENST00000562310 OR2H2O95918 312 aa12.04□□□□□ -0.48
COMMD4-205ENST00000562310 PLAUP00749 431 aa12.04□□□□□ -0.48
COMMD4-205ENST00000562310 AMY2AP04746 511 aa12.04□□□□□ -0.48
COMMD4-205ENST00000562310 DUSP1P28562 367 aa12.04□□□□□ -0.48
COMMD4-205ENST00000562310 KCNJ3P48549 501 aa12.04□□□□□ -0.48
COMMD4-205ENST00000562310 RBMS2Q15434 407 aaKnown RBP12.04□□□□□ -0.48
COMMD4-205ENST00000562310 SRSF7Q16629 238 aaKnown RBP eCLIP12.04□□□□□ -0.48
COMMD4-205ENST00000562310 PAN3Q58A45 887 aaKnown RBP12.04□□□□□ -0.48
COMMD4-205ENST00000562310 Q6ZS49 121 aa12.04□□□□□ -0.48
COMMD4-205ENST00000562310 MOB1BQ7L9L4 216 aa12.04□□□□□ -0.48
COMMD4-205ENST00000562310 MUC15Q8N387 334 aa12.04□□□□□ -0.48
COMMD4-205ENST00000562310 ARRDC1Q8N5I2 433 aa12.04□□□□□ -0.48
COMMD4-205ENST00000562310 OR4S1Q8NGB4 309 aa12.04□□□□□ -0.48
COMMD4-205ENST00000562310 OR5H2Q8NGV7 314 aa12.04□□□□□ -0.48
COMMD4-205ENST00000562310 OR56B4Q8NH76 319 aa12.04□□□□□ -0.48
COMMD4-205ENST00000562310 LILRB1Q8NHL6 650 aaPredicted RBP12.04□□□□□ -0.48
COMMD4-205ENST00000562310 UPRTQ96BW1 309 aa12.04□□□□□ -0.48
COMMD4-205ENST00000562310 SAP30LQ9HAJ7 183 aa12.04□□□□□ -0.48
COMMD4-205ENST00000562310 ZNF286AQ9HBT8 521 aa12.04□□□□□ -0.48
COMMD4-205ENST00000562310 CHMP1AQ9HD42 196 aaPredicted RBP12.04□□□□□ -0.48
COMMD4-205ENST00000562310 GCM1Q9NP62 436 aa12.04□□□□□ -0.48
COMMD4-205ENST00000562310 DECR2Q9NUI1 292 aa12.04□□□□□ -0.48
COMMD4-205ENST00000562310 NUDT15Q9NV35 164 aa12.04□□□□□ -0.48
COMMD4-205ENST00000562310 PPP1R3CQ9UQK1 317 aa12.04□□□□□ -0.48
COMMD4-205ENST00000562310 KLF2Q9Y5W3 355 aaPredicted RBP12.04□□□□□ -0.48
COMMD4-205ENST00000562310 KALRNO60229 2985 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms