RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 SFRP2Q96HF1 295 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 SLC45A3Q96JT2 553 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 OR5B12Q96R08 314 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 OPRPNQ99935 248 aaPredicted RBP3.32□□□□□ -1.88
LRRC28-222ENST00000561431 AIF1LQ9BQI0 150 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 C2orf88Q9BSF0 95 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 DCTN5Q9BTE1 182 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 ULBP3Q9BZM4 244 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 NXF5Q9H1B4 397 aaKnown RBP3.32□□□□□ -1.88
LRRC28-222ENST00000561431 SPNS1Q9H2V7 528 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 SRMSQ9H3Y6 488 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 FAM60AQ9NP50 221 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 SPANXB1Q9NS25 103 aaPredicted RBP3.32□□□□□ -1.88
LRRC28-222ENST00000561431 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.32□□□□□ -1.88
LRRC28-222ENST00000561431 BFARQ9NZS9 450 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 MDFICQ9P1T7 246 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 ZNF319Q9P2F9 582 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 GALPQ9UBC7 116 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 PCYOX1Q9UHG3 505 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 RCL1Q9Y2P8 373 aaKnown RBP3.32□□□□□ -1.88
LRRC28-222ENST00000561431 GOLGA4Q13439 2230 aaKnown RBP3.32□□□□□ -1.88
LRRC28-222ENST00000561431 ZNF462Q96JM2 2506 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 BOD1L1Q8NFC6 3051 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 ATRXP46100 2492 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 A0A087X002 238 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 A0A0J9YY10 115 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 TVP23AA6NH52 213 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 OR11H12B2RN74 326 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 TSTD3H0UI37 97 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 SIGLEC5O15389 551 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 PRKYO43930 277 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 EIF1BO60739 113 aaKnown RBP3.31□□□□□ -1.88
LRRC28-222ENST00000561431 SCRG1O75711 98 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 ATP5LO75964 103 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 OR2B3O76000 313 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 C1orf105O95561 183 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 CA1P00915 261 aaPredicted RBP3.31□□□□□ -1.88
LRRC28-222ENST00000561431 BCHEP06276 602 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 ERGP11308 486 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 ZNF17P17021 662 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 TCP1P17987 556 aaKnown RBP3.31□□□□□ -1.88
LRRC28-222ENST00000561431 GCAP28676 217 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 GPR183P32249 361 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 EIF1P41567 113 aaKnown RBP3.31□□□□□ -1.88
LRRC28-222ENST00000561431 BDKRB1P46663 353 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 CRYBA4P53673 196 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 TAS2R39P59534 338 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 ESRRGP62508 458 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 ZNF45Q02386 682 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 ABRAXAS2Q15018 415 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 TAL2Q16559 108 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 LRRC36Q1X8D7 754 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 MRGPRG-AS1Q2M3A8 158 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 CEACAM21Q3KPI0 293 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 SPIN4Q56A73 249 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 C1orf189Q5VU69 101 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 Q6ZRP5 223 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 CMTM1Q8IZ96 169 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 OR6V1Q8N148 313 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 ABHD12Q8N2K0 398 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 CENPSQ8N2Z9 138 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 MREGQ8N565 214 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 MS4A15Q8N5U1 240 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 OR11H1Q8NG94 326 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 OR11H2Q8NH07 326 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 AENQ8WTP8 325 aaKnown RBP3.31□□□□□ -1.88
LRRC28-222ENST00000561431 CT55Q8WUE5 264 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 RNF138Q8WVD3 245 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 SMIM19Q96E16 107 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 CNRIP1Q96F85 164 aaPredicted RBP3.31□□□□□ -1.88
LRRC28-222ENST00000561431 ZBED6CLQ96FA7 236 aaPredicted RBP3.31□□□□□ -1.88
LRRC28-222ENST00000561431 POM121L2Q96KW2 1035 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 CAPZA3Q96KX2 299 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 LINC00479Q96M42 142 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 TMEM56Q96MV1 263 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 ZNF300Q96RE9 604 aaPredicted RBP3.31□□□□□ -1.88
LRRC28-222ENST00000561431 CLCC1Q96S66 551 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 RNF2Q99496 336 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 APOL4Q9BPW4 351 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 HCAR1Q9BXC0 346 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 ARL6Q9H0F7 186 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 ALG9Q9H6U8 611 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 TMEM27Q9HBJ8 222 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 ISYNA1Q9NPH2 558 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 FBXO6Q9NRD1 293 aaPredicted RBP3.31□□□□□ -1.88
LRRC28-222ENST00000561431 KLK11Q9UBX7 282 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 GNPTGQ9UJJ9 305 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 RARRES3Q9UL19 164 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 ASF1AQ9Y294 204 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 AK6Q9Y3D8 172 aaKnown RBP3.31□□□□□ -1.88
LRRC28-222ENST00000561431 TMEM56-RWDD3S4R434 201 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 CACNA1GO43497 2377 aa3.31□□□□□ -1.88
LRRC28-222ENST00000561431 PIEZO2Q9H5I5 2752 aa3.3□□□□□ -1.88
LRRC28-222ENST00000561431 HELZ2Q9BYK8 2649 aaKnown RBP3.3□□□□□ -1.88
LRRC28-222ENST00000561431 URB1O60287 2271 aaKnown RBP3.3□□□□□ -1.88
LRRC28-222ENST00000561431 TRAV8-7A0A075B6U6 113 aa3.3□□□□□ -1.88
LRRC28-222ENST00000561431 IGKV1-8A0A0C4DH67 115 aa3.3□□□□□ -1.88
LRRC28-222ENST00000561431 A0A1B0GU03 582 aa3.3□□□□□ -1.88
LRRC28-222ENST00000561431 NDUFAF8A1L188 74 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms